mRNA_P-littoralis_Contig182.87.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: D8LLY0_ECTSI (WD-40 repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY0_ECTSI) HSP 1 Score: 1552 bits (4018), Expect = 0.000e+0 Identity = 1033/1991 (51.88%), Postives = 1193/1991 (59.92%), Query Frame = 2
Query: 1310 RFPTTVASKRVLGRQTVWVTLRERPPRVPPATLFAANRLKPRKRNFDTVERTGLFAKALKVGDWAEAAMMLSSTAKLQFGKVNAAGAAEVTDEIRKVLGRNISVH----AGLSERTKNQKKXXXXXXXXXXXXXXXXXXXXXXXXXGGG----NDKC---------------YRTNGESGSRGDKAG-----------GKERWKRQ-------------------------------------------RRDQR---RPRSTGAHSPRKHVPKRRRRKERGGS------------------------------------------VTNDRSSGEKEMAERRVLVEKDVRAELAQLKRLKAARVASWKELGEATGLLSLAKVRKRNKAREKGESKGLLDSAGITVPDPKMHLKVLVWDGHFGADAKEMRMPLPELYPTSSTPYDQNEDFEARTLGEAIAVGDKAAPALIEEMRAEKGRKYDTVGKMVDAVLVRDRRLRKVGVRRRDAIARPLDLAAAFSTPDVRLAPLPHHRHPLDMNGEDQDDDDEAADGRVVTTATRHRQSGAEEGPAPEIEATLASGTKEGLLLLTAGXXXPRXXXKHDDDADEHRGSRTSTHARENENNQA--------EGKGNEKKDGQAEQERVRSKALTKNGDXXXXXXXXXXXXXXXXMTPALPPLQASIVHAKLEGTASREQRQKQQERLARRPPPVDPPGDVDLVRRRGGLGLIPGGASLVKVPTVGDWEKEVARENGGLLRELETRSGGLVCHQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNAVRLLTGKHDGLPVWDVAWSGDSMFLISCGADRSVVIWNTAAAEPFVRRFLGHADHVKRCAFADTRGEAVLSCGSDGTIRKWVLTPNVPAPPPKPFVTHKTRTWVMLNWRPAAGSNEQLTAYVVSWRLGRKGKFDDELTVAGDQLRRDVTGLLPGSLYFFRVAGVNRMGQGPWSETSDMVDTEMDLPLAMDRPDTEAVTTESITVSFFAPRPTLPKMKIQRFVLQAKGAGQDFDEGESQEFSWDEAIAGAASLRGKERRHARAQREPIVSIARTRSVASLSATGWKVGTGGTAGHSGGGSTENGSVSVVSLGSFAGS---------DAIAEM-------------------------------------------------------------------------------------------GQPSTAGAVDGRAAETP------AAXXXXXXXXVSDDKQSGSVGIVRLRSFAAGNIENIETKITPTEETGDTVTVGQGSDDNNSNSTAAGAVEKTGVVFPTRGIKAGKGGGRVQGGYSQLVRRGSFARRSTRVGRVEHKLRKSQRHRRKAHHYLMSLTYRGLRPGMEYHIRVAGISSVGQGAFSVQTFSARTPAVRPRACPPPTASSVCLTTITISWAEGDDGGSSVTGFALRPTGGGEAEEVSVSRTKRAHVFEDLEKGHTYSFQVRAANNEGIGPWSEPSQPVRTLTERPSAPRSPAISLARPPPGPLSLWLSIFLPDEDGGDPVTAILLETRRHGGTQPPQWFRCERHPVPAAL-RANQKGAEHGSTTATAIRKHGGREGDTFGHRRVGGGTGASTGAGAGAVC----VPSTARTATTKACCEIIVHVDDLQPRTYYSFRASAVNAQGAGDPGPPCRRVRTSAPQPPSWALAHNTMNPIITNVTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAACSGLGACTVLWTEPFSNGAAIELYEVEVVRLGSQVFSLSVEATGQG-------------------KEDEGID-DEKDGDDNGVNDRNGHNPAAASKVAGPKMKNMKNEESNRTATAPXXXXXXXXXLEVLVLPATQRAERGKTEERARQGRGGVVREVMQRFHRSVPSHMKHLVIRGLTTDCDYVFRVAARNEAGMGEAGPWTQVVRVVDPANE 6499
