mRNA_P-littoralis_Contig182.73.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 1133 bits (2930), Expect = 0.000e+0 Identity = 614/752 (81.65%), Postives = 650/752 (86.44%), Query Frame = 1
Query: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAV---QPRAAVARNMRIMSAAVDETEATEVVSSDTDEATAVEIPAATDDVMEVRTXXXXXXXXXXIPLEDIVAGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNIEGVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGN----DRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMREPRQASRGGGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGXXXXXXXXXXXXXXXXXXXXXXGMDSAAFGREDFAGPSQGGXXXXXXXADWQQFLNNYFDDKE 2235
MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRA +P AA R MRIMSAAVDETE TE + T E P + I LEDIV GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVD EARKLVLSMR+KPR+SS QG++ KYADMLAEDP+QF+SAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHV+DVSDVL+VGQVVDVRIREVDEKLGRINMSLLPYGQGE R PV+A KDVSHLAG D TEFRKGTVSAVADYGLFVNIEGVDGLLH+SK+S DRS++SENIH+ Y EGQEV++RI+EVNT+NNKMSLSMLP T+EADF +YT V +EW+EGTVVSIMNYGAFVRL+GDVDGMVHISQLD HGERVDSVYN+VEIGQ V+VRILEADP ++KLRLTMRE GYEGATGG MG DRRG KK KSV+QFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNV+DHLQ+GQEVQVRVIEVDVDNCRLGLSMREPRQ S G +RGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMA+GRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGG XXXX MDSAAFGREDFA +Q XXXXXXXADWQQFLNNYFDDKE
Sbjct: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVDETETTEAAAEATLEEXXXXXPVXXXXXXPISPAMEDDDDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRG-ARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGDEGFGAEGGRRGRGGGXXXXXMDSAAFGREDFADTTQ--XXXXXXXADWQQFLNNYFDDKE 749
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 516 bits (1329), Expect = 1.100e-166 Identity = 325/768 (42.32%), Postives = 435/768 (56.64%), Query Frame = 1
Query: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRA---VQPRAAVARNMRIMSAAVDETEATEVVSSDTDEATAVEIPAATDDVMEVRTXXXXXXXXXXIPLEDIVAGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQ-GDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNIEGVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGE-RVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGAT--GGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMREPRQASRGGGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGN--IDGLVHISEMAVGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGXXXXXXXXXXXXXXXXXXXXXXGMDSAA------FG--------REDFAGPSQGGXXXXXXXADWQQFLNNYFDDKE 2235
MR V V L AV+LGL S AF + VV H+ N A+S TR+ V+ ++ SAA +T L D+V G++YEGV++NV++YGAFVDIG E NGLVHISQLAD FV+N + V EGD V V+VL++D +KLVL+MR PRA+ Q DL+ YA++LA DP + + VE++V YGAF L +GCSGF+HISQ+ P E VS+VSDV++VGQ V VR+R+VD+ L R+N+SLLP T +A KDVS LA D FR GTVSAV DYG FV ++GVDGLLHISKI +++ + S GQEV VRIL V+ + NK+SL+M+ E D + +EW+EG+VVS YGAFV L +DGMVHIS+L GE RVD+V + + +G AVKVR++E P +K+RL+MRE G A G GG RG + K V + + EEW+ G+V S T FGAFVA+ DGLLH+S++A V D L GQE++VRVI+VD + R+GLS+R+ R+A +D+SVL G D F+PG V S+V YG FV ++ I+GL+H+S+++ RV+ V DV G +VQVR+ +++ D VNLSM+P G+ DRS G D AA FG R F ADWQ++LN YF+ K+
