mRNA_P-littoralis_Contig181.52.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI) HSP 1 Score: 1411 bits (3652), Expect = 0.000e+0 Identity = 994/1968 (50.51%), Postives = 1131/1968 (57.47%), Query Frame = 2
Query: 3572 LFVSGMMGVKRHCLGTLRSRRESRTPASFATVTALPPTAMDDPTPLLPSSQYEVRLNVSRGLGLSINITGNDVRVKGFSPVQGGEIGPAQACGDIQVGDALVCVNHTQLRLLDHETVVRVLKSLLNTAGSQLLLLRFAHAENSPRLRGAPPXXXXXXXXXXXXLXXXKTPKPKRQSSLGTPKYEKRVTVPPKRAESANTAEEGKNVFRPQSWHGSRAPPSKSEGXXXXXXXXXXXXXXXASPPHVSWPPRARSHSL-EDDLPNEAGL--KTGGREGAGEKGR--GWTVADGVVGMRPKGPQGGELWGERETGLAGGDGGSRHVYLGDMGHARAQRTLQSIAEDVQVLACLLGPPPLPKELYRGRRXXXXXXXXSPTLIPPAAFAGDGGKGEEVEAE---------GGRIDLLSCQEVVRGELERLDGELDRQAETLARRYRRSSTRRLVAKMLHKSARSSASASLFDDSPSPPNRGGXXXXXXXXXE------AGSTDWPAWDEQDDGYRVALGGLSDDGDLTDSGDSMSPAAVAXXXXXXXXXXXXXXXIEGGES--SLDDEE-----------------GACDIFLEAVSTGGLQEELLTNPDVEVLGVDPPRPLPPAAYDLQTALESVQHFATQTLAGVVQAKA---------------------------------AAKESREAAAAAGSLEGWEKAWPPKELTKELGLVTARQMAHVMRCDAEPLIQIWMRCFTPVNVKHRSKLWGGLAPPSPLGRDR--DMGMWHRQLVCGLLTLFTQVHMSWHFLARPPNDPSAVGLLSLRLETTWFSTLEDAGDGNAGQPGAGDTGA----ESPTSQGAVSAAGSLEDWDQASGGR--RGPLQWDEERAVMFIQDHGAYLEADAVAAAASCREMEWALQEVLRLAEQCDHYKSNERLLHQLLRVPRTPSM------------------------RSPANNSXXXXXXXXDTLTPDPWTPTKLSRRSPAAKSRTFSSSSSFPLSGGAVSAASATA-SATKDVGG-GGTSTFETIPGPAEEGAVRKALGLR-----PACSADTGDSHFRESDRRESGDGLSGLGREGRGSGRL--DQGSRALGGAPLCLLLSNLGELFRWDVAAAADICADAFPGVRPWNVHIALHQEQEKGWAASAPTTPVPQXXXXXXXXARKHPYPAG----DDNSGTRNDATFHAYLWAMMQTRPKECRRDWKVIRRCLQLSLRLSTKLRSLPPDHALQGFCKAATRTYSKRHRRTAGPEPSCSGTGNPE-AFLAGTGSQVSRPRDDHGWPSAGGGSGGSKGGRC----LRLAVDESGGIRDDSVWRRYSDVVQEVVSLWCQDVDALDLDPLWLLPKLRTHENWSVAFKVCATVIYSWEEE----QQVTTSYGPPDNSTA--ERLERHHDHGSSGRGLSSVLAVFDALADACFTTFDDGDTKTLTAALGAVWAADGSLRRVSIRKTPPCVEGDAEAS-SPGLE----SFSFSSSPTTGSPAPFEAGHADGDALGSSEAGQQSPTGPLSSGGRXXXXXXXTGQERGCDTVGEWVEDSRIVGVVRNLTQRCRGLPARAEETGNGCVGG---DGGGDRWVPSTAEGAG-ASGPSEDSRGGAARTPVGAPSFLEL----------AEAVLDAVGPEATGDILAVCPQLLENMPQKFFRNLADRQAALRQQQALEATLLRQATAAIWSARGRK------SGTESDDARTSSLGPRLAWLACEELTSFFQHNAYTTRRDXXXXXXXXXXRGAQGS-GAPAVGSALGLL---QSLMPPHPGMAGVGPPDSRESRGRGVSGAGAGVGRDDNGFER-------------LIKQAVARMDLNLVLPGGSHRGTAFDPTSPCGFCGLALECDTIADGRFGCFAGRTAMVSTAAAAPTGQGTELVVLACGHGFHARCLAGGSSHRRGGVTKSAGWGGVESMPLL-CPQCV 8962
L VSGMMGVKR C+GTLRSRRESR P TVT LP +AMDDP P +P SQYEVRLNVSRGLGLS+NITGNDVRVKGFS VQGG+IGPAQACGDIQVGDALV VNH QL LL+HE VVRVL+ LL T GSQ+LLLRFA+AE+SPRL A XXXXXXXX KT P R S++ P+ E RV+ + + + FR +SWHGS PP EG SP + P RS SL E P AG K G E ++G GWTV GMRP+G + GELWGE E GLAGGDGGSRH+YLGDMGHAR QRTLQ+IAEDVQ PPPLP+ELYRGR XXXXXXXX GG I+L+SCQ VV+ E+ RL+GEL+RQ LARR RRSS R LVAKMLHK SA DDSPSP RG AG T +W E++ G + G DGDLTDS D +S + GE S+DD GACDIFLEAVST GLQ+ELL N