RFPT VASK VLGR+TVWVTLRERPP PPA +FAA RLKPRKR FDTV RTG+FAKALK GDWAEA MMLS AKLQF KV A GA EV DEIRKVLGRNI+VH G++ + XXXXXXXXXXXXXXXXXXXXX GG N K + G GS G A GKE+ K R+ R R TG E GGS D SS ++E R VEK+VRAELA L RL+AA VASWKELG A GLLSLAK RKR+K R KG+SKGLLD+AGITV DPK+ LKVLVWDG FGAD KEMRM LPELYP++STPYDQNEDF ARTLGEAIAVGD+AAPALIEEMRAEK +K D GKMV+AVL RD++LR+VG RRR+A+ P DLAA+F PD R+APL H+ P+D NGE++D T H++ G +EG E+T ++ +KE L K DD +++ G R T A E E+ G E+ + A T+ D +T LPPL+ S+ HAKLEGTASRE+R K+++RLA++ PP DPPGDVDL RRRGGL ELETR GGL+CHQD IN VSYSPDGRRLA+ASSDGT+KLWDPS+GKQ VR+LTG H+GLPVWDVAWSGDSMFL+SC ADRS+VIWNTAAAEPFVRRFLGH+DHVKRCAFADTRG+AVLSCGSDGT+RKWVLTPNVPAPPPKPFVTHKTRTWVMLNWRPAAGSNEQ+TAYVVSWRLGRKGKFDDELTVAGDQLRRDVTGLLPGSLYFFRVAGVNRMGQGPWSE +DMVDTEMDLPLAM+RP+ EAVT SI +SFFAPRPTLPKMKIQ FVLQAKG G DFDE ++QEF+W EA+AGAA+LRGKER HA QR+ IVSI+R+RSV S++ TG + GS+E+G V + +GSFA + + IAE G +T G V A + A SDD+Q GSV IV+ SFA GNI ET+ + T QG++ T AG E+ + +G+G Q G + VR +FARR+TR+GRV+HKLR+ QR RRKAHHYLMSLTY GL+PGM+YHIRVAGISSVGQGAFSV TFSARTP+VRP ACPPPTASS+ LT I ISWAEGDDGGSS+TGF LRP GGG+AEE+SV R KR+++ E L KGHTY FQVRAANNEGIGPWSEPSQPVRTLTERPS PR+PA+S++ PPPGPLSLWLS+FLPDEDGGDPVTA+LLETRRHGGTQPP+W RCERHPVP+ + + NQ G+ ST+A + GG GD GG AG G + +P + R A + CCEI+V V+ LQPRTYYSFRASAVNA+GA DPGPPCRR RTSAP+PPSW LA + +N T RAA SGLGACTV W EPFSNGAA+E Y+VEVV LG +V +V G KE+EG D K G NG+ + + M K +E + T XXXXXXXXX V+VLPA Q R+G G VVREV +RF R VPSH++HLVIRGL T DYVFRV+A N AGMGE+GPWT+VVRVVDPA+E
Sbjct: 569 RFPTIVASKSVLGRETVWVTLRERPPPTPPAAIFAATRLKPRKRLFDTVARTGVFAKALKAGDWAEATMMLSVAAKLQFSKVKATGATEVADEIRKVLGRNIAVHNARSVGVAWTSVCVSHEPPDXXXXXXXXXXXXXXXXXXXXXXGGKKHPNSKAAPGTTAVSGKGTTPEVTSPGSPGSVGTAAATVVTGARAGATGKEKSKPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKTGRLGGEDRDTG---------------ESGGSGREKGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATDPSSCDEETTAIRDSVEKEVRAELANLNRLRAAGVASWKELGHAMGLLSLAKARKRDKVRAKGQSKGLLDAAGITVKDPKVDLKVLVWDGFFGADVKEMRMQLPELYPSTSTPYDQNEDFAARTLGEAIAVGDRAAPALIEEMRAEKKKKVDPAGKMVNAVLERDQQLRRVGTRRREAMISPSDLAASFPAPDPRMAPLRHY--PVD-NGENKD-----------TKEANHQEEG-DEGTEKLPEST-STRSKEAPPQLLPENGGDAWSGKAGDDDNKNEGPRGGTDAXXXXXXXXXXXXXXXXENLDEEQDQGDLERVPLSPLAETRGDDTSAAA-----------ITTNLPPLEPSVFHAKLEGTASREKRLKREKRLAKQAPPDDPPGDVDLARRRGGL-------------------------------ELETRFGGLICHQDTINVVSYSPDGRRLATASSDGTIKLWDPSSGKQ----VRVLTGHHEGLPVWDVAWSGDSMFLVSCAADRSLVIWNTAAAEPFVRRFLGHSDHVKRCAFADTRGQAVLSCGSDGTVRKWVLTPNVPAPPPKPFVTHKTRTWVMLNWRPAAGSNEQVTAYVVSWRLGRKGKFDDELTVAGDQLRRDVTGLLPGSLYFFRVAGVNRMGQGPWSEATDMVDTEMDLPLAMERPNVEAVTPYSIAISFFAPRPTLPKMKIQTFVLQAKGGGLDFDESDTQEFTWKEAMAGAAALRGKERMHAITQRQSIVSISRSRSVTSMATTGDR------------GSSESGRVGSIQIGSFANTTEVAGCVDGEGIAETISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGSSATFGMVPVAAEGSQDMGGDGGAGGMLAGGDGSDDRQRGSVAIVKHGSFAKGNIA--ETQPAAADGT-------QGAEGTAQARTTAGGPER---------MASGEGDESGQSGQAPFVRLSNFARRNTRIGRVDHKLRRHQRRRRKAHHYLMSLTYTGLQPGMDYHIRVAGISSVGQGAFSVPTFSARTPSVRPHACPPPTASSIFLTAIMISWAEGDDGGSSITGFFLRPVGGGQAEEISVPRIKRSYLIEGLLKGHTYRFQVRAANNEGIGPWSEPSQPVRTLTERPSPPRAPALSISHPPPGPLSLWLSLFLPDEDGGDPVTAMLLETRRHGGTQPPEWSRCERHPVPSTIDKGNQHGSSPASTSAAPTGRDGGDGGDRSSGDGKAGGILEPRRAGRGGLGDTGGIPGSTREA--RKCCEIVVLVEGLQPRTYYSFRASAVNARGASDPGPPCRRARTSAPRPPSWVLAQDIVNTTAVAAPTAPATTPSPTKSVGGIAGVAFRCLPP---------------------------RAASSGLGACTVRWEEPFSNGAAVEQYQVEVVSLGPEVEGNNVGGGGGRDEQVEDADKFSANTPEAPLKEEEGASGDAKKG--NGIGRDDQQDGPCNQPTVSAVMHKAKTDEPSETXXXXXXXXXXXXX--VVVLPAPQLP--------GREG-GTVVREVKERFPRPVPSHLRHLVIRGLATGGDYVFRVSASNAAGMGESGPWTEVVRVVDPADE 2410
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A836CAF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF5_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.730e-52 Identity = 239/935 (25.56%), Postives = 334/935 (35.72%), Query Frame = 2
Query: 3095 RRGGLGLIPGGASLVKVPTVGD-----------------WEKEVARENGGLLRELETRSGGLV---CHQDAINAVSYSPDGRRLASASSDGTVKLWDPS---AGKQACNAVRLLTGKHDGLPVWDVAWSGDSMFLISCGADRSVVIWNTAAAEPFVRRFLGHADHVKRCAFAD----------------------------TRGEA----------------------------------------------------------------------------------------VLSCGSDGTIRKWVLTPNVPAPPPKPFVTHKTRTWVMLNWRPAAGSNEQLTAYVVSWRL-GRKGKFDD--ELTVAGDQLRRDVTGLLPGSLYFFRVAGVNRMGQGPWSETSDMVDTEMDLPLAMDRPDTEAVTTESITVSFFAPRPTLPKMKIQRFVLQAKGAGQDFDEGESQEFSWDEAIAGAASLRGKERRHARAQREPIVSIARTRSVASLSATGWKVGTGGTAGHSGGGSTENGSVSVVSLGSFAGSDAIAEMGQPSTAGAVDGRAAETPAAXXXXXXXXVSDDKQSGSVGIVRLRSFAAGNIENIETKITPTEETGDTVTVGQGSDDNNSNSTAAGAVEKTGVVFPTRGIKAGKGGGRVQGGYSQLVRRGSFARRSTRVGRVEHKLRKSQRHRRKAHHYLMSLTYRGLRPGMEYHIRVAGISSVGQGAFSVQTFSARTPAVRPRACPPPTASSVCL----TTITISWAEGDDGGSSVTGFALRPT----GGGEAEE-----VSVSRTKRAHVFEDLEKGHTYSFQVRAANNEGIGPWSEPSQPVRTLTERPSAPRSPAISLARPPPGPLSLWLSIFLPDEDGGDPVTAILLETRRHGG--TQPPQWFRCER--HPVPAALRANQKGAEHGSTTATA 5422
RRGGL +PG ++LV G ++VAR NGGLL L GG CHQ A+N +++SPDG RLASA DG VKLWDP+ G A L G+H + VR GHAD + R F T A ++SCG +G +R W L+P+VP+ P +P+VT + L W P A LTA+++ R G G D E+T GD RR++ LLPG+++ FR+A VN +G+G WSE S+ V T++ +P ++RP VT ++TV+F AP PTLP+M+I F+L+A G G +WDEA+A + ++E+G + + D +E+ D SG+ + L + A G + V R +K GR L + + K HH M T L PG+ Y V+GI+S G+G S+ + +ART AV P C PPTA+ L +TI ++W DGG+++ GF +R G +A E V R L G Y+F VRA N+EG GPWSEPS+P RTLT P P P IS ++ L + LP + GDPV ++E R HGG T P Q + HP GA+ G+ +A+A
Sbjct: 1088 RRGGLAQLPGLSALVDNGANGGAYGACDAHGASAAGALITVEDVARANGGLLLTLTCTPGGAASTCCHQGAVNQIAWSPDGSRLASAGDDGLVKLWDPNWDPRGPHVGGAAGTLAGEHK--XXXXXXXXXXXXXXXXXXXXXXXXXXXSMRTLEAVRVLRGHADAIHRVLFTQGFVGRSALATAAXXXXXXPGARSPGASPTAAAARSPLSXXXXXXXXXXXXXXXXXXXXXIGAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSCGGEGEVRLWDLSPDVPSKPSRPWVTFAGADSITLVWHPPAAGAAALTAHIIGIRAAGAAGAHDTTHEVTAPGDATRREIPALLPGTVHTFRIAAVNHVGRGEWSEESEAVATDVVVPPPVERPRAAHVTANAVTVTFLAPAPTLPQMQIHAFILRAVGHGDI-----KLSITWDEALAAGQAF----------------------------------------------ASEHGLDTATA-------DPTSEL----------------------------KLDMGSGAPSVPLLAAAATGQSK----------------------------------------VKAIRALK----------------------------GRTSALLVDTAAQQAKRHHIFMCATIDSLAPGVSYRFTVSGINSKGEGPPSLPSHTARTLAVPPSQCSPPTANPAALPDGKSTIEVTWTPPADGGAAINGFIVRHCKVLQAGDQAHEQDTLEVKCGRNDVTKAIGGLLCGGLYTFCVRAVNSEGQGPWSEPSEPCRTLTTAPDQPSEPIISDTFD----TAMELMLVLP-QCNGDPVLKFVVERREHGGAWTHPLQVQLVMQPVHPAQCQQTREGGGADSGAGSASA 1861
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A7S0DRY6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DRY6_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 3.330e-15 Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 2
Query: 3221 GGLVC------HQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNAVRLLTGKHDGLPVWDVAWSGDSMFLISCGADRSVVIWNTAAAEPFVRRFLGHADHVKRCAFADTRGEAVLSCGSDGTIRKWVLT 3607
GG C H I+++ +SPDG+ LASAS DGT++LW+P GK N +++L G H + D++W+ S L S G D ++V+W+ P R +GH+ HV F+ ++S D IR W T
Sbjct: 13 GGFRCINKLKGHDKVISSLKFSPDGKYLASASGDGTIRLWNPFEGK---NLIKILDGAHTS-GINDISWNDQSRLLCSAGDDNNIVVWDIQKGVP-ARTLVGHSKHVFCVKFSRNPSNKIVSGDYDCEIRIWSST 142
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A8J2SIV4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIV4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.930e-15 Identity = 90/316 (28.48%), Postives = 130/316 (41.14%), Query Frame = 2
Query: 4763 LMSLTYRGLRPGMEYHIRVAGISSVGQGAFSVQTFSARTPAVRPRACPPPTASSVCLTTITISWAEGDDGGSSVTGFALRPTGGGEAEEVS-VSRTKRAHVFEDLEKGHTYSFQVRAANNEGIGPWSEPSQPVRTLTERPSAPRSPAISLARPPPGPLSLWLSIFLPDEDGGDPVTAILLETR--RHGGTQPPQWFRCERHPVPAALRANQKGAEHGSTTATAIRKHGGREGDTFGHRRVGGGTGASTGAGAGAVCVPSTARTATTKACCEIIVHVDDLQPRTYYSFRASAVNAQGAGDPGPPCRRVRTSAPQPPS 5701
LM+ + L+PG +Y RV+ ISSVG+G FS+ T++A+TP P P ++ T + + W + GS++ F +R +VS +R VF+ LE G YSFQ+ A N G WS S+P TLT P P P + A ++ L P + G ++ I+++ R R GG + +W R P GGTG AC I + L+P T Y FR +A+NA G D P R+RT QPP+
Sbjct: 1356 LMAAAFDELKPGFDYRCRVSAISSVGEGPFSLPTYNAKTPPDYPANPRCPVVKALSQTALKLKWVAPLENGSAIMRFLIRRKD--VTNDVSEYTRHDSEAVFDCLEPGKKYSFQICAFNQIGPSTWSPWSEPTSTLTALPKVPERPTVLEATI----TAVTLRCVKP-HNSGKIISTIVVQRRELRPGGVKS-EWASKTRFPPNP------------------------------------GGTGV---------------------AC---IFTISPLEPYTVYQFRCAAINAHGQSDWSLPSFRIRTCKAQPPA 1603