Sbjct: 1 MRCVSVPLQTAVLLGLVSGSAAFAFAPN-AKVVVHQHRLNRAISNTRSRLSVRMSTVAPADLADNSAAASKT-----------------------------------------LLADLVVGQQYEGVVSNVLSYGAFVDIGAEANGLVHISQLADAFVSNPTEIVAEGDSVSVKVLSIDQAEKKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGA-----TSAAATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARRAPV------SRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRS------------------RNARRGTGEDGAADDASDPFGTGERRKSPRPRFNDYEDSALNVGGGEADWQKYLNQYFEKKD 694
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 437 bits (1124), Expect = 8.020e-136 Identity = 292/780 (37.44%), Postives = 417/780 (53.46%), Query Frame = 1
Query: 1 MRTVRVNLPLAVMLGLAGSSTAF--LQSVRPTNFVVPAHKYNAAVSRTRAVQPRAAVARNMRIMSAAVDETEATEVVSSDTDEATAVEIPAATDDVMEVRTXXXXXXXXXXIPLEDIVAGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPR--ASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDG------------CSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNIEGVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMREPRQAS----------RGGGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIE--GNIDGLVHISEMAVGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGXXXXXXXXXXXXXXXXXXXXXXGMDSAA-------FGREDFAGPSQGGXXXXXXXADWQQFLNNYFDDKE 2235
MR RV+LP AV+LGL S F L S R + VPA +++AAVS +R +RN R + + TEA V +P A + + + L D+ G Y+G++NNVV YG FVDIG VNGLVH SQL++ FV N + V +GD V VRV+ +DV+AR+L LSMR R A + S D+ YA LA DP +FI V+ ++ GAF L G GF+H SQ+ P E V D D LS GQ V VRIREVD +L RI++SLLP +G + SA +DVS + G D EFR GTV ++ +YG+FV ++GVDGLLH S+I R +S + A ++ GQ+V VR+ V+T+ N++SLSM+P D +++ + D W++G V + +GAFV + VDG+VHISQL + +V + V +G AV+VR++E DP + R + VK V +++ PE W+ G VA++ FGAFV +D DGL+H SQI +D L GQ V+VRV+ D + RL LSM +P +A+ + GS +DVSVL G DPD F+ G V S++P+G FV ++ G + GL+H+SE++ GRV+ V +V G ++VR+ +++T ++LSM+ G+ DR+ G G SA F + + XXXXXX DW+++LN YF K+
Sbjct: 1 MRCPRVSLPSAVLLGLVLRSHGFVVLSSTRQ-HIHVPARQHSAAVSCSRC-------SRNRRAVLMYISSTEA-------------VSLPVAEERPEKTK-------------LSDLQLGVMYQGIVNNVVDYGVFVDIGASVNGLVHKSQLSNTFVTNPEKIVSQGDSVTVRVIGIDVDARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPERRXXXXXXXXXXXXXXXXXXXXXXXXXR--RGVKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGSDGGSSRTGDGGADETDLFGGGSSARKKSPRPRFNDDGASXXXXXXXXXXXXEQDWRKYLNEYFAKKD 742
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A2N1PT36_9BACT (Uncharacterized protein n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PT36_9BACT) HSP 1 Score: 219 bits (558), Expect = 1.250e-55 Identity = 149/464 (32.11%), Postives = 250/464 (53.88%), Query Frame = 1
Query: 352 GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLA-DEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAG--VDSTEFRKGTVSAVADYGLFVNIE-GVDGLLHISKIS-NDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMRE 1728
