mRNA_P-littoralis_Contig181.68.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig181.68.3
Unique NamemRNA_P-littoralis_Contig181.68.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A0A6H5K168_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K168_9PHAE)

HSP 1 Score: 647 bits (1669), Expect = 1.040e-226
Identity = 348/500 (69.60%), Postives = 377/500 (75.40%), Query Frame = 3
Query:  327 LQNDDNAFRLVRHPDTVELQTAAYKLAPRPSRGNGNQNGNKADRDDDAKDAGADVEITLVSMVHLADQDYYTEIMLDASSYDRVLFELIAGSDVSGLDARGNRAVTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRD-------------GKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQGFLEEVTRALVLGRQAGDNILPKFFPPLGSSLNKPALVLRALLWLAPCPEAEIMCYDWARSYPRAGGLSALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDTIVVKARNRVVVEETERALADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVIPTKSRSKKPMSAXXXXARMASPGAVAGTLEQGQGQXQGGVGMLGGEPGDDGMTRWGPLVVPALAYVAVGAWDWTDTVEALARSPRSPAQTRTACPIRGLWTPSRNLESGRPPSEAFGSALVVCTLYVARHA 1787
            L  DDNAFRLV++ D VELQTAAYKL PR S     ++G               V+I LVSMVHLADQ YYTEIM DASSYDRVLFELIAG  VS LDA GNRAVTEYVYPTREQD LARNYGL+AQLNCLNYC+LC  RTD G+S                     PRWVLADLTRD+IRSLQQ  GEKEIGQ GWQGF++EVTRALV+GRQAGD ILPKF+PPLGS+LN+PALVLRALLWL PCPEAEIMCYDWARSYPRAGGLS LAS+IA+SVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQS+ IVVKARN+VVVEETERAL +GCRKIM+LYGGLHMQDL+ QLCKQLD T++ AGWRTAWV+PTK+R K   +      RMAS  A AG LEQ QGQ    VGMLG E   DGM RWGPL V ALAYVAVGAWDWTDTVEALAR                       LE+   P EAFGSAL+V TLYVARHA
Sbjct:   67 LPKDDNAFRLVQYRDAVELQTAAYKLRPRTS-----EDG---------------VDIVLVSMVHLADQAYYTEIMRDASSYDRVLFELIAGPGVSELDADGNRAVTEYVYPTREQDDLARNYGLSAQLNCLNYCHLCKERTDDGTSXXXXXXXXXXXXXXXXXSNGGPRWVLADLTRDEIRSLQQQAGEKEIGQGGWQGFIDEVTRALVVGRQAGDKILPKFYPPLGSTLNRPALVLRALLWLTPCPEAEIMCYDWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSNAIVVKARNQVVVEETERALVEGCRKIMVLYGGLHMQDLTFQLCKQLDATQDIAGWRTAWVVPTKARQKANAATSPVPPRMASADAAAGRLEQAQGQ----VGMLGDETNADGMARWGPLGVAALAYVAVGAWDWTDTVEALARE----------------------LETDGSPLEAFGSALLVFTLYVARHA 520          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: D8LF12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF12_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 7.700e-111
Identity = 179/249 (71.89%), Postives = 194/249 (77.91%), Query Frame = 3
Query: 1041 MCYDWARSYPRAGGLSALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDTIVVKARNRVVVEETERALADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVIPTKSRSKKPMSAXXXXARMASPGAVAGTLEQGQGQXQGGVGMLGGEPGDDGMTRWGPLVVPALAYVAVGAWDWTDTVEALARSPRSPAQTRTACPIRGLWTPSRNLESGRPPSEAFGSALVVCTLYVARHA 1787
            MCYDWARSYPRAGGLS LAS+IA+SVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSD IVVKARN+VVVEETERALA+GCRKIM+LYGGLHMQDL++QLCKQLD T++  GWRTAWV+PT++R K   +      RMAS  A AG LEQGQGQ Q  VGMLG E   DGM RWGPL V ALAYVAVGAWDWTDTVEALAR                       LE+G PP EAFGSAL+V TLYVARHA
Sbjct:    1 MCYDWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDAIVVKARNQVVVEETERALAEGCRKIMVLYGGLHMQDLTSQLCKQLDATQDITGWRTAWVVPTRARQKANAATSPVPPRMASADAAAGRLEQGQGQGQ--VGMLGDETNADGMARWGPLGVAALAYVAVGAWDWTDTVEALARE----------------------LETGGPPLEAFGSALLVFTLYVARHA 225          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A0A835ZAI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI6_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.970e-74
