prot_P-littoralis_Contig182.70.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig182.70.1
Unique Nameprot_P-littoralis_Contig182.70.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1150
Homology
BLAST of mRNA_P-littoralis_Contig182.70.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 489 bits (1260), Expect = 2.300e-150
Identity = 433/778 (55.66%), Postives = 477/778 (61.31%), Query Frame = 0
Query:  101 SVAGPSDAPVDGTRKSAMGAVRMFDFSFSELGPGSHLPADIVTPHPSALLDEQQDSDLQKXXXXXXXXXXXXXSALSLRECSLGNEGLAEMVRSPWVIGAAAARAISLRHNQVAAAGVRALLESLRSSDVSGDRLSCLELDFNPIGDAGVQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAARTSVGGXXXXXXVGGAFAKDQAEIEVESGEAEGTGGIVVPV----------------SDAVLSRPVASGIRRLLLTGNDRLGDAGARALASALKKDRSLELLDLTRCNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYAGSSSVLESLELQGNRIGDAGALALANGFAG---RGGITSAXXXXXXXXXXXXXXXXXAKQ--QARPGSGLRSLNLAGNGIGCSGGVALAEALLNGGRKTTGGEGCVLEXXXXXXXALTLSAAQAAQAKKNSSLYKSAGGALSSLLNTFVDESYY----SNRGSSQGAASASTAPSSSWSSSLADPTGGEGGVAAP-RCAVAELGSALAGQGGXXXXXXXXS-------PSLKVLGLGRTGLSGRDAARLAATLRARPMDSPLEKVEVGMNGISAKACEAVRLAVESPTGPDDRSSK-ADDFE-TGGRGRRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDERAARG-EVGEYVPPGGSVELGMFGKNMASFHQARGAGSELDIEVFGKRVRFARPAAS 842
            +VA P   P  G   +A   V+M DFSFS LGP      DI     + +++E Q                   SALSLRECSLG+ G+AE+ RSPWV G A  RA+SLR NQV AAGVRALL+SLRS+  SGDRL+CLELDFNPIGDAG QPLPAYLKERAARGGGGLEELSLRFCDIGPAG  YLSSALLKSAAAA+ +              A D A       EA  T G                     ++ VL  PVASGIRRLLLTGNDRLGDAGA+ALASALKKD SL++LDLTRC  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +AGSS+ LE LELQGN +GDAGA+ALA+G  G   RGG                 XX  +KQ   +R G GLRS                            G  G VLE       ALTLSA+QAA   K+SSLYKSAGGALSSLL TFVDESYY    +NRGS Q A SA T PS      L +P GG      P RCAVAELG ALAGQG   XXXXXX        PSLK +GL RTGL+ RDAARLAA LRARP+DSPLE+VEVG+NG+S KA EA+RLAVESPT P DRSS   DD E  GGRGR                          XXXXXXXXXX                          +ER+ARG EVGEYVPPGGSVELG+FGK  ASF QA G+G ELD+EVFGKRVRF R   S
Sbjct:   18 AVAIPPHEPATG---NAPLEVQMLDFSFSPLGPRGLQDTDIDA---AGVVEEGQQH--------RHPNTNPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG--YLSSALLKSAAAAKIA--------------ANDDANSPAS--EAPTTAGXXXXXXXXXXXXXXXXXKKGGAEVVLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDNSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSA-LECLELQGNHVGDAGAVALADGLVGGNNRGG---------------RRXXGASKQGISSRRGPGLRSXXXXXXXXXXXXXXXXXXXXXXX-XXXXGEGGVVLEELELAGNALTLSASQAAAQAKSSSLYKSAGGALSSLLTTFVDESYYGGNSNNRGSVQDA-SALTPPS------LGNPAGGV--AERPLRCAVAELGEALAGQGARGXXXXXXXXXXXXGCPSLKAVGLARTGLTERDAARLAAALRARPVDSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGR--------------------------XXXXXXXXXXRHDPAAPGVDEPGLRSRRGTATAAPAEERSARGAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGS 711          
BLAST of mRNA_P-littoralis_Contig182.70.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 2.670e-82
Identity = 231/368 (62.77%), Postives = 256/368 (69.57%), Query Frame = 0