G E EGV+ N+V YGAFV+I + GLVH S ++ V N D VK G+ VRVRVL +D++ +K+ L M++ + D K + + + K+ N+VSYGAF LE G G VH+S MS T + V +++ G+ VDVRI E+D +I+ + A D + G D E G V+ + ++G+FV +E G++GL+H+S IS + V+ + A G EV V++L++ + K+SL + V+ + + T+ + E GTV ++ N+GAFV L+ V+G+VHIS + + E++D ++ ++V++LE + KK+ L ++++ D + + K + + + G V IT FGAFV ++D +GL+HISQ+++ HV V+D + +G ++V++IE+ D +L LS+R+
Sbjct: 340 GTEVEGVVRNIVNYGAFVEIEPGLEGLVHHSDMSWTRRVNNPKDFVKSGEEVRVRVLEIDLDQKKISLGMKQ----LTPDPWDDIKIRYKVDD----VVKGKITNVVSYGAFVELEPGLEGLVHVSDMSWT-KRVKHPDEIVRAGEDVDVRILEIDVDKRKISFGIK-------------QATADPWSIIGKSYDIGEIYTGKVTNITNFGIFVELEEGIEGLVHVSDISWTQKIVNPAGVCAI---GDEVKVKVLDIKPGDKKISLGIKQVSADPWSSVETEFKVGETYTGTVKNLTNFGAFVELKDGVEGLVHISDM-SWTEKIDHPSQILKSSDKIRVKVLEINTSDKKISLGLKQLVL------------DPWAVFEEKYHEGMI-------VDGEVLRITSFGAFVRIEDGIEGLVHISQLSDKHVEKVEDVVAIGDRIRVKIIEIKDDERKLRLSLRD 758
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A1V5US35_9BACT (30S ribosomal protein S1 n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5US35_9BACT) HSP 1 Score: 207 bits (527), Expect = 4.210e-52 Identity = 145/546 (26.56%), Postives = 276/546 (50.55%), Query Frame = 1
Query: 352 GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKE-GDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNIE-GVDGLLHISKISNDRSVS--SENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMREPRQASRGGGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEMGQEVQVRISDI 1974
G G + + YGAF+DIG ++GL+HI+ ++ V+N D V G + +VL +D + +K+ L +++ + GD K ++ V+NI YG F LE G G +H+S +S +G + +D S GQ + ++ +V+ ++ +I + + + + T +++ G + ++ +YG+FV +E G++G +HIS IS + ++ SE + G ++V++L+++ K++L + + ++ +++ VEG V ++ +GAFV LE ++G++HIS L + +R++ ++ G VKV+I+E +P KK+ L+ + + K D + G++ FGAFV V++ +GLLH S +A S+ + L+ G+ ++V V+ +D DN ++ L +++ Q ++ D E + G+V SI YGAF+ + I+GL+HIS++A RVD VE+V + GQ+V+V++ ++
Sbjct: 213 GSTVAGTVKSFTEYGAFIDIGG-IDGLLHITDMSYGHVSNPADVVSSIGSQITCKVLKLDRKTKKISLGLKQLSKNPWEEVGDKYKVGEIY--------ECTVKNIADYGVFATLEPGVDGLIHVSDLSWSGR--TRPNDFKS-GQKIKAKVIDVNLEIKKIKLGIKQVTKDPWEKVTETYPENTITN-----------GKIKSILNYGVFVELEDGIEGFIHISNISWTKKINHPSELLKV----GDSIEVKVLKLDLETKKINLGIKQTHVDPWTMVESKFKVEQIVEGKVTNVKKFGAFVELEEGIEGLIHISDL-SWTKRLNHANEMLKTGDPVKVKIIEINPAEKKIALSYKH-------------------LTKDPWSDIETRFPIGATVEGKITHFASFGAFVEVEEGVEGLLHTSDLAWNKKYSDPSEVLKEGETIKVLVLNIDKDNRKMSLGVKQLAQDPL---------IAYKEKMDSGEMLDGKVKSIQEYGAFIEFDDGIEGLIHISQLADERVDKVENVVKAGQQVKVKVIEV 702
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A2V9LYV5_9BACT (30S ribosomal protein S1 (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LYV5_9BACT) HSP 1 Score: 203 bits (517), Expect = 3.870e-51 Identity = 157/564 (27.84%), Postives = 285/564 (50.53%), Query Frame = 1
Query: 334 LEDIVAGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQG--EVM--RGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNIE-GVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMREPRQASRGGGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSM 2007
+E + G+ EGV+ N+ YGAF+D+G V+GL+HI+ ++ V + + GD ++V+V+ + E ++ L ++ D +ADM + + KV ++ YGAF LE G G +HIS+M+ + V S ++SV ++VDV I ++D + RI++ L +VM R TP + I G V V D+G+FV +E G+DGL+HI+ +S R + ++ G ++ V++++ N + ++SL ++++ + + V+G VVS+ +YGAFV LE ++G++HIS++ +RV V + + V V IL+ D +++ L +++ + ++S +P I+G+V ++T FG FV V++ DGL+H+S ++ V + + + G EVQ ++ +D N +L L +++ + R + +V + + G VV I +GAFV + I+GL H+SE+ VD + GQEV+++I +N + LS+
Sbjct: 160 MEVLEDGKVMEGVVKNITDYGAFIDLGG-VDGLLHITDMSWGRVNHPSELFNVGDKIKVKVIKFNREDGRVSLGYKQLSE-------DPWLHADMRYPKNLR-VQGKVVSLTDYGAFVELEPGIEGLIHISEMT-WNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGLKQTEPNPWDVMESRYTPGTVIT---------------GKVRNVTDFGVFVEVEDGIDGLVHITDMSWGRVNHPSEL---FNVGDKIKVKVIKFNREDGRVSLGYKQLSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEM-TWNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGLKQT--------------EPNPWDVMES-----RYTPGTVITGKVRNVTDFGVFVEVEEGIDGLVHVSDMSWTKRVKHPSELFKKGDEVQAVILSIDAANQKLSLGIKQ-LEPDRWEDWFSRHNVG--------DVVRGNVVRITNFGAFVELADGIEGLCHVSELDEKHVDKPAEFLAAGQEVEMKIIKLNLQEKKIGLSL 666
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A813M171_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813M171_POLGL) HSP 1 Score: 199 bits (507), Expect = 3.040e-49 Identity = 192/653 (29.40%), Postives = 285/653 (43.64%), Query Frame = 1
Query: 331 PLEDIVAGEEYEGVINNVVTYGAFVDI---GTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDG---CSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGT-------------------------PVSAIKDVSHLAGV--------------------------------DSTEFRKGTVSAVADYGLFV-NIEGVDGLLHISKISNDRSVSSENIHATYSEGQEV------DVRILEVNTSNNKMSLSMLPVTDEADF-----------TKYTQVGLDEW-----VEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDD---TDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMREPRQASRGGGS--RGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNI---EGNIDGLVHISEMAVGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSM 2007
P D+ + + GV+ + +GAFV + G +GLVH+SQ+ D FV N D + EG V+VRV +VD++A K+ LSM +++ KV I S+GAF + G G VHI+Q+ +V V D LS GQ V VR++ VD G+ MSL + VMRG P+ + S AG D G VS V G FV + DG ++ D ++ I+ Y G+ V D + + S + D+ D KY + D+ G + S++++GAFV + + DG++HIS++ ERV+++++AVE GQ ++ I K +TM E EGA RRG + F +LSP++W G VA I FGAFV V + DGL+H+SQI + V NV D + GQEVQVRV VD+D ++ LSM+ R D+ D ++ G+V I +GAFV + + DGLVHI+++ G V+SV+D GQEVQVR+ ++ ++L+M
Sbjct: 229 PFRDLSPDDWHPGVVARIAPFGAFVTVTVNGASADGLVHVSQIKDGFVDNVADEISEGQEVQVRVQSVDMDAGKMSLSMNT-------------------------WLTGKVARIASFGAFVTVTSGDATADGLVHITQIKDG--YVESVQDELSEGQEVQVRVQSVDMGAGK--MSLTMKSEEVVMRGRTGGQPGQQLPWPSLAAQRTLPQNPCPLPQVLSASRSAGQSYGGSRVPLASRGGEQTAGSFAVDDVVKAICPDDDVRYPGIVSKVNKDGSFVVTWDDPDGGPETHEVQAD-AMQKVVIYKDYKVGEAVQAVCPDDDNMYDGVVSKINKDGTFQVKWDDPDGGSEDNPVAPKDMKYPPIPFDKLEVGQKYAGKIRSVLDFGAFVDIGAEGDGLLHISRISK--ERVENIHDAVEEGQEIECWI-SGKRDDGKFGVTMVEGLTEGA----------RRGPADLTP---FRDLSPDDWHPGVVARIAPFGAFVTVTVNGASADGLVHVSQIKDGFVDNVADEISEGQEVQVRVQSVDMDTGKMSLSMKSXXXXXXXXXXXMRAPSDLGPFQDVDSSTWLTGKVARIASFGAFVTVTSGDATADGLVHITQIKDGYVESVQDELSEGQEVQVRVQSVDMGAGKMSLTM 835