Identity = 155/406 (38.18%), Postives = 213/406 (52.46%), Query Frame = 3
Query:  468 AKDAGADVEITLVSMVHLADQDYYTEIMLDASSYDRVLFELIAGSDVSGLDARGNRAVTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQ-GWQGFLEEVTRALVLGRQAGDNILPKFFPPLGSSLNKPALVLRALLWLAPCPEAEIMCYDWARSYPRAGGLSALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQ--------------------SDTIVVKARNRVVVEETERALADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVIPTKSRSKKPMSAXXXXARMASPGAVAGTLEQGQGQXQGGVGMLGGEPGDDGMTRWGPLVVPALAYVAVGAWDWTDT 1622
            A +A  D E+ L+S+VHLAD  YY ++  D++ YDR L+ELI     + + A G R VT  + PT  Q ALAR+YGLA Q+ CL                  D +    WVLAD++R+++++LQ+  GE   G++ G    ++EV +ALV+GR A   +LPKFF  L   LN  AL LRAL+WL PCPEA++M  DWAR++P AGG+SA+ S++ D VL+GD  TAKKL FAQQ+VSGQ  G                         S  +++  RN  V+ E  R+   G +++ ++YG LHM+DL  +L  +L   R    W TAW IP                          T  QG+             P  +   RW  +   ALAY AVGAWDW+DT
Sbjct:    2 ADNADGDFEVDLISVVHLADPSYYHQLQADSAIYDRYLYELITSETSTAIGADGLRRVTADMQPTEGQVALARSYGLAPQMMCL------------------DLRRHQHWVLADMSRERLQALQRESGEAVWGERLGIVEHMQEVGKALVVGRTADGRVLPKFF--LTGGLNASALALRALMWLMPCPEAQVMLLDWARAWPAAGGVSAVLSAVIDRVLAGDIATAKKLAFAQQLVSGQRSGXXXXXXXXXXXXXXXXXXXXXXXXXSADVLMTGRNAEVMRELRRSRLAGLQRVGVMYGCLHMRDLQERLRGELGMDRVGVRWVTAWDIPI----------------------GPATANQGR-------------PAAEEARRWATVAGAALAYTAVGAWDWSDT 352          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A0A6U9RMG6_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMG6_9CHLO)

HSP 1 Score: 166 bits (419), Expect = 1.210e-41
Identity = 104/308 (33.77%), Postives = 161/308 (52.27%), Query Frame = 3
Query:  480 GADVEITLVSMVHLADQDYYTEIMLDASSYDRVLFELIAGSDVSGLDARGNRAVTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQGFLEEVT---RALVLGRQAGDNILPKFFPPLGSSLNKPALVLRALLWLAPCPEAEIMCYDWARSYPRAGGLSALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDTIVVKARNRVVVEETERALADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVI 1394
            G+ V++ LVS+VH+A+ +YY  I    +S DRVLFE+I   +   +D  G + +   ++PT +Q   A  YGL +QL  ++ C+             R+G     W LADL +++++ LQ+   E   G   W    + +T   R LV GR  G                K  LV RALLW+ PCPEA ++  DWA    + G  + +   +A ++L+ D+  ++KL FAQ +VSGQA G      +T ++  RN   +    +A+ DGC++I +LYGGLHM+DLS +L  +LD  +    W   W +
Sbjct:   81 GSQVQVDLVSLVHVAEGEYYRRIQEQCASCDRVLFEMITTRENVKVDHGGRKTLKHRMFPTAQQIQTAGAYGLTSQLQSMD-CF-------------REG-----WYLADLEKEEVQKLQERAQEAVWGASAWGSCAQNITDALRLLVGGRSRGT--------------VKDKLV-RALLWITPCPEAGLLLLDWAW---QGGRPAPILLPLASALLALDYPASQKLVFAQDLVSGQASGFTATDPETTLIGKRNEAAIAAVSQAIEDGCKRIAVLYGGLHMKDLSRRLEVELDFYQTGEEWNVVWGV 351          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: C1N0I4_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0I4_MICPC)

HSP 1 Score: 120 bits (302), Expect = 1.910e-25
Identity = 113/351 (32.19%), Postives = 159/351 (45.30%), Query Frame = 3
