mRNA_P-littoralis_Contig181.54.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 324 bits (830), Expect = 1.840e-94 Identity = 198/416 (47.60%), Postives = 253/416 (60.82%), Query Frame = 1
Query: 268 EYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGD----NAICDYPCTGDESETCGGFDAFSLYSMDSMVPAECTKDLVEPYEECE----SSMDCCTEGHECVGLGANECYWQCRPFTSTSFTTMSDDPPSPMTAATLAPYAAXXXXXXXXXXXXXXXXXXXXXXXXXIAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTPVSECKVVIIEAESLTLKGAWSKKADDAASGGEYIVWEGLGSEQNNRAPEETDTIVATIQIPAAGTYSFKWAMRQPSGVASDKGNDSWLYFPDADRFGPADSSHNYGEFVKVYGNAPDGTFEYQGTAEEENGDKTQMAIEFGMAGGYTMEIAGRSHGHEIDQIIMFDHDLHLNDALA--GC 1485
EY+GCF D+KEDR+LG + S MTTEVC HC + GA FMATQFG ECWC L YERH +A+CD C GD+++ CGGF++F LY + + C+ VE YE+C + CC +G++C + + CY QCRP +++ +P +P +T P A XXXXXXXXXXXXXXXXXXXXX++ P S C VV +EAE L + G W D ASGG+YI WEGL QNN P + D + A+IQ+P AGTYSFKW MRQP GV SDKGND+WL FPDA R+GPA + +YG F+KVYG A +G FEY GT E+ +G TQ+A+EF AG Y MEI+GRSHG +IDQI++F DL +++A+A GC
Sbjct: 397 EYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKLQTTSTVLCSGTPVEAYEQCGGKDWTGSTCCMDGYDCTQMVEDGCYAQCRP-------SVTVEPITPSPVSTTRPPVALSTSXXXXXXXXXXXXXXXXXXXXXVS-----------------------------------EPTSGCMVVRMEAEDLPVLGDWRVVNDADASGGKYITWEGLSEGQNNGDPADGDIMSASIQVPTAGTYSFKWLMRQPDGVESDKGNDAWLNFPDAKRYGPAGTQESYGTFIKVYGRATNGDFEYSGTGEDSHGH-TQIAVEFEEAGEYAMEISGRSHGLQIDQILVFGEDLSVDEAVANTGC 769
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 318 bits (816), Expect = 3.000e-91 Identity = 246/475 (51.79%), Postives = 289/475 (60.84%), Query Frame = 1
Query: 265 YEYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLYSM--------------------------DSMVPAECTKDLVEPY-EECESSMDCCTEGHEC-VGLGANECYWQCRPFTSTSFTTMSDDPPSPM-------------TAATLAP---------------------------YAAXXXXXXXXXXXXXXXXXXXXXXXXXIAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTPVSECKVVIIEAESLTLKGAWSKKADDAASGGEYIVWEGLGSEQNNRAPEETDTIVATIQIPAAGTYSFKWAMRQPSGVASDKGNDSWLYFPDADRFGPADSSHNYGEFVKVYGNAPDGTFEYQGTAEEENGDKTQMAIEFGMAGGYTMEIAGRSHGHEIDQIIMFDHDLHLNDALAGC 1485
Y Y+GCF DSKEDRV SS MTT VC ++C DR AT+MATQ+G ECWC E++Y+RH D +CD+ C GD ++ CGGFDAF LY + + + + T+ + Y EE ++ G EC G+ +E ++ R + S DP A +AP XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXV APTP ++C VVIIEAE L + G W D+AASGG YI WEGL QNN P + D I ++QIP AGTYSFKWAMRQP GV SDK NDSWL FPDADRFGPA +S +YG FVKVYGNA DG F+YQGTAEEENGD TQ+AIEF AG Y MEI GRSHGH+IDQI++F L ++DA+AGC
Sbjct: 433 YSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDG-VCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYK-RHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 905
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 306 bits (784), Expect = 5.500e-91 Identity = 227/483 (47.00%), Postives = 269/483 (55.69%), Query Frame = 1
Query: 253 SEGKYEYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLYSM--------------------------DSMVPAECTKDLVEPY-EECESSMDCCTEGHEC-VGLGANECYWQCRPFTSTSFTTMSDDPP-----------------SPMTAATLAPYA------------AXXXXXXXXXXXXXXXXXXXXXXXXXIAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTP--------------VSECKVVIIEAESLTLKGAWSKKADDAASGGEYIVWEGLGSEQNNRAPEETDTIVATIQIPAAGTYSFKWAMRQPSGVASDKGNDSWLYFPDADRFGPADSSHNYGEFVKVYGNAPDGTFEYQGTAEEENGDKTQMAIEFGMAGGYTMEIAGRSHGHEIDQIIMFDHDLHL-NDALAGC 1485
+E Y Y+GCF DSK+DRV S MTT VC ++C DR ATFMATQFG ECWC E++Y+RH D +CD C G+ ++ CGGFDAF LY + + + + T+ + Y EE ++ G EC G+ +E ++ R + S DP P A TL P A XXXXXXX AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++C VVIIEAE L + G W D+AASGG YI WEGL QNNR P + D I ++QIP AGTYSFKWAMRQP GV SDK NDSWL FPDADRFGPAD+S +YG FVKVYGNA DG F+YQGTAE+E+G TQ+AIEF AG Y MEI GRSHGH+IDQI++F H DA+AGC
Sbjct: 7 AEEGYSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDG-VCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYK-RHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAEPVAPTPGPXXXXXXXVSALTPEPVAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSYGTFVKVYGNAADGVFKYQGTAEDEDGAHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGGSFHTAEDAVAGC 487
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.920e-27 Identity = 62/122 (50.82%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 232 STAAPLNSEGKYEYLGCFKDSKEDRVLGRQD-ISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLYSMDSMVPAECTKDLVEPYEE 594
S + P G YE++GCF+DS+ DRVL R IS MT E+CY+ C +GA +MATQ+G ECWC L Y+RHGD +CDYPC GDESETCGG +F+LY + S PA ++ V Y +