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A367ZTI6_9BACT (Cytidylate kinase n=1 Tax=Candidatus Ozemobacter sibiricus TaxID=2268124 RepID=A0A367ZTI6_9BACT) HSP 1 Score: 199 bits (507), Expect = 5.100e-49 Identity = 141/462 (30.52%), Postives = 246/462 (53.25%), Query Frame = 1
Query: 352 GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNI-EGVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDE--ADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMRE 1728
G+ +GV++ +V YGAFVD+G V GL+H + L+ + N + V+ G + ++L +D E K+ L +++K D D E ++ KV+N++ +GAF LE+G G VHIS +S +V SD++ G + V ++E+D+ RI++S Y + + + V L KG V+ + D+G FV I EG++GLLHIS + + V+ +GQEV+V+IL +++ N ++SL + T++ D K +VG + V G V ++++YGAFV+LE ++G++HIS+ + D + +++G V V I E D +K+ L++R VG + +G++K V+ G+V I + GA V + ++ G +H+SQIA++ V + + ++ G V V+V+E+D N +L LS++E
Sbjct: 446 GDLIKGVVSRLVEYGAFVDLGDGVEGLIHRNDLSWSVITNPREVVQPGQEIEAKILKIDHEKGKISLGLKQKKE-------DPWVTVDQRYEVGRKY-QGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPSDIVKSGDTITVLVKEIDKAKKRISLS---YKETQPHPWENIEQRFKVGDLV--------KGRVNNLTDFGAFVEIAEGIEGLLHISDMDWVKKVNHPK--EILEKGQEVEVKILNIDSHNRRLSLGLKQTTNDPWTDLDKLFKVG--DIVTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-DVLKVGDQVTVAIYELDKYKQKIGLSLRRVGED-----------PWKGIEKRFPVNSLQQ--------GKVIHIENSGAEVELAENVRGFIHVSQIAQERVQHPSEAVKEGDIVTVKVLEIDRKNRKLKLSIKE 863
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A847LEK2_9BACT (Cytidylate kinase n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847LEK2_9BACT) HSP 1 Score: 199 bits (506), Expect = 6.840e-49 Identity = 139/462 (30.09%), Postives = 247/462 (53.46%), Query Frame = 1
Query: 352 GEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMSLLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNI-EGVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDE--ADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMRE 1728
G+ +GV++ +V YGAF+D+G V GL+H + L+ +AN + V+ G + ++L +D E K+ L +++K D D E ++ KV+N++ +GAF LE+G G VHIS +S +V D++ G+V+ V ++E+D+ RI++S + T ++ H + + KG V+ + D+G FV I EG++GLLHIS + + ++ +GQEV+V+IL +++ N ++SL + T + D K ++G + + G V ++++YGAFV+LE ++G++HIS+ + D +++G V V + E D +K+ L++R V + G +RR V SV Q G++ S+ + GA V + ++ G +HISQIA+ V + + ++ G V V+V+E+D N +L LS++E
Sbjct: 447 GDTIKGVVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVIANPREVVQPGQEIEAKILKIDNEKGKIALGLKQKKE-------DPWGTVDQRYEVNRKY-QGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPQDIVKSGEVITVLVKEIDKTKKRISLSY---------KDTLPHPWDNIEHKYKIG--DLVKGKVNNLTDFGAFVEISEGIEGLLHISDMDWVKKINHPK--EVLEKGQEVEVKILNIDSHNRRLSLGLKQTTSDPWGDLEKMFKIG--DVLTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-EVLKVGDQVTVAVYELDKHKQKIGLSLRRVSDDPWKG------IERR--FPVNSVQQ-----------GKIVSVENSGAEVELAENVRGFIHISQIAQVRVQHPSEAVKEGDVVNVKVLELDRKNRKLKLSIKE 864
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Match: A0A847HL75_9BACT (S1 RNA-binding domain-containing protein n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847HL75_9BACT) HSP 1 Score: 189 bits (481), Expect = 1.230e-47 Identity = 131/459 (28.54%), Postives = 242/459 (52.72%), Query Frame = 1
Query: 364 EGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDVEARKLVLSMREKPRASSTSQGDLTKYADMLAEDPTQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLSVGQVVDVRIREVDEKLGRINMS---LLPYGQGEVMRGTPVSAIKDVSHLAGVDSTEFRKGTVSAVADYGLFVNIE-GVDGLLHISKISNDRSVSSENIHATYSEGQEVDVRILEVNTSNNKMSLSMLPVTDEADFTKYTQVGLDEWVEGTVVSIMNYGAFVRLEGDVDGMVHISQLDAHGERVDSVYNAVEIGQAVKVRILEADPITKKLRLTMREVGYEGATGGVMGGGNDRRGMKKVKSVDQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVDDHLQVGQEVQVRVIEVDVDNCRLGLSMRE 1728
+G ++ +V YGAFVD+G V GL+H + L+ ++N + V+ G+ V R+L +DVE K+ L +++K + + + D + ++ +V+N++ +GAF LE+G G VHIS +S ++ S+V++ G +D+ ++E+D++ RI++S +LP+ EV T I DV G V+ + D+G F+ I+ G++GLLH+S + + ++ +GQEV V+IL ++++N+++SL + T + T + + V G V +I+NYGAFV+LE ++G++H+S+ E V++ A+++G V V + E D +K+ L++R ++ D + G++ ++ G V V + G +HISQ+A V+ + ++ G V +V+E+D N RL LS++E
Sbjct: 89 KGTVSRIVEYGAFVDLGDGVEGLIHRNDLSWSVISNPREVVQPGETVEARILKMDVEKGKISLGLKQK-------KDNPWETVDGRYQVGKKY-HGRVKNLMDFGAFVELEEGIEGLVHISDLS-WARNIKHPSEVVASGAEIDIVVKEIDKEKKRISLSYKEVLPHPWDEV---TSKYKIGDVV-----------TGKVNNMTDFGAFIEIQQGIEGLLHVSDMDWVKKINHPK--EVLEKGQEVKVKILNIDSANHRLSLGLKQTTTDPWETVENTYKVGDQVTGVVKNIVNYGAFVQLESGLEGLLHVSEFSWQNE-VENPAEALKVGDQVTVMVYEIDRNKQKIGLSLRR-------------------LQDDPWRDVERKFGKDSVHQGKITNLLENGVEVEVTEGITGFVHISQLAAQRVNTPSEVVKAGDVVTYKVLELDRKNRRLKLSIKE 502 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.73.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig182.73.4 >prot_P-littoralis_Contig182.73.4 ID=prot_P-littoralis_Contig182.73.4|Name=mRNA_P-littoralis_Contig182.73.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=746bp MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAVQback to top mRNA from alignment at P-littoralis_Contig182:247553..257212+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig182.73.4 ID=mRNA_P-littoralis_Contig182.73.4|Name=mRNA_P-littoralis_Contig182.73.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9660bp|location=Sequence derived from alignment at P-littoralis_Contig182:247553..257212+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig182:247553..257212+ >mRNA_P-littoralis_Contig182.73.4 ID=mRNA_P-littoralis_Contig182.73.4|Name=mRNA_P-littoralis_Contig182.73.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2238bp|location=Sequence derived from alignment at P-littoralis_Contig182:247553..257212+ (Pylaiella littoralis U1_48)back to top |