Query:  101 SVAGPSDAPVDGTRKSAMGAVRMFDFSFSELGPGSHLPADIVTPHPSALLDEQQDSDLQKXXXXXXXXXXXXXSALSLRECSLGNEGLAEMVRSPWVIGAAAARAISLRHNQVAAAGVRALLESLRSSDVSGDRLSCLELDFNPIGDAGVQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAARTSVGGXXXXXXVGGAFAKDQAEIEVESGEAEGTGGIVVPVSDAVLSRPVASGIRRLLLTGNDRLGDAGARALASALKKDRSLELLDLTRCNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYAGSSSVLESLELQGNRIGDAGALALANGFAG---RGG 465
            S+A P   PV G        V+M DFSFS LGP      DI     + +++E Q                   SALSLRECSLG+ G+AE+ RSPWV G A  RA+SLR NQV AAGVRALL+SLRS+  SGDRL+CLELDFNPIGDAG QPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAA+ S                                G     ++  L  P ASGIRRLLLTGNDR+GDAGA+ALASALKKD SL++LDLTRC  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLL+AGSS+ LE LELQGN +GDAGA+ALA+G  G   RGG
Sbjct:   71 SIAIPPREPVTGNTPLE---VQMLDFSFSPLGPRGLQDTDIDA---AGVVEEGQ--------HHRYPDTNSPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSAADSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKISANDDPNNSAXXXXXXXXXXXXXXXXXXXXXXKG----GAEFGLPPPAASGIRRLLLTGNDRIGDAGAKALASALKKDSSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHAGSSA-LECLELQGNHVGDAGAVALADGLVGGSKRGG 419          
BLAST of mRNA_P-littoralis_Contig182.70.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.140e-29
Identity = 161/346 (46.53%), Postives = 190/346 (54.91%), Query Frame = 0
Query:  174 SALSLRECSLGNEGLAEMVRSPWVIGAAAARAISLRHNQVAAAGVRALLESLRSSDVSGDRLSCLELDFNPIGDAGVQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAARTSVGGXXXXXXVGGAFAKDQAEIEVESGEAEGTGGIVVPVSDAVLSRPVASGIRRLLLTGNDRLGDAGARALASALKKDRSLELLDLTRCNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYAGSSSVLESLELQGNRIGDAGALALANGFAGRGGITSAXXXXXXXXXXXXXXXXXAKQQARPGSGLRSLNLAGNGIGCSGGVALAEAL 519
            S L L+ECSLG+ G  ++V S  V        +SLRHN +   G R+LL+ LR++    DRL  L LDFN IGDAG+QPLPA LK+ +    G LE LSLRFC I  AGCR ++SAL K+                                          V  SD         GIR L L GN  LGDAGA+ALA+ALK++ +LE LDLTRC  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L  G+SS+ + L+L  N I D GA A A   + + G   A                  +Q A PG    +L L  NGIGC G  ALA AL
Sbjct:   82 SGLLLQECSLGDRGALDVVSSTLVSSPEGVGVLSLRHNHIGRVGSRSLLQHLRTAP---DRLQTLVLDFNLIGDAGLQPLPALLKDSS---NGRLESLSLRFCGISAAGCRSIASALSKAQ-----------------------------------------VNASDR--------GIRHLSLAGNP-LGDAGAKALAAALKQNVALEELDLTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDGASSI-QRLDLDHNHIADGGAFAFARALSAKQGRNPASRSAQQQ-----------QQHAPPGV---ALGLVANGIGCEGCSALATAL 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.70.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLY3_ECTSI2.300e-15055.66Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JEB8_9PHAE2.670e-8262.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z931_9STRA1.140e-2946.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 435..462
e-value: 0.016
score: 24.4
coord: 232..259
e-value: 17.0
score: 8.4
coord: 643..670
e-value: 4.9
score: 12.2
coord: 348..376
e-value: 2.0
score: 15.0
coord: 200..227
e-value: 3.2
score: 13.6
coord: 494..521
e-value: 0.0018
score: 27.5
coord: 405..432
e-value: 9.7E-5
score: 31.8
coord: 265..292
e-value: 0.085
score: 22.0
coord: 377..404
e-value: 0.56