Sbjct: 1134 SESEPGGRPGAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRL-SWAPAPEDEEYVGCYTD 1254
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: A0A6H5KHF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF5_9PHAE) HSP 1 Score: 118 bits (296), Expect = 6.660e-27 Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 1
Query: 265 YEYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLY----SMDSMVPA--------ECTKDL----VEPYEECESS----MDCCTEGHECV 639
YEY+GC+ D ++DRVLG + S +MT + CY++C + GA +MATQ+ EC+C +L YERHG A+C+ C GDE ETCGG +AF LY SM+S PA E T L E + +C+ CC EG++CV
Sbjct: 21 YEYVGCYTDRQDDRVLGDKLDSDLMTADFCYEYCSEMGAAYMATQYAFECFCSADEDLDYERHG-TAMCNMGCLGDEGETCGGENAFDLYKIMPSMNSPTPATPFSEPEPEPTTPLSDGCAEAWGQCDGGNWEGSTCCVEGYKCV 164
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.840e-26 Identity = 67/158 (42.41%), Postives = 89/158 (56.33%), Query Frame = 1
Query: 265 YEYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLY----SMDSMVPAE------------CTKDLVEPYEECESS----MDCCTEGHECVGLGANECYWQCRP 678
YEY+GC+ D ++DR+LG + S +MT + CY++C + GA +MATQ+ EC+C +L YERHG A+CD C GDE ETCGG +AF LY SMD PA + E + +C CC EG+ECV N+ Y QCRP
Sbjct: 334 YEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHG-TAMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVSDGCAEAWGQCGGGNWEGSTCCMEGYECVAN--NDWYSQCRP 488
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.160e-24 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 262 KYEYLGCFKDSKEDRVLGRQDISSV-MTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLYSM 540
KYEY+GCF DS+EDR+L S M+TE CY+HC + GA +MATQ+ EC+C + +L+Y+RHG A CD CTG E ETCGG AF LY +
Sbjct: 55 KYEYIGCFTDSQEDRILDDMLTSRTDMSTEKCYEHCMEMGAEYMATQWAQECFCSNNKDLEYDRHGSGAECDMSCTGVEGETCGGNHAFDLYKL 148
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D8LTU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU8_ECTSI) HSP 1 Score: 120 bits (302), Expect = 3.030e-24 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 265 YEYLGCFKDSKEDRVLGRQDISSV-MTTEVCYQHCFDRGATFMATQFGSECWC--EDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLYSM 540
Y Y+GCFKDS++DR+LG Q +S MTTE CY +C + ATFMATQ+ ECWC E ++ Y RHG+ A C+Y C GDE E+CGGFDAF LY +
Sbjct: 560 YTYVGCFKDSQQDRILGDQLTNSQEMTTEFCYDYCITKDATFMATQYAIECWCTSEPEDQVDYARHGEGAQCNYDCAGDEDESCGGFDAFDLYRI 654
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 118 bits (295), Expect = 8.400e-24 Identity = 50/95 (52.63%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 256 EGKYEYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERHGDNAICDYPCTGDESETCGGFDAFSLYSM 540
E Y Y+GCF D+K DRV S MTT VC ++C +R AT+MATQ+G ECWC E +Y+RH D +CD+ C GDE++ CGGFDAF LY +
Sbjct: 397 EASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDG-VCDHACGGDEADYCGGFDAFDLYKI 490
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 117 bits (292), Expect = 1.780e-23 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 211 RHSRKLTSTAAPLNSEGKYEYLGCFKDSKEDRVLGRQDISSVMTTEVCYQHCFDRGATFMATQFGSECWCEDTVELKYERH-----GDNAICDYPCTGDESETCGGFDAFSLYSMDSMVPAE 561
R RK + +YE++GCF D+K DRVLG S +MT+ +C +HCF R AT+MA Q+G ECWC EL Y RH GD +CD C G ++ETCGG AF LY +D +P++
Sbjct: 296 RPCRKRNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSD 417 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig181.54.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig181.54.4 >prot_P-littoralis_Contig181.54.4 ID=prot_P-littoralis_Contig181.54.4|Name=mRNA_P-littoralis_Contig181.54.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=457bp MLGSLFDTASAAFAATSLLALQANALSPVSLRHSRKLTSTAAPLNSEGKYback to top mRNA from alignment at P-littoralis_Contig181:301513..311523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig181.54.4 ID=mRNA_P-littoralis_Contig181.54.4|Name=mRNA_P-littoralis_Contig181.54.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=10011bp|location=Sequence derived from alignment at P-littoralis_Contig181:301513..311523- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig181:301513..311523- >mRNA_P-littoralis_Contig181.54.4 ID=mRNA_P-littoralis_Contig181.54.4|Name=mRNA_P-littoralis_Contig181.54.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1371bp|location=Sequence derived from alignment at P-littoralis_Contig181:301513..311523- (Pylaiella littoralis U1_48)back to top |