Query:  447 KADRDDDAKDAGADVEITLVSMVHLADQDYYTEIMLDASS-YDRVLFELIA-------GSDVSGLDARGNR----------------AVTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQGFLEEVTRALVLGRQAGDNILPKFFPPL-----GSSLNKPALVL-RALLWLAPCPEAEIMCYDWARSYPRAGGLSALA-SSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDT-IVVKARNRVVVEETERALAD-GCRKIMILYGGLHMQDLSAQLCKQL--DTTREPAGWRTAWVI 1394
            +A R DD       VEI+L S VH+ +  YY  +  +  + YD VLFELI        G      DA G R                A+   + PT +  ALA  +GL AQL+ L+                RD     RW +ADL R  +      + + E G++G Q   ++ + A      A    LP     L     G +   PA  L R++ WL PCPEA ++  DW       GG  A A  +  D++ SGD   A++L FAQ IVS QA G   G +D  ++V  RN   +E   +A A  G  +I +LYGGLHM  L++++  +L  + T  P+ WR  W I
Sbjct:  103 RAPRGDDXXXXXXAVEISLTSTVHVGEPSYYAALQEECDARYDAVLFELITSEENLRPGRAPPPRDADGTRRXXXXXXXXXXXDFLPALAARLSPTPDARALAEAHGLRAQLDALDL--------------QRD-----RWFVADLPRSVLM-----RAQVEAGERGAQLSRDDASAA------ASAAALPPALEALVVTATGRAGGGPARQLTRSMCWLVPCPEAHLLLLDWV----WGGGRPAPALGATLDAIASGDVMAARRLAFAQMIVSAQAKGAVGGGADVPVLVLRRNDAAIECVRKAAATRGVNRIALLYGGLHMPGLTSKVMNELGYEITGAPS-WRAVWKI 418          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A0A090MBZ6_OSTTA (Unnamed product n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MBZ6_OSTTA)

HSP 1 Score: 109 bits (272), Expect = 8.440e-22
Identity = 118/383 (30.81%), Postives = 169/383 (44.13%), Query Frame = 3
Query:  312 DVSRDLQNDDNA-----FRLVRHPD--TVELQTAAYKLAPRPSRGNGNQNGNKADRDDDAKDAGADVEITLVSMVHLADQDYYTEIMLDASSYDR----VLFELIAG------SDVSGLDARGNRAVTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQGFLEEVTRALVLGRQAGDNILPKFFPPLG-SSLNKPA-LVLRALLWLAPCPEAEIMCYDWARSYPRAGGL-SALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDT-IVVKARNRVVVEETERAL-ADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVI 1394
            D   D  +DD+A      RLVR  +  T  LQ+A   L PR         G +A     A  +G   E+ + ++VH   ++YY  +  D ++ +R     L ELI          V G   +  R  TE + PT E  ALA  +GL+AQL+ L+       R +G             W +AD+TR+++ +L++  GE   G  G +      T    L   A            G S    PA L  R   WL PCPEA ++  DW      AGG  S +  ++ D   +GD  +A++L FAQ IVS QA G   G SD  ++V  RN V ++   +A  A    ++ +LYGGLH   L      +LD       WR AW +
Sbjct:   34 DARVDAPDDDSAATSQFLRLVRDDEDGTWALQSATVTLRPRL--------GARAT----ASTSGRGRELKVCALVHYGGEEYYRGVSRDFAAREREGAATLVELITSRANLIDGSVDGRGVKLFRLGTE-LGPTAEAKALAAAHGLSAQLDVLD------ARENG-------------WFIADVTREELIALREEAGELAGG--GGKAKTAVATLPPALEAMA--------VTAFGRSGARDPARLFTRLSCWLVPCPEAHLLLLDWV----WAGGRPSNVLGAMVDCCANGDLLSARRLAFAQMIVSAQARGPAGGGSDEPVLVARRNDVAIDGVRKAFNAPEIDRVNLLYGGLHAPGLVKCARDKLDMDVVDVEWRDAWRV 370          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A0A7S3UT33_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT33_HETAK)

HSP 1 Score: 102 bits (253), Expect = 1.030e-21
Identity = 65/174 (37.36%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  573 RVLFELIAGSDVSGLDARGNRAVTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQGF--LEEVTRALVLGRQAGDNILPKFF-PPLGSSLNKPALVLRALLWLAPCPEAEIMCYDWAR-SYPRAGG 1082
            RVL+ELI  +D   +D  G + ++ ++YPT EQ  LAR YGL AQL+ +++                   S   W +ADL RD I +LQ+ +GE   G      F  L E+ R +  GR     +LP FF P  G  L      +RALLW  PCPE  ++  DWAR + PR  G
Sbjct:    1 RVLYELIVSNDSVCVDEEGRKKISRHLYPTLEQVNLARQYGLKAQLDVMDFL------------------SKRNWYIADLDRDTIMALQEERGENSFGAPS-NAFSNLIELWRVVFQGRAPDGEVLPNFFLPGRGWGLG-----VRALLWATPCPELNLVLLDWARGTSPRGAG 150          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A4S4P5_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S4P5_OSTLU)

HSP 1 Score: 107 bits (268), Expect = 2.950e-21
Identity = 95/315 (30.16%), Postives = 143/315 (45.40%), Query Frame = 3
Query:  495 ITLVSMVHLADQDYYTEIMLDASSY--DRVLFELIAG-SDVSGLDARGNRA--VTEYVYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQGFLEEVTRALVLGRQAGDNILPKFFPPLG------SSLNKPA-LVLRALLWLAPCPEAEIMCYDWARSYPRAGGL-SALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGG-GNWGQSDTIVVKARNRVVVEETERAL-ADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVI 1394
            + + ++VH  +  YY  +  D  +   D  L ELI     +   D RG +   ++E + PT E  ALA  +GL AQL+ L+             +R+R       W +AD+TR+++ +L++  GE            EE TR       +    LP     L       +S   PA L  R   W  PCPEA ++  DW      AGG  S +  ++ D   SGD  +A++L FAQ IVS QA G    G ++ ++V  RN V ++   +A  A     + +LYGGLH+  L     ++LD       WR AW +
Sbjct:   94 LRVCALVHYGEARYYRGVAKDFETRENDATLVELITSRKHLEASDERGLKLWRLSEALAPTAEARALANAHGLRAQLDALD-------------ARARG------WYVADVTREELIALRREAGEMTAK------TAEETTRNAKRSAVSMGGNLPPALEALAVTAFGRASEGDPARLFARLSCWFVPCPEAHLLLLDWV----WAGGRPSEVLGAMVDCCASGDLESARRLAFAQMIVSAQAEGPAGGGSTEPVLVARRNDVAMDGVNKAFKAPEIDTVNLLYGGLHVPGLVRCARERLDMEVVDVAWRDAWRV 379          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: C1FJM4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJM4_MICCC)

HSP 1 Score: 103 bits (256), Expect = 1.520e-19
Identity = 96/340 (28.24%), Postives = 141/340 (41.47%), Query Frame = 3
Query:  492 EITLVSMVHLADQDYYTEIMLDASS-YDRVLFELIAG-----------SDVSGLDARGNRAVTEY---------------VYPTREQDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGEKEIGQQGWQ------GFLEEVTRALVL---GRQAGDNILPKFFPPLGSSLNKPALVLRALLWLAPCPEAEIMCYDWARSYPRAGGLSA-LASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDT-IVVKARNRVVVEETERAL-ADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVI 1394
            E+ L + VH+ D  YY  +  +  + YD VLFELI G           S   G    G+    ++               + PT +   LA  + L  QL+ L+ C         G +          W +AD+ + ++  LQ   GE  +                    ALV+   GR  G         PL  +        R + WL PCPEA ++  DW       GG  A +  ++ DS+  G+   A++L FAQ IVS QA G   G +D  ++V+ RN V  E   +AL A G  ++ +LYGGLHM  L+ +L +QL        WR  W +
Sbjct:  144 EVALAATVHVGDPTYYQGLQEECDADYDAVLFELITGEENLREGRAPESTRGGARHGGDEDEDDHNRDRRDPFLPQLAVALAPTPDARRLADTHFLVPQLDALDLC---------GDN----------WYVADMPKQELARLQAEAGEAMMATSSRSVPGPSVPTTSPALEALVVTAKGRAGGG--------PLRQAT-------RLVCWLVPCPEAHLLLLDWV----WGGGRPAPVLGALLDSLAGGNIIAARRLAFAQMIVSAQAKGAVGGGADVPVLVERRNDVATECLAKALDAPGVSRVSLLYGGLHMPGLTRRLTEQLGLEPSTQRWRAVWRV 445          
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Match: A0A0K9PY14_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PY14_ZOSMR)

HSP 1 Score: 97.1 bits (240), Expect = 8.950e-18
Identity = 85/325 (26.15%), Postives = 148/325 (45.54%), Query Frame = 3
