prot_P-littoralis_Contig182.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig182.17.1
Unique Nameprot_P-littoralis_Contig182.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length388
Homology
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Match: D8LLZ5_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ5_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.250e-48
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0
Query:  289 RPAVAAATVGSTGPKDLSNAPVEVIDTAERYFEVLKENEDPDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQ 384
            RPAVAAATVGSTGPKDLS APVEVI TAERYFEVL+EN   D+IVVIKIYAGFCRACKAFDRKFRLLSLDF+EQGANVKFFEMDWMQ RDLCKSLQ
Sbjct:  109 RPAVAAATVGSTGPKDLSGAPVEVISTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQ 204          
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Match: A0A6H5JEA9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA9_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.930e-46
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0
Query:  290 PAVAAATVGSTGPKDLSNAPVEVIDTAERYFEVLKENEDPDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQ 384
            PAVAAATVGSTGPKDLS APVEVIDTAERYFEVL+EN   D+IVVIKIYAGFCRACKAFDRKFRLLSLDF+EQGANVKFFEMDWMQ RDLCKSLQ
Sbjct:  383 PAVAAATVGSTGPKDLSGAPVEVIDTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQ 477          
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Match: A0A836C9F2_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.220e-8
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
Query:  320 FEVLKENEDPDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQV 385
            FE   E    D++V+IK Y  +CRACKAFD K+R L L+ E+Q A   F+E+D   ++D+ + L +
Sbjct:    4 FEAAVEASHGDRLVIIKAYVPWCRACKAFDLKYRRLGLELEQQDAPASFYEIDVFAVKDVKQLLDI 69          
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR)

HSP 1 Score: 61.6 bits (148), Expect = 1.270e-7
Identity = 30/78 (38.46%), Postives = 51/78 (65.38%), Query Frame = 0
Query:  309 PVEVIDTAERYFEVLKENEDPDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQVG 386
            PV++I   E+Y +VL+E+ D   +VV+K++A +CR+C+A   K    + +F    +NV+FF+MD+ Q ++LC  L V 
Sbjct:   62 PVQLIHGVEQYLQVLRESSD--SLVVLKVFAPWCRSCRALTPKVNRFAREF----SNVRFFKMDYEQNKELCHRLGVA 133          
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN)

HSP 1 Score: 52.0 bits (123), Expect = 5.370e-5
Identity = 25/73 (34.25%), Postives = 44/73 (60.27%), Query Frame = 0
Query:  313 IDTAERYFEVLKENEDPDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQV 385
            ID  E +   ++   D D++V +K YA +CRACK+   +F  L+ +F   G  V+FFE+++   ++LC+ L +
Sbjct:    4 IDGDEAFLAAMQYCTD-DRLVAVKFYASWCRACKSIAPRFERLAKEFA--GDEVQFFEIEFAANKELCRRLNI 73          
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 7.460e-5
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 0
Query:  330 DKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQV 385
            DK+V IK YAG+CRACK    +F  L+ +F E+ A   F+E+++   +DLC+ L +
Sbjct:  131 DKVVAIKFYAGWCRACKTIAPRFERLAKEFGEEAA---FYEIEFSANKDLCRRLDI 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LLZ5_ECTSI1.250e-4890.63Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JEA9_9PHAE3.930e-4691.58Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A836C9F2_9STRA1.220e-842.42Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A2V3IJC0_9FLOR1.270e-738.46Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
F0YB20_AURAN5.370e-534.25Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S4A7N2_9STRA7.460e-542.86Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 316..385
e-value: 1.7E-6
score: 28.0
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 298..387
e-value: 1.7E-8
score: 36.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..113
NoneNo IPR availableCDDcd02947TRX_familycoord: 330..385
e-value: 5.83321E-5
score: 39.4637
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 302..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:85906..89237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.17.1mRNA_P-littoralis_Contig182.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig182 85900..89723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig182.17.1 ID=prot_P-littoralis_Contig182.17.1|Name=mRNA_P-littoralis_Contig182.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=388bp
MAPSLLQRCLASLLVTQCSLGDNAPPSLPTATALARARAAWSSHRSAAAF
LASPLVTGSSRGSLEQLLMGLRLGDAPASAVLDKPQQQQQLQPRQWQEDA
SAPRPAITTTTATAAAYSSMSSSRPQFTCWSKDQWTPRGALSLSGQQRPH
RQRETRLTWSKGQWSPSQPPVAGFLDSHGTTTTRLRGDGGERARGGWSKS
QWSPREWHAAEWSSSGSSSSLDSTRVAGEGGGIGGGAGVEVSAAGAGGGG
GGGAFTRSSFPPPAIAGAASFGGGRGSTYRAPTAATVSRPAVAAATVGST
GPKDLSNAPVEVIDTAERYFEVLKENEDPDKIVVIKIYAGFCRACKAFDR
KFRLLSLDFEEQGANVKFFEMDWMQMRDLCKSLQVGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf