prot_P-littoralis_Contig182.44.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig182.44.1
Unique Nameprot_P-littoralis_Contig182.44.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length106
Homology
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BLAST of mRNA_P-littoralis_Contig182.44.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.420e-29
Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0 
Query:   29 KRSRTLQHCIECGHKMRVGPFKKYHMQFLSSSQPKTCTVPGNLRREIKKPAQKNAVRKFGGECECTGDEQHPGGCE 104
            K  R  QHC+ECGHKMR+G FKKYH QFLS++QPK CTVP  LRR   +P Q+NA+RKFGGECECTGD  H GGC+
Sbjct: 1163 KPRRKPQHCVECGHKMRIGVFKKYHPQFLSAAQPKKCTVPEGLRRLAVRPTQQNALRKFGGECECTGDAAHLGGCK 1238
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE2.420e-2968.423'-5' exonuclease domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:181771..182088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.44.1mRNA_P-littoralis_Contig182.44.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig182 181771..182088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig182.44.1 ID=prot_P-littoralis_Contig182.44.1|Name=mRNA_P-littoralis_Contig182.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=106bp
GSSAGAAAAGSGDQGAPAGSGAVTGAPAKRSRTLQHCIECGHKMRVGPFK
KYHMQFLSSSQPKTCTVPGNLRREIKKPAQKNAVRKFGGECECTGDEQHP
GGCEM*
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