score: 18.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 706..734
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1019..1057
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 836..1076
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 973..988
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 851..865
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 935..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1101..1135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1089..1150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 887..909
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..114
NoneNo IPR availablePANTHERPTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGcoord: 156..430
coord: 350..553
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 174..692
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 268..286
e-value: 0.57
score: 10.4
coord: 377..399
e-value: 0.0031
score: 17.5
coord: 353..371
e-value: 1.8
score: 8.9
coord: 497..516
e-value: 0.22
score: 11.7
coord: 435..457
e-value: 0.0011
score: 18.9
coord: 405..427
e-value: 1.3E-4
score: 21.8
coord: 235..253
e-value: 1.0
score: 9.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 169..298
e-value: 1.5E-13
score: 52.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 491..584
e-value: 4.6E-5
score: 25.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 345..471
e-value: 7.8E-29
score: 102.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:239393..247213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.70.1mRNA_P-littoralis_Contig182.70.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig182 239393..247213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig182.70.1 ID=prot_P-littoralis_Contig182.70.1|Name=mRNA_P-littoralis_Contig182.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1150bp
SVGSLLRCAPIGLLQLIAVYACMASKVRRRYGDGLQLVASALVLLFSSLL
SCSGSGVADGAAAAAAAGASSGTSSAHSHQLKDTKDKDATTTATATATAA
SVAGPSDAPVDGTRKSAMGAVRMFDFSFSELGPGSHLPADIVTPHPSALL
DEQQDSDLQKQQQQDDACSSPPPSALSLRECSLGNEGLAEMVRSPWVIGA
AAARAISLRHNQVAAAGVRALLESLRSSDVSGDRLSCLELDFNPIGDAGV
QPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAARTS
VGGGGAGGGVGGAFAKDQAEIEVESGEAEGTGGIVVPVSDAVLSRPVASG
IRRLLLTGNDRLGDAGARALASALKKDRSLELLDLTRCNIGDDGARFLAD
ALRCNSSLRELRLGYNHISAEGASALASLLYAGSSSVLESLELQGNRIGD
AGALALANGFAGRGGITSAAAAAAAGGSRRRDRRGGAKQQARPGSGLRSL
NLAGNGIGCSGGVALAEALLNGGRKTTGGEGCVLEDLELAGNALTLSAAQ
AAQAKKNSSLYKSAGGALSSLLNTFVDESYYSNRGSSQGAASASTAPSSS
WSSSLADPTGGEGGVAAPRCAVAELGSALAGQGGGGGRGGKGSPSLKVLG
LGRTGLSGRDAARLAATLRARPMDSPLEKVEVGMNGISAKACEAVRLAVE
SPTGPDDRSSKADDFETGGRGRRQRERERHQQEQQPQQKQQQQQKRQQQQ
RRRRPRGGDDAASAAPGSTAEQARSRGAAAAASSDERAARGEVGEYVPPG
GSVELGMFGKNMASFHQARGAGSELDIEVFGKRVRFARPAASSAVVDESE
DELRWSDDDGIGDGVDFDDVSNAATYGSASSWSSDEEDGGDGSDSNDGDA
WDTDPGDDSDDFGGGGGGGSSAGDDHDDDGNRDTDSGSSGSGSGSGSGSE
NVLESRTFDVRGGGGSGSGEYLPTDRADRRRRRRQGEGEGAGGGYNDHGD
SEKGFERVASRETTETGGCGSDNDDDDTDDDDTDDGDTDDDDTGDTDDND
SDNDNEWAAGFEQEAPEEARGRNGEYAAGCGAAASAEKMEREVAFDGPSH
SSGDGTENGEWSAGSEAVSENNSDGGDSSCYAASGGSAASADKMEWEAGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf