mRNA_P-littoralis_Contig182.12.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig182.12.1
Unique NamemRNA_P-littoralis_Contig182.12.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: D8LLZ6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLZ6_ECTSI)

HSP 1 Score: 810 bits (2091), Expect = 1.780e-288
Identity = 419/511 (82.00%), Postives = 453/511 (88.65%), Query Frame = 3
Query:  354 YQRAGYADPMEYREGEQGYSAGNDDRDNELQQHRHRRPDRFSWFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTDSGWRYMLGLSGVPSFFMTLGFLF--LPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAATDKDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYLYDDAVAAGQSASAERYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGDPPRPGE 1880
            YQRAGY  PME          G+ D   E  QH+ R  D  SWFVL LTVTSALGGFLFGYDTGVVSGAMLLIK DFSLS+WQEEVIVSVTIVAAVTAAV+GGPAME+WGRRP+ILLAA++FT+GAVMLAAA SY TLV GRLVVGVGIGLASLTTPVYIAEA+PS IRG+LVTLNTLFITVGQVVAG+VDGLFS TD GWRYMLGLSGVPSF MT+GFL   LPESPRWL+SAGRRREA+ VLQ+IRG+ DVH E+EEM+D+ATDK SGGLKAS+T RGLLEDPRIRRAL+LGCGLQLLQQL GINTVMYYSASIFSMAGFSD ASIWLAAVTAAAQSVGVCIGIYFIEKCGRR+L L+SLGMVS ALVLLG GF+LYDDAVA  +SA A+RYAY+VV TMM YLFTFGVGMSS+PWTVNAEIYPNHARSLGTSASTTVNW+GNVVVSATFLTLA+D ALGKDGAFWLYA +AVAGW WL+  MPETKGL LEEIELLFAR GDP RPG+
Sbjct:    8 YQRAGYTQPMED-------GGGDXDNSRETNQHQRRPDDHLSWFVLMLTVTSALGGFLFGYDTGVVSGAMLLIKQDFSLSDWQEEVIVSVTIVAAVTAAVAGGPAMERWGRRPVILLAAVVFTVGAVMLAAATSYSTLVGGRLVVGVGIGLASLTTPVYIAEASPSRIRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSFLMTMGFLSGALPESPRWLVSAGRRREAMEVLQKIRGTGDVHAELEEMVDSATDKHSGGLKASVTVRGLLEDPRIRRALILGCGLQLLQQLCGINTVMYYSASIFSMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHLYDDAVAVDESALAKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWVWLFCSMPETKGLPLEEIELLFAREGDPWRPGD 511          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A836CJI9_9STRA (Solute carrier family 2, member 13-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI9_9STRA)

HSP 1 Score: 491 bits (1265), Expect = 1.760e-162
Identity = 279/537 (51.96%), Postives = 339/537 (63.13%), Query Frame = 3
Query:  459 RRPDRFSWFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTDSGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAATDKDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYLY--------------DDAVAAGQS------------------------ASAERYA-------------------------------YVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGD 1862
            R PD  + +V+ LT+ +A GGFLFGYDTGVVSGAML I+ +  LS+ Q+E +VS TI AAV A+  GG A + +GRRP++L AA  FT GA +L AA  +G L+AGR VVG GIGLASLT PVYIAEAAP+ +RGRL+TLNTL IT GQ  AG+VDG  S    GWR+MLGLS  P+  M   FL LPESPRWLL+ GR  +A +VL+R+RG  DV  E+ E+     +    G+      R +L DP +RRAL+LGCGLQ LQQ  GINTVMYYSA+I++MAGFS+ ASIWLA  TA AQS GV IG+  IE+ GRR L+L+SL +V+ ALV LG  FYL               D A +A ++                        A+ E  A                               ++   +M+ YL  FG+G+SSVPWTVNAEIYP  ARSLGTS ST VNW GNVVVSATFL++AA  AL + GAFWLYA VAVAGW W    MPET GLSLEE+E LF R GD
Sbjct:   48 RPPDETTPYVIVLTLAAACGGFLFGYDTGVVSGAMLKIRAELGLSDVQQEAVVSATIAAAVVASALGGAASQAYGRRPVLLFAAATFTAGAALLGAAPGFGALLAGRAVVGAGIGLASLTAPVYIAEAAPTRLRGRLLTLNTLLITAGQFAAGMVDGALSAVPGGWRWMLGLSAAPALLMGAAFLVLPESPRWLLARGRADDAAAVLRRVRGVKDVSAEIAEVARGMEEHGDAGVGGGYGWRDMLRDPPVRRALLLGCGLQALQQFVGINTVMYYSATIYNMAGFSESASIWLAGFTALAQSGGVAIGMTLIERQGRRRLLLTSLALVAGALVSLGLSFYLQLVLSAGAVPGTEPADAACSAVRNVIFGPQPVDSCYRCLQIDGCGFCAATGECLAAAXXXXXGTDVLGRCDASQWKDAACSNGALGWLAALSMVAYLACFGIGLSSVPWTVNAEIYPQRARSLGTSVSTCVNWAGNVVVSATFLSIAAPTALSQHGAFWLYAAVAVAGWAWARAAMPETAGLSLEEVEALFERDGD 584          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A4D9CWR1_9STRA (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWR1_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 1.070e-143
Identity = 249/528 (47.16%), Postives = 331/528 (62.69%), Query Frame = 3
Query:  480 WFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTDSGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAATDKDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYLY----------------------------------------------------------------DDAVAAGQSASA---ERYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGD 1862
            +++  LT   A+   LFGYDTGVVSGA+L I++D  LS W++E+IVS+T + AV  ++SGG   E+ GRRP+ILL+++IFT+GAV++ AA S+  L  GR V+G+ IG +S+T PVYIAEAAPS IRGRLVT+N +FIT GQ VAG+VDG F+    GWRYMLG++ +P+    +G L+LPESPRWL++ GR  +A  VL+R+R S D+  E+ E+ D   D  +         R L   P IRRA+ LGCGL LLQQLSGINTVMYYSASI++MAGFSD  SIWLA  TA AQ VG+   +  +E+ GRR+LVL+SL +V+ +LV +G  FYL                                                                 D    AG  A       Y Y+ VA+M+ YLFTFG+GM ++PWT+ AEI+P H RSL  S +T+VNW+GNV++SATFLT+A+   L + GAFW+YA +A++G   L F +PETKG+ LEEIE LF + GD
Sbjct:  101 FYIFLLTGICAVSSLLFGYDTGVVSGALLSIRNDLQLSEWEQELIVSITTIGAVVGSLSGGFLTERAGRRPVILLSSVIFTLGAVVMGAAPSFFLLTLGRAVIGLAIGFSSMTVPVYIAEAAPSSIRGRLVTINCIFITGGQFVAGMVDGGFAEVPGGWRYMLGVAAIPAALQFIGVLYLPESPRWLVARGRVNDAKGVLKRLRASEDIAFELAEIED---DVAATASLPRARMRDLCASPPIRRAVTLGCGLMLLQQLSGINTVMYYSASIYNMAGFSDTTSIWLAGFTALAQFVGMLTNMSLVERWGRRTLVLTSLSLVTLSLVAIGASFYLAMASSQPVGVVDPSCARVHNVFVGSFPVTTCFQCVESASCGFCPALGACLPGNKTMDSLGTCPVGDGTGVAGPWAYTVCENPYGYMSVASMVLYLFTFGLGMGAMPWTICAEIFPLHVRSLANSLTTSVNWLGNVIISATFLTIASPHVLTQYGAFWMYAVIALSGLIGLAFTLPETKGVPLEEIEALFVKPGD 625          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: B7FYT5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYT5_PHATC)

HSP 1 Score: 442 bits (1137), Expect = 3.390e-143
Identity = 252/535 (47.10%), Postives = 333/535 (62.24%), Query Frame = 3
Query:  453 RHRRPDRFSWFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGT--DSGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAA--TDKDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYL------------------------------YDDAVAAG----------------------QSASAER---------YAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGD 1862
            R  R D+ +  +  LT  +ALGGFLFGYDTGV+SGAML+I+ +F L+ WQ+EV+VS T+++A  ++++GG     WGRRP ILLAA +FT+G+++L  A SY TLV GR++VGVGIGLASLTTP+YIAE A    RG+LVT+N L +T+GQ VAG+VDG+F G   ++GWRYMLGL+ +PS  M LGFL LPESPRWL    R+ +A  VLQ+ R   + H+     +D    T  D   L+       +L D   RRAL+LGCGL ++QQ SGINTVMYY+ASI+ M+GF++  ++WL+  TA AQ +G+ + I  +++ GRR LVL SLG V+ +L+ LG  FYL                              YD     G                       + SAE          + ++ V  M+ YLF FGVGM  +PWT+N+EIYP   RSL  S ST  NWIGN++V+ATFL+L++   L   GAFWLYA VA+ G  WLYF +PETKGLSLE+IE LF R GD
Sbjct:   72 RRVRADQVARRMRHLTTMAALGGFLFGYDTGVISGAMLMIRREFVLTPWQQEVVVSSTVLSAFFSSIAGGSLNRVWGRRPCILLAAAVFTVGSLVLGGAWSYRTLVLGRIIVGVGIGLASLTTPMYIAEMAAPTFRGQLVTINALLVTIGQFVAGMVDGVFHGLLPETGWRYMLGLATLPSMIMFLGFLALPESPRWLAMNHRQEDATKVLQQYR---ETHLPASSPVDVTLITMNDQRFLRHFFD---MLSDGPTRRALILGCGLMVVQQCSGINTVMYYAASIYVMSGFAESTAVWLSGFTALAQVLGIAVSIVLVDRMGRRQLVLGSLGAVAVSLLGLGLTFYLARVTSEPVSKAFGQCASQPASVWNGITAYCYDCTNIDGCGFCDGHCVRGNELAPLDLNMCPNTSAESWEFHTCHNAFGWLSVFFMVAYLFAFGVGMGGLPWTINSEIYPLRHRSLAVSCSTATNWIGNLIVAATFLSLSSPATLTTYGAFWLYASVAIVGLLWLYFALPETKGLSLEDIEKLFRRPGD 600          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A7S4MW95_9STRA (Hypothetical protein n=6 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MW95_9STRA)

HSP 1 Score: 431 bits (1109), Expect = 1.900e-139
Identity = 257/543 (47.33%), Postives = 325/543 (59.85%), Query Frame = 3
Query:  453 RHRRPDRFSWFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFS--GTDSGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSS-DVHMEMEEMIDAATDKDS------------GGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFY---------LYDDAVAAGQSASA-------------------------------------------------ERYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGD 1862
            R RR  R  ++   LT T+A+GGFLFGYDTGV+SGAML +K +F L+  QEEV+VS T+ AA   ++ GG      GRR  IL AA +FT+G++MLA+A +Y +LVAGR+VVG+GIG+ASLTTP+YIAE A   +RG+LVT+N L   VGQ  AG+VDG+FS  G + GWRYMLGL+ VPS  M  GFL LPESPRWL+ AG+ R+ALSVL  +R +  + H E+ E+IDA    D             GG +       +L     RRAL+LGCGL  LQQ SG+NTVMYYSASI+ M+GF D  SIWL+ +TA  Q  G+ + I  +E+ GRR LVL+SL  V+ +L  LG  FY         +Y D +   Q A+                                                    Y ++ V  M+ YL  FGVGM  +PWT+N+EIYP H RSL  S ST  NW GN++VSATFLT+A+   L   GAFWLY  VA+ G  WLY  +PETKGLSLEEIE LF   GD
Sbjct:   41 RSRRVRRQMFY---LTGTAAIGGFLFGYDTGVISGAMLPMKREFDLTPDQEEVVVSATVFAAFVFSLVGGTINSALGRRVAILFAASVFTVGSLMLASAWNYRSLVAGRVVVGIGIGVASLTTPIYIAEVAVPRMRGKLVTINALLCVVGQFSAGMVDGVFSQIGNEDGWRYMLGLAAVPSALMFAGFLTLPESPRWLVMAGKTRDALSVLSSVRDTDQEAHDELFEIIDANAVNDGNRKMEEEESMWHGGTRFLRRVVSMLCHAPTRRALLLGCGLMALQQCSGVNTVMYYSASIYQMSGFDDITSIWLSGLTALGQVAGLVLSILLVERAGRRLLVLTSLFFVTISLFGLGASFYYGRIMSAAVIYSDDLCQSQPATVWDGITAHCFDCAQIEGCGFCGGNCVLGSEVGPLNQSSCSTDEWLYDSCPNEYGWMPVMFMVAYLLAFGVGMGGLPWTINSEIYPLHHRSLAVSFSTATNWSGNMIVSATFLTIASPAVLTTHGAFWLYGAVALLGIIWLYSALPETKGLSLEEIEELFRMPGD 580          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A7S4J3H1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3H1_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 6.290e-130
Identity = 251/560 (44.82%), Postives = 331/560 (59.11%), Query Frame = 3
Query:  492 KLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLF---SGTDSGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIR----GSSDVHMEMEEMIDAAT-----------DKDSGGLKASITA-RG----------------LLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYL------------------------------------------------------YDDAVA--AGQSASAE----------RYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGDPP 1868
            +LT  +A+GGFLFGYDTGV+SGAML IK  F LS  QEE +VS TI+AA   ++ GG     +GRR   L AA +F++G+V+LAAA  Y +L+AGR++VGVGIG+ASLTTPVYIAE A   +RG LVT+N L + VGQ VAG+ DG F   +    GWRYMLGL+ VPS  M  GFL LPESPRWLL+ GR  EAL +L+ IR    G+S+  +E+ + + +AT             +SG L   +T  RG                +L DP  RRAL LGCG+  LQQ SGINTVMYY+ASI+ M+ F +  SIWL+  TA AQ +G+ + I+ +E+ GRR+LVL+SL MV+ +L  LG  F+L                                                       D A+   +G+ AS+E          +Y ++ V  M+ YL +FG+GM  +PWT+N+EIYP   RSL  S ST  NW+GN++VSATFLT++++  L   GAFWLY  +++ G  W+Y  +PETKGLSLEEIE LF R  D P
Sbjct:  222 RLTAVAAIGGFLFGYDTGVISGAMLPIKRTFDLSPSQEEAVVSSTILAAFVFSLIGGSINHTFGRRKSALFAAAVFSVGSVVLAAAWDYNSLLAGRVIVGVGIGVASLTTPVYIAEVAKPSMRGTLVTVNALLVCVGQFVAGMCDGFFDEIAARSGGWRYMLGLACVPSLGMFSGFLELPESPRWLLTKGRSGEALDILRSIRDTDHGASEELVEIMDALPSATAMTDSGHVSLSSAESGSLGGGVTGGRGRSARSREKHFCRRVWDMLSDPPTRRALRLGCGIMALQQFSGINTVMYYAASIYEMSEFDEITSIWLSGFTALAQVIGIALSIFLVERVGRRALVLTSLFMVTLSLFGLGTSFFLARISSLPVSSSHGLCRSQPAIVWSGITSYCYDCTRIESCGFCSGACVEGNKYGPLDPAMCPPSGEEASSEPDWVFDTCQNKYGWMSVFFMVLYLLSFGIGMGGLPWTINSEIYPLQHRSLAVSFSTATNWMGNLIVSATFLTISSEAVLTTYGAFWLYGAISLLGLFWMYCSLPETKGLSLEEIEDLFRRPRDDP 781          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A7S1ZU92_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZU92_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 8.070e-130
Identity = 251/563 (44.58%), Postives = 325/563 (57.73%), Query Frame = 3
Query:  453 RHRRPDRFSWFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTDS--GWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSS-DVHMEMEEMIDAAT----------DKDSG-----------GLKASITARG-------LLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYL-------------------------------------------------------YDDAVAAGQS-------ASAERYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGD 1862
            R  R    S+ +  LT  +A+GGFLFGYDTGV+SGAM  +K  F L+  QEEV+VS TI AA  A++ GG     +GRR  +L +A +FT G++ML+ A +Y +L+ GR+VVG+GIG+ASLTTP+Y+AE A   +RG LVT+N L I  GQ  AG+VDGLF   D   GWR+MLGL+ +PS  M +GFL+LPESPRWL  AG+  EAL VL+  R +  +   EM E++D+            D  SG           GL  S T +        +L D   RRAL LGCGL +LQQLSGINTVMYY+ASI+ M+ F+++ +IWL+  T+ AQ +GV + I  +E+ GRR+LVL+SL  V+ +L  LG  FYL                                                       +DD V            A   RY Y+ V  M+ YL +FG+GM  +PWT+N+EIYP   RS   S ST  NWIGN+VVS+TFLT+A+   L   GAFWLY  +A  GW WLY  MPETKGLSLEEIELLF +  D
Sbjct:  146 RRIRSSEVSYRMNYLTCVAAIGGFLFGYDTGVISGAMPPLKRAFDLTTKQEEVVVSSTIFAAFIASLWGGSLNNTFGRRIAVLFSASVFTFGSLMLSIAWNYSSLIFGRVVVGIGIGVASLTTPMYVAEIATPSMRGTLVTVNGLLICFGQFSAGMVDGLFETFDENDGWRFMLGLAAIPSVLMFIGFLYLPESPRWLAMAGKSGEALDVLRTFRDTDREAQEEMVEIMDSLATDVSMEDEDIDSRSGSNVSIEMSGNVGLTGSGTKKSSFSQIFDMLSDAPTRRALFLGCGLMVLQQLSGINTVMYYAASIYEMSQFNEKTAIWLSGFTSLAQVLGVGMSIRLVERKGRRTLVLTSLFFVTLSLCGLGLSFYLARISSSQVEAINDEQCFSQPAKVWDGVTANCYDCVQIDGCGFCAGVCAAGNDIGPFDDGVCNFNKGDEWIFGACENRYGYMSVFFMVAYLLSFGIGMGPLPWTINSEIYPLTHRSRAVSLSTATNWIGNLVVSSTFLTIASPSILTTYGAFWLYTALAFLGWCWLYCVMPETKGLSLEEIELLFRKDED 708          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A2C9JI74_BIOGL (MFS domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JI74_BIOGL)

HSP 1 Score: 406 bits (1044), Expect = 1.330e-129
Identity = 236/526 (44.87%), Postives = 323/526 (61.41%), Query Frame = 3
Query:  483 FVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTD-SGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAATDKDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQ-ASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYLY----------------------DDAV----------AAGQSASAE-----------------------------------RYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFAR 1853
            +V  LT  +A+GGFLFGYDTGV+SGAMLL++D FSLS++ +E+IVSVTI AAV +A++GG   + +GR+ + +LA+ +FT GAV+LA +++   LV GRL++G+GIG AS+T PVYIAE AP+H+RGRLVT+NTLFIT GQ +A V+DG FS     GWRYMLGL+GVPS     GF FLPESPRWL+  GR  EA ++LQR+RG+S+V  E++E+ +    +   G     T   +L  P +RRAL++GCGLQL QQL+GINTVMYYSA+I  M+G SDQ  +IWLAAVTA    +   +G++ +E+ GR+ LV+ SL  V+ +L+LL   F L                       D  V           +G S +                                      Y+++ +  ++ YL  F  GM  +PWT+N+EIYP  ARS G S S   NWI N++VS TFLTL   + L K G +WL+  +A+ G  +   C+PETKG  LE+IE LF++
Sbjct:   89 YVWLLTFFAAIGGFLFGYDTGVISGAMLLLRDKFSLSSFWQELIVSVTIAAAVVSALAGGFLNDWFGRKVVTILASFVFTAGAVVLACSSNVAMLVVGRLILGLGIGFASMTIPVYIAECAPAHLRGRLVTVNTLFITGGQFIASVLDGGFSYIKPDGWRYMLGLAGVPSLIQFCGFFFLPESPRWLMRKGRESEAHTILQRLRGTSNVDDELKEIKNTLQLESLNG--DGNTMLRILRTPAVRRALIVGCGLQLFQQLTGINTVMYYSATIIKMSGVSDQQTAIWLAAVTAGINFIFTIVGVWLVERIGRKKLVMGSLIGVTGSLILLAVTFQLVALMSPSNVPYHSNTTCSSYRSCDSCVDNSQCGYCYTGSGSSVNGSCLATSSKDTGHSDYGPCENATSLIGHTWASDYCPTSYSWMAILGLILYLMFFAPGMGPMPWTINSEIYPIWARSTGNSLSAATNWIANLLVSMTFLTL--TETLTKYGTYWLFVGIAILGLMFFGICLPETKGRKLEDIEDLFSQ 610          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: A0A7S2K800_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K800_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 1.820e-129
Identity = 243/572 (42.48%), Postives = 328/572 (57.34%), Query Frame = 3
Query:  423 DDRDNELQQHRHRRPDRFSWFVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTDSGWRYMLGLSGVPSFFMTLGF-LFLPESPRWLLSAGRRREALSVLQRIRGSSD-VHMEMEEMIDAAT---------------------DKDSGGLKA---------SITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYL-------------------------------------------------------YDDAVAAGQSASA-----ERYAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGD 1862
            DD ++ L + R R   R   F   LT  +A+GGFLFGYDTGV+SGAML +  DF+LS  QEE+IVS T+ AA  A++ GG      GRR  IL+A+ +FT+GA+++  A +Y +++ GR++VG+GIGLASLTTPVYIAE A   +RG+LVT+N L +T GQ +AG+VDG     D GWR+MLGL+ VPS  M +GF  FLPESPRWL++AG+  EA  VL+ +R S +    EM E++++                       D ++G             S+  + ++     RRALVLGCG+  +QQLSGINTVMYY+ASI+ MAGFS   SIWL+  TA  Q +G+   I+ +E+ GRR+L+L SL  V  +L  +G  FYL                                                       +DD++    S  +       +  + V  M+ YL  FGVGM  +PWTVN+EI+P   RSL  S +T  NW GN+++SATFLT+++   L   GAFWLY  ++VAG  WLYF +PETKGL LEEIE LF R GD
Sbjct:   12 DDENHALDEDRIRTVQRKMAF---LTGMAAIGGFLFGYDTGVISGAMLPLAKDFALSPVQEEMIVSSTVFAAFLASLVGGSLNNSCGRRFSILVASGVFTVGAIIMGFAWNYNSMLLGRIIVGIGIGLASLTTPVYIAEVAQPSLRGKLVTVNQLLVTFGQFIAGMVDGALGEVDHGWRFMLGLAAVPSLIMWIGFEFFLPESPRWLVAAGKHDEARVVLRGVRDSDEEADREMREIMNSCEAAKILENAFHHSEQSRLLGNDDAEAGQQXXXXXIPPPSFSMRVKAMVRSAPTRRALVLGCGIMAIQQLSGINTVMYYAASIYEMAGFSQITSIWLSGFTALGQVLGLVFSIFMVERAGRRTLILYSLFFVCLSLFGMGISFYLARVSSAAVDMVVDGECGSQPALVWNGLTSYCYDCVEIDSCGFCGSTCASGNDAGPFDDSLCPADSDWSFDNCPNPFGILSVVFMIAYLLAFGVGMGGLPWTVNSEIFPLQHRSLAVSFTTGTNWFGNIIISATFLTISSPAVLTSYGAFWLYTAISVAGLVWLYFVLPETKGLKLEEIENLFRRPGD 580          
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Match: UPI00065BE35B (proton myo-inositol cotransporter n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BE35B)

HSP 1 Score: 398 bits (1022), Expect = 3.460e-126
Identity = 233/529 (44.05%), Postives = 322/529 (60.87%), Query Frame = 3
Query:  483 FVLKLTVTSALGGFLFGYDTGVVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPLILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAAPSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGT-DSGWRYMLGLSGVPSFFMTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAATDKDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASIFSMAGFSDQ-ASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVSAALVLLGFGFYL--------------------------------------YDDA--------VAAGQSASAER------------------------YAYVVVATMMGYLFTFGVGMSSVPWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGAFWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFAR 1853
            +V  L   SA+GGFLFGYDTGVVSGAMLL++D+FSLS++ +EVIVSVTI AA  AA++GGP  + +GR+ + +LA+ +FT+GA++L AA++   LVAGR ++GVGIG AS+T PVYIAE AP+H+RGR+VT+NTLFIT GQ VA V+DG FS     GWRYMLGL+ +PS     GFLFLPESPRWLL   R  EA SVL ++RG+ +V  E+ E+ +    + +G  +A++    +L  P +RRALV+GCGLQL QQ  GINTVMYYSA+I  M+G SD+  +IWLAAVTAA   +   +G++ +EK GR+ L++ S+  V  +L ++   F L                                      Y D         V+   S +A                          ++++ V  ++ YL  F  GM  +PWT+N+EIYP  ARS G S S   NW+ N++VS TFLTL   + L K G +WL+  +++ G  +   C+PET+G  LE++E LFA+
Sbjct:   98 YVWLLASFSAVGGFLFGYDTGVVSGAMLLLRDEFSLSSFWQEVIVSVTIGAAFLAALAGGPLNDMFGRKIVTILASFVFTVGALVLGAASNISMLVAGRAILGVGIGFASMTVPVYIAECAPAHVRGRMVTVNTLFITGGQCVASVIDGGFSYVRPDGWRYMLGLAALPSLVQLCGFLFLPESPRWLLRKERDAEARSVLVKLRGTQEVDSEIAEIKEMLGAETAGQGRATLVR--MLSTPPVRRALVVGCGLQLFQQFGGINTVMYYSATIIRMSGVSDEHTAIWLAAVTAAVNFLFTLVGVWLVEKIGRKRLLMGSMIGVIFSLAVMAVAFQLAAYNSPAISEFDHGHLNTSCSSYRWCESCIEDTHCGFCYSDTSGSINGTCVSTHPSRNAHADFGRCENTTLPTGQVWAYDYCPTPFSWLAVMGLVLYLMFFAPGMGPMPWTINSEIYPLWARSTGNSLSAATNWVANLLVSMTFLTL--TETLTKYGTYWLFVCMSILGLAFFAKCLPETRGKRLEDVEELFAQ 622          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLZ6_ECTSI1.780e-28882.00MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CJI9_9STRA1.760e-16251.96Solute carrier family 2, member 13-like protein n=... [more]
A0A4D9CWR1_9STRA1.070e-14347.16MFS domain-containing protein n=3 Tax=Monodopsidac... [more]
B7FYT5_PHATC3.390e-14347.10Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4MW95_9STRA1.900e-13947.33Hypothetical protein n=6 Tax=Odontella aurita TaxI... [more]
A0A7S4J3H1_9STRA6.290e-13044.82Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1ZU92_9STRA8.070e-13044.58Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A2C9JI74_BIOGL1.330e-12944.87MFS domain-containing protein n=1 Tax=Biomphalaria... [more]
A0A7S2K800_9STRA1.820e-12942.48Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
UPI00065BE35B3.460e-12644.05proton myo-inositol cotransporter n=1 Tax=Aplysia ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:81207..84510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLZ6
Preferred nameSLC2A13
PFAMsSugar_tr
Model size2105
Max annot lvl2759|Eukaryota
KEGG koko:K08150
KEGG TC2.A.1.1.25,2.A.1.1.62,2.A.1.1.63,2.A.1.1.66,2.A.1.8
Hectar predicted targeting categoryother localisation
GOsGO:0000325,GO:0003674,GO:0005215,GO:0005351,GO:0005355,GO:0005365,GO:0005366,GO:0005402,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0008645,GO:0009705,GO:0009925,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015145,GO:0015149,GO:0015166,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015749,GO:0015791,GO:0015798,GO:0015850,GO:0016020,GO:0016021,GO:0016323,GO:0016324,GO:0022804,GO:0022857,GO:0022890,GO:0023052,GO:0031090,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045177,GO:0045178,GO:0046323,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090406,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098805,GO:0120025,GO:1901618,GO:1902600,GO:1904659
Exons5
Evalue1.39e-290
EggNOG OGsKOG0254@1|root,KOG0254@2759|Eukaryota
Ec32 ortholog descriptionSugar/inositol transporter
Ec32 orthologEc-14_002250.1
Descriptionglucose import
Cds size1860
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.12.1prot_P-littoralis_Contig182.12.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig182 81452..84510 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789877.750054-UTR-P-littoralis_Contig182:81206..814511680789877.750054-UTR-P-littoralis_Contig182:81206..81451Pylaiella littoralis U1_48UTRP-littoralis_Contig182 81207..81451 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789877.764277-CDS-P-littoralis_Contig182:81451..819841680789877.764277-CDS-P-littoralis_Contig182:81451..81984Pylaiella littoralis U1_48CDSP-littoralis_Contig182 81452..81984 +
1680789877.7732925-CDS-P-littoralis_Contig182:82336..825701680789877.7732925-CDS-P-littoralis_Contig182:82336..82570Pylaiella littoralis U1_48CDSP-littoralis_Contig182 82337..82570 +
1680789877.7855847-CDS-P-littoralis_Contig182:83051..833391680789877.7855847-CDS-P-littoralis_Contig182:83051..83339Pylaiella littoralis U1_48CDSP-littoralis_Contig182 83052..83339 +
1680789877.798069-CDS-P-littoralis_Contig182:83668..843391680789877.798069-CDS-P-littoralis_Contig182:83668..84339Pylaiella littoralis U1_48CDSP-littoralis_Contig182 83669..84339 +
1680789877.8111951-CDS-P-littoralis_Contig182:84376..845101680789877.8111951-CDS-P-littoralis_Contig182:84376..84510Pylaiella littoralis U1_48CDSP-littoralis_Contig182 84377..84510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig182.12.1

>prot_P-littoralis_Contig182.12.1 ID=prot_P-littoralis_Contig182.12.1|Name=mRNA_P-littoralis_Contig182.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=620bp
MQRSLLHNDMGRPGPDHEDSETQLGGGSHPDSPNLLYQRAGYADPMEYRE
GEQGYSAGNDDRDNELQQHRHRRPDRFSWFVLKLTVTSALGGFLFGYDTG
VVSGAMLLIKDDFSLSNWQEEVIVSVTIVAAVTAAVSGGPAMEQWGRRPL
ILLAAIIFTIGAVMLAAANSYGTLVAGRLVVGVGIGLASLTTPVYIAEAA
PSHIRGRLVTLNTLFITVGQVVAGVVDGLFSGTDSGWRYMLGLSGVPSFF
MTLGFLFLPESPRWLLSAGRRREALSVLQRIRGSSDVHMEMEEMIDAATD
KDSGGLKASITARGLLEDPRIRRALVLGCGLQLLQQLSGINTVMYYSASI
FSMAGFSDQASIWLAAVTAAAQSVGVCIGIYFIEKCGRRSLVLSSLGMVS
AALVLLGFGFYLYDDAVAAGQSASAERYAYVVVATMMGYLFTFGVGMSSV
PWTVNAEIYPNHARSLGTSASTTVNWIGNVVVSATFLTLAADDALGKDGA
FWLYAFVAVAGWGWLYFCMPETKGLSLEEIELLFARSGDPPRPGEAEGEG
SSGDGVGGARKTSDPVALSSSGGGWGFELLEGDADEVGGSGGGNNRAGAG
AGWIDPNITGGDGGSSKLA*
back to top

mRNA from alignment at P-littoralis_Contig182:81207..84510+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig182.12.1 ID=mRNA_P-littoralis_Contig182.12.1|Name=mRNA_P-littoralis_Contig182.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3304bp|location=Sequence derived from alignment at P-littoralis_Contig182:81207..84510+ (Pylaiella littoralis U1_48)
TGCATCGCAGTGCGGAGGGTGGCGTGCCTGCGATGCAATAGGGCTCCATC CCCGGTTGGGTTTTGGTATTTTGTTGTGCCTGCTCGCGAAGCAGAGGCAT GTGAACGTATGCCGCAGTTGTCTTGATCTCCCGGGCTTCTCCTCGGGCAC GCCAATACCCAACGAACTCTTTCGAACCGATACACACCCGACTGCAGTAA GTGTCCTACTTCGTGACCCTACTGCATAGAGGGGAGTACTACTTCATGCA ACGAAGCTTGCTTCACAACGATATGGGAAGACCAGGCCCCGACCACGAGG ACTCAGAAACCCAGCTCGGCGGTGGCAGTCATCCAGACTCGCCAAACCTC CTCTATCAACGCGCGGGTTATGCTGACCCCATGGAGTACAGGGAAGGCGA GCAGGGGTACAGCGCCGGCAACGACGACCGAGACAACGAGCTCCAGCAGC ACCGGCATCGACGCCCCGATCGCTTCTCCTGGTTCGTGCTCAAGCTGACG GTCACCTCCGCGCTCGGCGGGTTCCTGTTCGGGTACGACACCGGGGTCGT GTCTGGCGCGATGCTCTTGATAAAGGACGACTTCTCGCTGAGCAACTGGC AGGAGGAAGTTATCGTGAGCGTCACGATCGTTGCCGCGGTCACGGCGGCG GTGTCCGGCGGCCCCGCGATGGAACAGTGGGGCCGCCGGCCGCTTATCCT ACTCGCGGCGATCATCTTTACGATCGGGGCGGTGATGCTCGCCGCGGCCA ACTCGTATGGGACCTTGGTAGCTGGCAGGTTTGTACGCGTGTCTGTGTCT GTGTCTGTGTGTCTGGTGTGTCTGCGTGTGTGTTTGTGTGTTTTATGTCA TCGCATATGTCGATTGTCACGTTTTTTCGAATAGACAAAGCTGGATGGGC GAATCCCGCCGCTTGTTACGTCTGGTACGCATCAAACATATGGTGGCGTT TCGCTGACTCCTAGACATGTTGCACCGGCTGTTTCTATGCTCCCTTCTGC TCTGAGACGCCCAGATTCCGAAACAACAAGGCCGTACGATATACTTCCCT CATGCTGTGTGTGCACTTGTGAATGTCTTGTAACAGCAAGACCTACATGC GCACATATATTTATCGTGCGTGCAACACAGGCTTGTCGTAGGAGTGGGAA TCGGCCTGGCGAGCTTGACGACGCCGGTGTACATCGCCGAGGCCGCGCCC AGCCACATCCGCGGCAGGCTGGTGACGCTCAACACGCTCTTCATCACGGT GGGGCAGGTGGTGGCCGGCGTTGTAGACGGTCTTTTCTCGGGAACGGACA GCGGGTGGAGATATATGCTCGGCCTCTCCGGCGTGCCCAGCTTTTTCATG ACCCTGGGGTTCCTGTGAGTCGGTGGAGTCTACGGTACGGCAGCAGGCAG CAGCATTTTGGCACGTATGCATGGCAAAATGTATTTGTCGACGAGAGAAA ATTTCATGACGATGGTGGTGCTGCTACACACGCGCAGTTTTAGGTGTAGT GTTGTACTGCACTGCTTGTCGTGTTTAGCGACAGTAGGCGGCCCCGTTGT CGTGCTGCGCCATGTGATATAAAAGCGCACATCAGAACATAATTAGAAAG TGCACTAGTTTTTTCACTATCTTGTTTTACACGGGACAACCGACGTAGGC GGAGGAGAGAGTGGTTCTGCTGATATGATTATAACGAACAGGAGTGTGTG ATAGACATATTATGCCCCTCGCTCAACCGCCCCTGCCCAAAACAAATACC CGCAAGCCCCCATACCGCAATGCCACTACTACTTTTTTTCCTTCACATAA CGCCACCCAAAACATTCAAACAAAAGCAAAAAATTGAAACGTCAGGTTCT TGCCCGAGTCGCCGCGATGGCTCCTGTCGGCCGGACGACGGAGAGAAGCA CTGTCGGTGCTGCAGAGGATCCGTGGTTCCAGCGATGTGCACATGGAGAT GGAGGAGATGATTGATGCGGCCACGGACAAAGACTCTGGCGGGCTGAAAG CGAGCATTACGGCTAGGGGGCTGCTCGAGGATCCGCGGATCAGGAGGGCC TTGGTACTTGGGTGCGGGCTGCAGCTGCTGCAACAGCTCAGCGGCATCAA CACAGTCATGTACTACTCGGCCTCCATCTTCAGGTTGGAAAAAATATTTC GATCGTTGTAATTTCCTGTCTAGGTGGATGTCGCTTAGTACATTGTTGCC GGTTCCTCTATGGTCTGGAGCTGGAAATGTCATGCTCTTGGCGCACCTTC GGTGAAACGCATACGTGTATCGTAGGCTCGCCCGTATCTCTAGGAGTATC CACGCAAGTTTCCTACGCGAATCTGCCGCACACAAAGCATGGACCCGCAT GTGACGGTTCGAACCTGCTACCGCTCACTGCTGCGGCAGCAGTCAAAGGT TCTTCAGCCAATGTATACAAACCCGACCTCCTCTCTCTCCCACCCTCCTC GAACGAGTGCAGCATGGCGGGGTTTTCGGACCAGGCGTCCATTTGGTTGG CAGCGGTCACAGCGGCGGCGCAGTCGGTGGGCGTCTGCATAGGCATCTAC TTCATCGAGAAGTGCGGGCGTCGCTCCCTGGTGCTGTCTTCTCTCGGCAT GGTCTCGGCGGCTCTGGTGCTCCTGGGGTTCGGGTTCTACCTCTACGACG ACGCCGTGGCCGCCGGCCAATCAGCATCGGCGGAGAGGTACGCCTACGTG GTCGTGGCGACCATGATGGGGTACCTCTTCACCTTCGGGGTGGGGATGTC GAGCGTTCCCTGGACCGTCAACGCGGAGATCTACCCGAACCACGCCCGGT CTCTCGGCACCTCCGCGTCCACCACCGTGAATTGGATCGGCAACGTCGTC GTGAGCGCAACGTTCTTGACCCTCGCGGCGGACGACGCTCTCGGAAAAGA CGGAGCGTTCTGGCTCTACGCTTTCGTCGCGGTGGCCGGGTGGGGCTGGC TGTACTTCTGCATGCCGGAGACCAAGGGTTTGTCCCTCGAGGAAATCGAG CTCTTGTTCGCCCGCAGTGGAGACCCGCCGAGGCCTGGGGAGGCGGAGGG GGAGGGGAGCAGCGGCGACGGGGTGGGAGGGGCGAGAAAAACATCCGATC CTGTTGCGCTGAGCAGTAGTGGTGGAGGTTGGGGTGGTGGGGGGCGGCGC GCACCCTCGTCGTGCCGGAGGGTTCGAGTTGCTCGAGGGAGACGCGGATG AAGTCGGTGGCAGTGGTGGTGGCAACAATCGGGCGGGGGCAGGGGCAGGC TGGATTGATCCGAATATTACCGGTGGTGACGGAGGATCTTCTAAGCTGGC GTAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig182:81207..84510+

>mRNA_P-littoralis_Contig182.12.1 ID=mRNA_P-littoralis_Contig182.12.1|Name=mRNA_P-littoralis_Contig182.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1860bp|location=Sequence derived from alignment at P-littoralis_Contig182:81207..84510+ (Pylaiella littoralis U1_48)
ATGCAACGAAGCTTGCTTCACAACGATATGGGAAGACCAGGCCCCGACCA
CGAGGACTCAGAAACCCAGCTCGGCGGTGGCAGTCATCCAGACTCGCCAA
ACCTCCTCTATCAACGCGCGGGTTATGCTGACCCCATGGAGTACAGGGAA
GGCGAGCAGGGGTACAGCGCCGGCAACGACGACCGAGACAACGAGCTCCA
GCAGCACCGGCATCGACGCCCCGATCGCTTCTCCTGGTTCGTGCTCAAGC
TGACGGTCACCTCCGCGCTCGGCGGGTTCCTGTTCGGGTACGACACCGGG
GTCGTGTCTGGCGCGATGCTCTTGATAAAGGACGACTTCTCGCTGAGCAA
CTGGCAGGAGGAAGTTATCGTGAGCGTCACGATCGTTGCCGCGGTCACGG
CGGCGGTGTCCGGCGGCCCCGCGATGGAACAGTGGGGCCGCCGGCCGCTT
ATCCTACTCGCGGCGATCATCTTTACGATCGGGGCGGTGATGCTCGCCGC
GGCCAACTCGTATGGGACCTTGGTAGCTGGCAGGCTTGTCGTAGGAGTGG
GAATCGGCCTGGCGAGCTTGACGACGCCGGTGTACATCGCCGAGGCCGCG
CCCAGCCACATCCGCGGCAGGCTGGTGACGCTCAACACGCTCTTCATCAC
GGTGGGGCAGGTGGTGGCCGGCGTTGTAGACGGTCTTTTCTCGGGAACGG
ACAGCGGGTGGAGATATATGCTCGGCCTCTCCGGCGTGCCCAGCTTTTTC
ATGACCCTGGGGTTCCTGTTCTTGCCCGAGTCGCCGCGATGGCTCCTGTC
GGCCGGACGACGGAGAGAAGCACTGTCGGTGCTGCAGAGGATCCGTGGTT
CCAGCGATGTGCACATGGAGATGGAGGAGATGATTGATGCGGCCACGGAC
AAAGACTCTGGCGGGCTGAAAGCGAGCATTACGGCTAGGGGGCTGCTCGA
GGATCCGCGGATCAGGAGGGCCTTGGTACTTGGGTGCGGGCTGCAGCTGC
TGCAACAGCTCAGCGGCATCAACACAGTCATGTACTACTCGGCCTCCATC
TTCAGCATGGCGGGGTTTTCGGACCAGGCGTCCATTTGGTTGGCAGCGGT
CACAGCGGCGGCGCAGTCGGTGGGCGTCTGCATAGGCATCTACTTCATCG
AGAAGTGCGGGCGTCGCTCCCTGGTGCTGTCTTCTCTCGGCATGGTCTCG
GCGGCTCTGGTGCTCCTGGGGTTCGGGTTCTACCTCTACGACGACGCCGT
GGCCGCCGGCCAATCAGCATCGGCGGAGAGGTACGCCTACGTGGTCGTGG
CGACCATGATGGGGTACCTCTTCACCTTCGGGGTGGGGATGTCGAGCGTT
CCCTGGACCGTCAACGCGGAGATCTACCCGAACCACGCCCGGTCTCTCGG
CACCTCCGCGTCCACCACCGTGAATTGGATCGGCAACGTCGTCGTGAGCG
CAACGTTCTTGACCCTCGCGGCGGACGACGCTCTCGGAAAAGACGGAGCG
TTCTGGCTCTACGCTTTCGTCGCGGTGGCCGGGTGGGGCTGGCTGTACTT
CTGCATGCCGGAGACCAAGGGTTTGTCCCTCGAGGAAATCGAGCTCTTGT
TCGCCCGCAGTGGAGACCCGCCGAGGCCTGGGGAGGCGGAGGGGGAGGGG
AGCAGCGGCGACGGGGTGGGAGGGGCGAGAAAAACATCCGATCCTGTTGC
GCTGAGCAGTAGTGGTGGAGGTTGGGGGTTCGAGTTGCTCGAGGGAGACG
CGGATGAAGTCGGTGGCAGTGGTGGTGGCAACAATCGGGCGGGGGCAGGG
GCAGGCTGGATTGATCCGAATATTACCGGTGGTGACGGAGGATCTTCTAA
GCTGGCGTAG
back to top