Query:  489 VEITLVSMVHLADQDYYTEIMLDASSYDRVLFELIAGSDVSGLDARGNR-AVTEYVYPTRE----------QDALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDKIRSLQQSKGE------KEIGQQGWQGFLEEVTRALVLGRQAGDNILPKFFPPLGSSLNKPALVLRALLWLAPCPEAEIMCYDWARSYPRAGGLSALASSIADSVLSGDFFTAKKLGFAQQIVSGQAGGGNWGQSDTIVVKARNRVVVEETERALADGCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVIPTKSRS 1412
            +++ LVS +H+AD++Y+  +  D   YD VL+E++   +   L+ R N+ +V +    +R           Q  +AR   L  QL+CL+Y                D K    W  ADL  +  + LQ  KGE      K++  +  +  +E+ T             +PK   P  S L + + V        P P   I+    +  +P   G++   +   +++   D   A K+  A+++ S  A   +  + +++++  RN+V +EE +RA+ DG R I ILYGG HM DL  +L ++ +       W TAW+I  + R+
Sbjct:   92 LQVDLVSTIHIADKEYFKLLQKDLEQYDCVLYEMVTSRE--SLENRKNKTSVKKLTSSSRRSKGFNIIGFIQKQMARILSLDFQLDCLDY---------------EDDK----WCHADLDYETFKELQNEKGESFFTFAKDVTIRSTKAIVEQTT-------------IPKDLTPWKSKLLQASRVF-------PMPLFGILIIG-SVCFPLENGVTQ--NPEMEALFKLDIGAAMKIFLARRLTSEFAQITSAIEEESVIIGERNKVAMEELQRAIDDGNRSIAILYGGGHMPDLGRRLREEFNMVPSEVQWVTAWLIKNQKRN 372          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig181.68.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5K168_9PHAE1.040e-22669.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF12_ECTSI7.700e-11171.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAI6_9STRA1.970e-7438.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U9RMG6_9CHLO1.210e-4133.77Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
C1N0I4_MICPC1.910e-2532.19Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A090MBZ6_OSTTA8.440e-2230.81Unnamed product n=2 Tax=Ostreococcus tauri TaxID=7... [more]
A0A7S3UT33_HETAK1.030e-2137.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A4S4P5_OSTLU2.950e-2130.16Uncharacterized protein n=2 Tax=Ostreococcus sp. '... [more]
C1FJM4_MICCC1.520e-1928.24Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A0K9PY14_ZOSMR8.950e-1826.15Uncharacterized protein n=1 Tax=Zostera marina Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig181contigP-littoralis_Contig181:409696..414655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog55529.EKX39281
Model size1787
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue1.92e-28
EggNOG OGs28I0W@1|root,2QQBM@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-21_006300.1
Cds size1713
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig181.68.3prot_P-littoralis_Contig181.68.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig181 409696..414581 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789876.6538467-CDS-P-littoralis_Contig181:409695..4098431680789876.6538467-CDS-P-littoralis_Contig181:409695..409843Pylaiella littoralis U1_48CDSP-littoralis_Contig181 409696..409843 -
1680789876.6741874-CDS-P-littoralis_Contig181:410100..4102781680789876.6741874-CDS-P-littoralis_Contig181:410100..410278Pylaiella littoralis U1_48CDSP-littoralis_Contig181 410101..410278 -
1680789876.6860123-CDS-P-littoralis_Contig181:410672..4108141680789876.6860123-CDS-P-littoralis_Contig181:410672..410814Pylaiella littoralis U1_48CDSP-littoralis_Contig181 410673..410814 -
1680789876.6970623-CDS-P-littoralis_Contig181:411564..4117061680789876.6970623-CDS-P-littoralis_Contig181:411564..411706Pylaiella littoralis U1_48CDSP-littoralis_Contig181 411565..411706 -
