prot_P-littoralis_Contig182.83.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig182.83.1
Unique Nameprot_P-littoralis_Contig182.83.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length273
Homology
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 3.130e-98
Identity = 161/245 (65.71%), Postives = 176/245 (71.84%), Query Frame = 0
Query:   30 IPGRPACRRWLSDAT--TGAPPSSTYSASDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGRGRAEIPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGSALSSKRARGEEGHVEDPVDWEEDFGQKAAEAAGRGVAEVDR 272
            +PG  ACRRWLSD++  T  PPSS  +A+D                                              RPGRG AEI +I RVNLTV+EVVKAVEAQG TDVRAIDLRGK AGMGDFMVF TA  PL MRR+ANMVVQALK R LVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASG+AL SKR +GEEGHVEDPVDWEEDFGQ+AA+AAGRG+ + +R
Sbjct:   35 VPGL-ACRRWLSDSSSDTPRPPSSAAAATDGRTWTWSTPSPN----------------------------------RPGRGGAEIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGHVEDPVDWEEDFGQEAAKAAGRGIIDENR 244          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.300e-30
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0
Query:  104 RPGRGRAEIPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 227
            R   G A+I +  +V LTV EVV A+E  G TD+R + L GK + + D M+F T  +  HM+R+++++  ALK R L +A GITGAEG DCDDWM+VDC NLIVH   A+ R+EL+LE  WE +
Sbjct:   88 RKAGGSADIDVKPKVPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENI 210          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.220e-26
Identity = 52/118 (44.07%), Postives = 82/118 (69.49%), Query Frame = 0
Query:  112 IPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS 229
            IP + +  LT++EV +A+E + A DV  +DL GK + + D+MVF+T  +  HMRRMA+++++++K R +V+     G EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE + +
Sbjct:   69 IPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 184          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 114 bits (284), Expect = 3.420e-26
Identity = 55/116 (47.41%), Postives = 82/116 (70.69%), Query Frame = 0
Query:  112 IPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 227
            IP I +  L+++EV KA+E + A DV  +DL GK +G+ ++MVF T  +  HMRRMA++++++LK R +V+     G EG DCDDWM+ DC+N++VHFM A+ R+ L LE HWE +
Sbjct:  150 IPPIPQTYLSLDEVQKALEREKAIDVYTVDLSGK-SGLANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWENM 263          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 112 bits (281), Expect = 5.840e-26
Identity = 56/121 (46.28%), Postives = 84/121 (69.42%), Query Frame = 0
Query:  106 GRGRAEI-PIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 225
            G+  A+I P I +  LT++EV+ A+E + A DV  +DL GK + + DFMVF+T  +  HMRRMA+M++Q++K R + +    +  EG DCDDWM+ DC+N++VHFM  + R+ L+LE HWE
Sbjct:  110 GKRNADIIPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWE 228          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A3R7GIQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GIQ2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.220e-25
Identity = 52/118 (44.07%), Postives = 82/118 (69.49%), Query Frame = 0
Query:  112 IPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS 229
            IP + +  LT++EV +A+E + A DV  +DL GK + + D+MVF+T  +  HMRRMA+++++++K R +V+     G EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE + +
Sbjct:  185 IPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 300          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.250e-25
Identity = 70/159 (44.03%), Postives = 90/159 (56.60%), Query Frame = 0
Query:  111 EIPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE----TVASGSALSSKRARGEEGHVEDP------VDWEEDFGQKA 259
            +IP++ R  LTVEEV  A+E      V  +D+ GK       MVF T     HMRRMA+++V ALK R  + A G +GAEG DCDDWM+VD  N+IVH M  +AR+ LDLE HW+    T+  G   S + A  EE   + P      VD EE F  +A
Sbjct:   87 QIPVVPRKYLTVEEVTTALEELRGMQVAVVDVTGKLEETSS-MVFCTGLGRTHMRRMADVLVSALKKRK-IKAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKNPEATLPQGGTESQREAHIEELIEQFPTPYDYNVDEEESFVDEA 243          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: H3GI95_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI95_PHYRM)

HSP 1 Score: 112 bits (280), Expect = 1.270e-25
Identity = 53/116 (45.69%), Postives = 82/116 (70.69%), Query Frame = 0
Query:  112 IPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 227
            IP I +  LT++EV++A+E + A DV  +DL GK + + DFMVF+T  +  HMRRMA+++++++K R +V+    +  EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE +
Sbjct:  148 IPSIPQTYLTIDEVMEALEKEKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKVRQIVDDFDYS-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEEHWEKM 261          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A3M6VLF3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLF3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.500e-25
Identity = 51/114 (44.74%), Postives = 83/114 (72.81%), Query Frame = 0
Query:  112 IPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 225
            IP I++  LT++EV++A++ + A DV+ +DL GK + + +FM+F+T  +  HMRRMA+++++++K R +V+     G EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE
Sbjct:  158 IPPIAQTYLTIDEVMEALKREKAIDVQCVDLAGKSS-LAEFMIFATGRSQAHMRRMADLLIKSIKVRNIVDDFDY-GVEGRDCDDWMIADCNNIVVHLMRADTRRILALEDHWE 269          
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Match: A0A329SL63_9STRA (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A329SL63_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.940e-25
Identity = 53/116 (45.69%), Postives = 80/116 (68.97%), Query Frame = 0
Query:  112 IPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMGDFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 227
            IP I +  LT++EV +A+E + A DV  +DL GK + + DFMVF+T  +  HMRRMA+++++++K R +V+       EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE +
Sbjct:  154 IPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYA-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEDHWENM 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI3.130e-9865.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA2.300e-3050.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3F2RH48_9STRA1.220e-2644.07Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0P1A703_PLAHL3.420e-2647.41Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]
A0A2D4BP62_PYTIN5.840e-2646.28Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
A0A3R7GIQ2_9STRA1.220e-2544.07Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A7S2R5J7_9STRA1.250e-2544.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3GI95_PHYRM1.270e-2545.69Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3M6VLF3_9STRA1.500e-2544.74Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A329SL63_9STRA1.940e-2545.69Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 118..233
e-value: 1.6E-25
score: 91.0
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 122..225
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 122..224
e-value: 2.7E-17
score: 60.7
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 117..239
NoneNo IPR availablePFAMPF02410RsfScoord: 123..224
e-value: 6.4E-22
score: 77.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..110
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 117..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:297413..300632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.83.1mRNA_P-littoralis_Contig182.83.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig182 297255..301414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig182.83.1 ID=prot_P-littoralis_Contig182.83.1|Name=mRNA_P-littoralis_Contig182.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=273bp
MSLRHLANAAHRAAGRKMLMAACSISSAVIPGRPACRRWLSDATTGAPPS
STYSASDSATAAAVATDTNAAGAGAGAGAPDTASGASGDADGRAWTWSTP
SPNRPGRGRAEIPIISRVNLTVEEVVKAVEAQGATDVRAIDLRGKDAGMG
DFMVFSTATNPLHMRRMANMVVQALKHRTLVNAMGITGAEGIDCDDWMLV
DCDNLIVHFMTAEARQELDLETHWETVASGSALSSKRARGEEGHVEDPVD
WEEDFGQKAAEAAGRGVAEVDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043519NT_sf
IPR004394Iojap/RsfS/C7orf30