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A1I7CHX0_9MICC (WD domain-containing protein, G-beta repeat-containing protein n=1 Tax=Arthrobacter sp. ov118 TaxID=1761747 RepID=A0A1I7CHX0_9MICC) HSP 1 Score: 72.0 bits (175), Expect = 9.930e-10 Identity = 37/83 (44.58%), Postives = 59/83 (71.08%), Query Frame = 2
Query: 3236 HQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNAVRLLTGKHDGLPVWDVAWSGDSMFLISCGADRSVVIWNTAAAE 3484
H DA+N++++ PDG +ASAS+DGTV++W+P++G+ +V LTG H G PV+ VA+S D L S G+D +V++W+ A +
Sbjct: 40 HLDAVNSIAFGPDGS-IASASADGTVRIWNPASGR----SVGPLTG-HQG-PVYGVAFSPDGRVLASGGSDNNVLLWDAATGK 115
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A1D3CRJ6_9EIME (Putative sec 13 n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A1D3CRJ6_9EIME) HSP 1 Score: 71.2 bits (173), Expect = 2.150e-9 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 2
Query: 3194 LLRELETRSGGLVCHQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNAVRLLTGKHDGLPVWDVAWSGDSM--FLISCGADRSVVIWNT-AAAEPFVRRFLG--HADHVKRCAFADTRGEAVLSCGS-DGTI 3589
+L + ET GG ++AVS+ G ++A+ASSD +++LWD SA ++ L G H G PVW V W+ L SCG DR +V+W + A+ FV + H V AFA +L+ GS DG I
Sbjct: 4 ILSQFETFHGG------PLHAVSFDLYGTKVATASSDESIRLWDVSAANAGAQFLQELRG-HSG-PVWQVCWAHPRFGSVLGSCGYDRRIVVWQQQSGAQAFVPVYSNDEHGASVNALAFAPEAAGLILAAGSSDGCI 133
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: UPI0012FBE4DF (hypothetical protein n=1 Tax=Zavarzinella formosa TaxID=360055 RepID=UPI0012FBE4DF) HSP 1 Score: 73.9 bits (180), Expect = 3.250e-9 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 2
Query: 3242 DAINAVSYSPDGRRLASASSDGTVKLWDPSAG-KQACNAVRLLTGKHDGLP----VWDVAWSGDSMFLISCGADRSVVIWNTAAAEPFVRRFLGHADHVKRCAFADTRGEAVLSCGSDGTIRKWVLTPNVPAPPPK 3634
+ + A+++SPDGRRLA+A+ DG V+L DP+ G +QA + + + G + +S D +L+ G D SV +WN A + +R F GH V +F R A LS G DG +W + P P P+
Sbjct: 532 NTVTALTFSPDGRRLAAATGDGRVRLCDPTTGVEQAVFQIIAVPAMNRGFRYPHGAGSLGFSADGKWLLIGGPDGSVRLWNVDARQEALR-FTGHLRRVTLVSFGTGRRTA-LSVGDDGIAYQWEMRPAAGPPGPR 665
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A6P6RXB1_9EIME (protein transport protein SEC13 n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6RXB1_9EIME) HSP 1 Score: 71.2 bits (173), Expect = 9.480e-9 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 2
Query: 3194 LLRELETRSGGLVCHQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNAVRLLTGKHDGLPVWDVAWSGDSM--FLISCGADRSVVIWNT-AAAEPFVRRFLG--HADHVKRCAFADTRGEAVLSCGS-DGTI 3589
+L + ET GG ++AVS+ G ++A+ASSD +++LWD SA ++ L G H G PVW V W+ L SCG DR +V+W + A+ FV + H V AFA +L+ GS DG I
Sbjct: 4 ILSQFETFHGG------PLHAVSFDLYGTKVATASSDESIRLWDVSAANAGAQFLQELRG-HSG-PVWQVCWAHPRFGSVLGSCGYDRRIVVWQQQSGAQAFVPVYSNDEHGASVNALAFAPEAAGLILAAGSSDGCI 133
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: I0Z5Q4_COCSC (WD40 repeat-like protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z5Q4_COCSC) HSP 1 Score: 70.1 bits (170), Expect = 9.540e-9 Identity = 51/157 (32.48%), Postives = 78/157 (49.68%), Query Frame = 2
Query: 3236 HQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNAVRLLTGKHDGLPVWDVAWSGDSM--FLISCGADRSVVIWNTAAAEPFVRRFLG--HADHVKRCAFADTR-GEAVLSCGSDGTIRKWVLTPNVPAPPPKPFVTHKTRTWVMLNWRPAA 3691
H D ++ V + GRRLA+ SSD T+K+++ +AG Q +L+ H+G PVW V W+ L SCG D V++W A +V+ + H+ V AFA G + + SDG+I +LT + A P + ++W PAA
Sbjct: 15 HSDTVHDVQFDYYGRRLATCSSDRTIKVFE-TAGDQMAEVSQLVG--HEG-PVWQVTWAHPKFGSLLASCGFDHKVIVWKEAQESQWVQAYSAPVHSASVNSVAFAPHELGLILAAASSDGSIS--ILTYHEGAWTPYKVADAHSLGATAVSWSPAA 165
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Match: A0A7S1XYL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYL7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.290e-8 Identity = 49/138 (35.51%), Postives = 71/138 (51.45%), Query Frame = 2
Query: 3236 HQDAINAVSYSPDGRRLASASSDGTVKLWDPSAGKQACNA---------VRLLTGKHDGLPVWDVAWSGDSMFLISCGADRSVVIWN-----TAAAEPFVRRFLGHADHVKRCAFA---DTRGEAVLSCGSDGTIRKW 3598
H++A+ A+ +SPDGR LASAS D TV++WD +A C+A +R+L H+G V+ V ++ D L SC AD V++W+ AA+ VR A V AF+ RG + S G +R W
Sbjct: 49 HEEAVFALDFSPDGRTLASASYDRTVRIWDLAALDSVCDADGGADAAAQLRVLDA-HEGA-VYAVRYAPDGAVLASCAADGKVMVWDMRARGAVAAKRPVRALGAAAAGVSDAAFSLSFSPRGTILASGHKSGVVRIW 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig182.87.1 >prot_P-littoralis_Contig182.87.1 ID=prot_P-littoralis_Contig182.87.1|Name=mRNA_P-littoralis_Contig182.87.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1737bp MRRARRFPTTVASKRVLGRQTVWVTLRERPPRVPPATLFAANRLKPRKRNback to top mRNA from alignment at P-littoralis_Contig182:320332..343314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig182.87.1 ID=mRNA_P-littoralis_Contig182.87.1|Name=mRNA_P-littoralis_Contig182.87.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=22983bp|location=Sequence derived from alignment at P-littoralis_Contig182:320332..343314+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig182:320332..343314+ >mRNA_P-littoralis_Contig182.87.1 ID=mRNA_P-littoralis_Contig182.87.1|Name=mRNA_P-littoralis_Contig182.87.1|organism=Pylaiella littoralis U1_48|type=CDS|length=5211bp|location=Sequence derived from alignment at P-littoralis_Contig182:320332..343314+ (Pylaiella littoralis U1_48)back to top |