1680789876.7124052-CDS-P-littoralis_Contig181:412037..4121421680789876.7124052-CDS-P-littoralis_Contig181:412037..412142Pylaiella littoralis U1_48CDSP-littoralis_Contig181 412038..412142 -
1680789876.7282205-CDS-P-littoralis_Contig181:412745..4129211680789876.7282205-CDS-P-littoralis_Contig181:412745..412921Pylaiella littoralis U1_48CDSP-littoralis_Contig181 412746..412921 -
1680789876.7428792-CDS-P-littoralis_Contig181:413067..4132921680789876.7428792-CDS-P-littoralis_Contig181:413067..413292Pylaiella littoralis U1_48CDSP-littoralis_Contig181 413068..413292 -
1680789876.7544343-CDS-P-littoralis_Contig181:413984..4145811680789876.7544343-CDS-P-littoralis_Contig181:413984..414581Pylaiella littoralis U1_48CDSP-littoralis_Contig181 413985..414581 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789876.7670426-UTR-P-littoralis_Contig181:414581..4146551680789876.7670426-UTR-P-littoralis_Contig181:414581..414655Pylaiella littoralis U1_48UTRP-littoralis_Contig181 414582..414655 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig181.68.3

>prot_P-littoralis_Contig181.68.3 ID=prot_P-littoralis_Contig181.68.3|Name=mRNA_P-littoralis_Contig181.68.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=571bp
MTRSLTRRRSKATFYGAVPALWSIMVLSALQNGSAFQARSFNFVRCQTAS
PSGLPLQRAQPARLAASSAAAAAATAATEDVSRDLQNDDNAFRLVRHPDT
VELQTAAYKLAPRPSRGNGNQNGNKADRDDDAKDAGADVEITLVSMVHLA
DQDYYTEIMLDASSYDRVLFELIAGSDVSGLDARGNRAVTEYVYPTREQD
ALARNYGLAAQLNCLNYCYLCTLRTDGGSSRSRDGKSTPRWVLADLTRDK
IRSLQQSKGEKEIGQQGWQGFLEEVTRALVLGRQAGDNILPKFFPPLGSS
LNKPALVLRALLWLAPCPEAEIMCYDWARSYPRAGGLSALASSIADSVLS
GDFFTAKKLGFAQQIVSGQAGGGNWGQSDTIVVKARNRVVVEETERALAD
GCRKIMILYGGLHMQDLSAQLCKQLDTTREPAGWRTAWVIPTKSRSKKPM
SAKPMSARMASPGAVAGTLEQGQGQGQGGVGMLGGEPGDDGMTRWGPLVV
PALAYVAVGAWDWTDTVEALARSPRSPAQTRTACPIRGLWTPSRNLESGR
PPSEAFGSALVVCTLYVARHA
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mRNA from alignment at P-littoralis_Contig181:409696..414655-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig181.68.3 ID=mRNA_P-littoralis_Contig181.68.3|Name=mRNA_P-littoralis_Contig181.68.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4960bp|location=Sequence derived from alignment at P-littoralis_Contig181:409696..414655- (Pylaiella littoralis U1_48)
CGATGACACAGGATCCCACCCCACATAACTAGGAAGCTCGCCGACACCAA GTGCTCCCCTCCCCTCCTGGAGCCATGACTCGCTCCCTGACTCGCCGACG GTCAAAAGCTACGTTTTATGGTGCGGTTCCGGCACTTTGGTCAATTATGG TGCTCAGCGCGCTACAGAATGGCTCCGCATTCCAAGCAAGAAGTTTCAAC TTCGTCCGTTGTCAAACAGCAAGTCCAAGTGGGCTACCGCTCCAGCGTGC ACAGCCTGCGAGACTCGCCGCGTCCTCTGCTGCTGCAGCCGCTGCAACTG CTGCTACCGAGGACGTGAGCAGAGATCTACAGAACGACGACAACGCTTTC CGACTAGTCCGGCACCCTGATACTGTAGAGCTTCAGACCGCCGCGTACAA GTTAGCACCACGACCGAGTCGAGGAAATGGAAATCAAAATGGAAATAAGG CGGACAGGGATGACGACGCGAAAGACGCTGGTGCCGATGTGGAGATCACG CTTGTCTCGATGGTTCACTTGGCGGATCAGGACTACTACACAGAGATAAT GCTCGATGCTTCTTCGTACGATCGCGTGCTGTTCGAGCTGATTGCTGGAT CGGACGTGTCTGGGCTGGATGCTCGTGGCAATAGAGCTGTCACGGAGTAC GTCTACCCCACGAGGGAACAGGTTGGGACGACACAGCACAGCCGCAGTAC GTAAAAAATGTCGGGCCTATCTTGACATACTTCCGTATTTCCGAACTGCG TGCACAGACAGAGTTGCAGAGTTTCAGACTCCCCCTGAAGAAGGCGGTAC TACGCACGTGCAGTACGGTGTGACCTCAGTTCCTCGTGTGCAGAATAAAG TCGGCATGTTGTGGTGCAAAGCATACTACTACAGCCGTACATACCGTTGT GCTTCGCCGAAAATGGCAATACTTCTGTGTCATCATCAATCAGCTTCATG TACACCGCCTCGAAATGTAGTACAAGTAGGTCAGTCAGTGCAGTTGCTCG AAGGAAACGAATGCCAGCTGGTGGCATGATATGGTTTTCATGCTCCCTCA AACGAACAATTACCCAAGAGTACGAAGTATTTGTTAAGAAGTCGTTTCAT TATGGCCACCAACGCTGTATGCACTACGCACCGCCCAAGAGAAATACCTG GTGTCGTGAAGGGCTTTACGTTACAACACACTTGATGCACGGCACACGGC ACGAGCGCGATCATACCCGTGGTATGCTATGATCCACAACTTGACTTCCG CAACGGGAGCATTCTTGTTGATTTGGTAAGTCAACCTCGAAAGAGATGCC TGAGTGGTGTACGTAACATTGCTGGTATGATGATGACGACGATCTGGCGT ACACACGTGCCAGGACGCCTTGGCAAGGAACTACGGTTTGGCGGCGCAGT TGAACTGTCTCAACTATTGCTACCTGTGCACCTTGCGCACGGATGGCGGC AGCAGCAGGAGCAGGGACGGCAAGAGCACCCCGCGTTGGGTCCTCGCTGA CTTGACCCGGGACAAGATACGTTCCCTGCAGCAAAGCAAGGGGGAGAAGG AGATAGGTCAACAGGGGTGGCAAGGCTTCCTGGAAGAGGTAATGTTTCGA TAGTTGATCCCATGCGCTTGCGTGAGAAAATGAGATACCTCGTAAAATAT AATGACGATAACTTAAACTCATAACAGTGGACCATCCCACCCATTGATGA TAACCATCAACTACAAACGCCGTTGACCTCGCAGGTGACGAGGGCGTTGG TACTGGGCAGGCAGGCGGGAGACAATATTTTGCCCAAGTTCTTCCCGCCT TTGGGCAGTTCGCTCAACAAACCGGCGCTCGTCTTGCGAGCCTTGCTGTG GTTGGCGCCTTGCCCTGAGGCGGAAATCATGTGCTACGACTGGGCAAGAT CTTACCCCAGGTCGGTCGCTCTACATGGCCGGACCAACCTGCCCTTGCCT CTTGATGTGCTATTCTTGCCGTCTTGGGATACAAGCATGCTGAAGCCGTC GTTGCGCTCTTCCTCTTGAATGTGTTTGTTTTTCATACTTCCCCGAAGCG TTCGAGTAGCCCAACGACGAAACCAGGGGCTGTGCAAGGAGTTTCCCACT TACACCACAGATCAGCAACTTAGCATGTCGTTCTCATGCGCCTCCGCGCT GAAATAATTTTGCCGGTTCAGAAGCTGCCCTGCGACCCAGTACTTCGTTC GGCGCCGCCACGCACGGACTTACTAAAACCCCAACCGCCAACGGCATAGA CGAAAACGAACGGAGAAAACCTGACACACAGAGAAATTGTGTTGTCCAAC AACAACGAAGAAGCGATGACGATACGATAGAAGCCGCCAATAGTGGTGCC GACGAATGACGATGCCAAAGACCGGACCCACAATATCAACGAAATTTCAC ATTACTAAGAACAAGCCAGCGCTTTTCCTTTTCGACCCCAAAGCGCATTG TGTTGACGTGAACGACTGCCCGCTGCCTGTTGTCTACTGTACATGGTGTG CCGATTTCGACAGGGCCGGCGGACTGTCTGCACTGGCGTCTTCAATCGCG GACAGCGTGCTGTCAGGAGACTTCTTCACCGCCAAAAAACTAGGCTTCGC TCAGCAGATAGTATCCGGGTAAGGAAAGGGGAATCCGGGAGGGACGGGCA CCACTTCGCCCAACTGGACATTACATCCTGGTGCCATATTCTCGTGTCGT TCACGTGCCGCTTCAGAGTCCCATCTCGTTCCTCCATTCACGTAGCGCTG TCAAAACTGGCGCATACACTGCTAAAAAGTCAGCAAAGGCAGGACTGCTG CTTGTGGACACAAGCCACGACCATCTCGACGTTCGATTAGGCCACGCGTA CAAAAATGTGCTTTGCGGAAACGTTCCGTCTTAGGGTCACGTCGCTGCTA CTTCTTTTTTTACTCTTCCTTGCTCCGTCTGCCGTGGTGAACGAGACAGG CAAGCTGGCGGGGGAAACTGGGGGCAATCGGACACGATTGTCGTGAAAGC AAGGAACCGAGTGGTGGTGGAGGAGACGGAGCGTGCCCTCGCAGATGGGT GCCGTAAAATCATGATTCTCTACGGCGGATTGCATATGCAGGTAAGCCAG CATACCCCAGAAGGTACTACAGCAGTTACGTCCCTTTCAACTTGCGAGGT CAAAATCAGCCACCCAAGCCAGGACGCTGAACTGGATATAGCCCAAGCCA GGACGCTGAACTGAATATTTACTGCCGCAATGACAGCATGTGTGTGTGTC ATGTTTTGGTATGACGCTCGATTGTGTATGGCGAAAACATCTTGCGATGG CTCGCTCGATGTCTAAGTAATCATGGAACCACGTTAATATTAATGTTGTC TAACGCACTCCTGTTTTTCGGTTCAGTTGACTTCGTAAGTTGCCGTCATT ACCATCGTGTATCTCCGAGTGACCTCTCGAACCGAGATTTTCATTTGAGC AGCACCCTCAAATTTGTCGCGAGATTGCGGGTGTGCTGCCATCCTATTTA GTCAGAACGCCTGTTTACACATCTCGGTATACGCTGGGCGCACCAGCTGG GGTGGGGGGGGGTCACAGACAGGATTGTGTTTCTCACTCCACTTTCCTTC TTCGGTGCTTGCCTTGCTGCTGTAATTTAATTTCTATCTCGAGAAGGCAG GCTTCAGTTCGGCCATCCCTTTCCGTCGTCGACGTTCTTTTTTGTTTCGA GCCCGGTTTTGCAATTTCACATCTTTGCTTTCCACTCCTAGGATTTGGGT GAGTTCAGGCTGTATTTTGATTGCGAACTGCCCTTATCCTGACATGCTGA GTCGGGTGTCCCCGCATTGTTTTCCGTGTCGAGGGTTGCAGGACTTAAGC GCTCAGCTCTGCAAACAGCTGGACACTACGCGGGAGCCTGCCGGCTGGAG GACCGCATGGGTGATACCGACGAAATCGAGATCGAAGAAACCAATGTCAG CAAAACCAATGTCAGCCCGGATGGCGTCACCAGGTGCGGGTGTGATCATT CATTTGGCTGTGGATCCTCCGCTGGCTTTGATAGCTCATCTCCGAACTTT AGCCTGGTGTGTACGGCGCGAGCACTTGTTGCGCCGCCACAGTCCAATCG TGTCTTGGGATCTCCCCTCTTGCGGTTGCGGCCCATATCAATATATCACC GGTATGCGGGGTTGTTCTAGAAGTGTCTTCGTGTTTGACTTTGTAAGTAC AAGTGATCGACCGTATTTTTTTTTCATGTACTTGTATGATACAGCAGTGC AACTTCATGATTCCCAGCAGCAAGTCAGTCAATAACGGCCTCATGCGTTT GGCATTCGACAGCGGTGGAAAGTCCGCCTTCTGACGTGACATCCTCCCGG CGATCCCTACGCATTCCATTTCACCAGGCGCAGTAGCGGGAACGCTGGAA CAAGGGCAAGGGCAAGGGCAAGGGGGAGTCGGCATGCTGGGAGGCGAGCC GGGAGACGACGGCATGACTCGGTGGGGGCCGTTGGTAGTTCCAGCTCTGG CCTACGTGGCGGTCGGAGCGTGGGATTGGACCGACACCGTCGAGGCTCTA GCAAGGTTCGTGTGATTTGCCACATGGTGCTCTGGGGTACTTTTCGTTGG GGGTGTAACATACACTCAATTGTGGCGACTTTACGCTCTACCAGGTACAT CAGCATCGGCGTGTTGGATTATCTTGGGGCTGTGCTTTTGAGAATTTTTC CCCCACGCTTTAGACTCGTGGTGAGCTGTCGATACACTAACGGTGGTCAC TATACTCTCACGAGCTGTGCACACGTACGCCATCTCCGTCGTGACACTTG CCCTATAGATAGATCGCCTCGTTCTCCTGCACAAACCAGAACTGCATGCC CAATACGTGGCTTGTGGACGCCAAGCAGGAACCTGGAAAGCGGCAGACCA CCCTCTGAAGCGTTCGGATCGGCGCTGGTCGTCTGCACGCTGTACGTGGC TCGCCACGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig181:409696..414655-

>mRNA_P-littoralis_Contig181.68.3 ID=mRNA_P-littoralis_Contig181.68.3|Name=mRNA_P-littoralis_Contig181.68.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1713bp|location=Sequence derived from alignment at P-littoralis_Contig181:409696..414655- (Pylaiella littoralis U1_48)
ATGACTCGCTCCCTGACTCGCCGACGGTCAAAAGCTACGTTTTATGGTGC
GGTTCCGGCACTTTGGTCAATTATGGTGCTCAGCGCGCTACAGAATGGCT
CCGCATTCCAAGCAAGAAGTTTCAACTTCGTCCGTTGTCAAACAGCAAGT
CCAAGTGGGCTACCGCTCCAGCGTGCACAGCCTGCGAGACTCGCCGCGTC
CTCTGCTGCTGCAGCCGCTGCAACTGCTGCTACCGAGGACGTGAGCAGAG
ATCTACAGAACGACGACAACGCTTTCCGACTAGTCCGGCACCCTGATACT
GTAGAGCTTCAGACCGCCGCGTACAAGTTAGCACCACGACCGAGTCGAGG
AAATGGAAATCAAAATGGAAATAAGGCGGACAGGGATGACGACGCGAAAG
ACGCTGGTGCCGATGTGGAGATCACGCTTGTCTCGATGGTTCACTTGGCG
GATCAGGACTACTACACAGAGATAATGCTCGATGCTTCTTCGTACGATCG
CGTGCTGTTCGAGCTGATTGCTGGATCGGACGTGTCTGGGCTGGATGCTC
GTGGCAATAGAGCTGTCACGGAGTACGTCTACCCCACGAGGGAACAGGAC
GCCTTGGCAAGGAACTACGGTTTGGCGGCGCAGTTGAACTGTCTCAACTA
TTGCTACCTGTGCACCTTGCGCACGGATGGCGGCAGCAGCAGGAGCAGGG
ACGGCAAGAGCACCCCGCGTTGGGTCCTCGCTGACTTGACCCGGGACAAG
ATACGTTCCCTGCAGCAAAGCAAGGGGGAGAAGGAGATAGGTCAACAGGG
GTGGCAAGGCTTCCTGGAAGAGGTGACGAGGGCGTTGGTACTGGGCAGGC
AGGCGGGAGACAATATTTTGCCCAAGTTCTTCCCGCCTTTGGGCAGTTCG
CTCAACAAACCGGCGCTCGTCTTGCGAGCCTTGCTGTGGTTGGCGCCTTG
CCCTGAGGCGGAAATCATGTGCTACGACTGGGCAAGATCTTACCCCAGGG
CCGGCGGACTGTCTGCACTGGCGTCTTCAATCGCGGACAGCGTGCTGTCA
GGAGACTTCTTCACCGCCAAAAAACTAGGCTTCGCTCAGCAGATAGTATC
CGGGCAAGCTGGCGGGGGAAACTGGGGGCAATCGGACACGATTGTCGTGA
AAGCAAGGAACCGAGTGGTGGTGGAGGAGACGGAGCGTGCCCTCGCAGAT
GGGTGCCGTAAAATCATGATTCTCTACGGCGGATTGCATATGCAGGACTT
AAGCGCTCAGCTCTGCAAACAGCTGGACACTACGCGGGAGCCTGCCGGCT
GGAGGACCGCATGGGTGATACCGACGAAATCGAGATCGAAGAAACCAATG
TCAGCAAAACCAATGTCAGCCCGGATGGCGTCACCAGGCGCAGTAGCGGG
AACGCTGGAACAAGGGCAAGGGCAAGGGCAAGGGGGAGTCGGCATGCTGG
GAGGCGAGCCGGGAGACGACGGCATGACTCGGTGGGGGCCGTTGGTAGTT
CCAGCTCTGGCCTACGTGGCGGTCGGAGCGTGGGATTGGACCGACACCGT
CGAGGCTCTAGCAAGATCGCCTCGTTCTCCTGCACAAACCAGAACTGCAT
GCCCAATACGTGGCTTGTGGACGCCAAGCAGGAACCTGGAAAGCGGCAGA
CCACCCTCTGAAGCGTTCGGATCGGCGCTGGTCGTCTGCACGCTGTACGT
GGCTCGCCACGCC
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