DVEVLGVDPPRPLP AAYDLQTALESVQHFATQTLAGVVQA A AAKE+RE AAG +E WE AWPP+ELT LGLVTARQMAH MRCD EPLIQIWMRCFTPV+ KHR+KLWGGLAPP P DR + G WHRQLVCGLLTL+ QVHMSW FLARP +DP AVGL SLRLETTWF T ED G ESP GA SAAGS WD+A GG RGPLQWDEE+AV FIQD+GAYLE DAVAAAASCREMEWAL EVLRLAEQC+ YKS ER+LHQLLR PRTPSM RSPAN+ T TP WTPT +S A S + L A+SA S KD G GGT GP EE AVRKALGL PA + ++H R ++ E G G+ G E GSGRL +A GGAPLCLLL+NL ELFRWDVAAAA++CADAFPGVRPWNVH ALH++Q+K W S P TPV A+ P AG D + GTR DA FHAYLWA+++ P ECR DWKVI+RCLQLSLRLSTKLRSLP DH L FCKAATR + KR RR P +G +PE AF Q R W AGGGSGG G R LRL V++SG D S WRRYSDVV+E+VS WC+ DA LDPLWLLPKLR H+NW VAF++C + SWEE+ Q++T ++TA + LE HD+ S L S L VFD LADACF TF+DGDT+TL AALG WAADG+LRRVS+R PP + GD SPG + S S S G + + A A G E G QSP G S WVE+SR+V VVR L +RC G P A++ G G DG GD + ++ G G AS SED GG+ AEAVLD VGPEATGD+LA CP LLE +P KFF++LADRQAAL QQ+ALEA LL QATAAIW++RGR+ +G D + S LGPRLAWLACEELTSFFQ NA + G GS G+ GS GL ++ M AG+G G +S G G +D+G R L+ +DLNLVLPG +HRG AFDP SPCGFCGLAL G C G G+G ELV+ ACG G H+RCLA G S W SM + CPQC
Sbjct: 2 LLVSGMMGVKRQCMGTLRSRRESRIPTHLVTVTELPVSAMDDPNPFVPPSQYEVRLNVSRGLGLSLNITGNDVRVKGFSTVQGGDIGPAQACGDIQVGDALVRVNHEQLNLLNHENVVRVLRGLLRTTGSQVLLLRFAYAEDSPRLLRA----TTXXXXXXXXXLPPKTRVP-RPSTMENPRSEPRVS---------HGGLDTEEAFRSESWHGSSKPPRAREGQGQGREMARS-----VSPHRRTGPAVLRSQSLGEGGPPTVAGFARKGSGAEAGHKEGEWEGWTVD----GMRPRGKRRGELWGEPELGLAGGDGGSRHIYLGDMGHARVQRTLQAIAEDVQP------PPPLPRELYRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVINLVSCQGVVQAEVSRLEGELERQRARLARRNRRSSARSLVAKMLHKCG---PSALFSDDSPSPTARGSGRGPAAGAFSRRRSSLAGGTG-ASWREENSGGGL---GRPSDGDLTDSSDDISGTVARRATAAAARVSGEASGVGQGEDGFSIDDXXXXXXXXXXXXXXXXXXXGACDIFLEAVSTAGLQDELLCNRDVEVLGVDPPRPLPAAAYDLQTALESVQHFATQTLAGVVQAAAVRGSDLYDNDYDPLSGARSPRHLAGGGRAGKGSAAKEAREGGVAAGLVEEWEAAWPPRELTAALGLVTARQMAHAMRCDTEPLIQIWMRCFTPVDAKHRTKLWGGLAPP-PSVNDRFLEAGRWHRQLVCGLLTLYAQVHMSWPFLARPKDDPDAVGLRSLRLETTWFGTQEDVGXXXXXXXXXXXXXXXXEEESPI--GAGSAAGS---WDEAGGGAVGRGPLQWDEEKAVGFIQDYGAYLEGDAVAAAASCREMEWALDEVLRLAEQCEDYKSKERVLHQLLRGPRTPSMTTVSGRSSPTVWHQRSAMFGTTPARSPANS-----ISTTGTRTPGNWTPTIMSPSRAAFPS--------YQLPSEAMSAGGXXXXSGWKDGDGFGGTLDAALSSGPMEEDAVRKALGLLVPPADPAGNVVEDENHRRHANA-EHGQGVGFSGHEAGGSGRLLSQTTKQAPGGAPLCLLLNNLRELFRWDVAAAAEMCADAFPGVRPWNVHHALHRDQDKPWTTSEPVTPV--GGGTARYQAQAPPAGAGVAGGDGDGGTRTDAAFHAYLWAVLRKHPGECRGDWKVIQRCLQLSLRLSTKLRSLPSDHPLHSFCKAATRNF-KRRRRADDPATRETGVRHPEGAFSTDGRGQFHNSRR---W-RAGGGSGGGSGMRTPTGDLRLGVEDSGETGDGSAWRRYSDVVEELVSQWCKHGDAFGLDPLWLLPKLRAHKNWPVAFRICGAIACSWEEQGERGHQMSTGVISHCHATAAADGLEEGHDYDS----LVSTLPVFDTLADACFATFNDGDTETLAAALGTTWAADGALRRVSLRARPPPLRGDDGGGVSPGQQAVAASLSVEESQVLGQVSAYGNVAAAAAAAGP-EFGHQSPIGMQGSSSARAGACAQEXXXXXXXXXXGWVEESRMVDVVRGLARRCSGQPVGADDAGGSNNDGGDADGRGDADLGCSSTGGGDASMASEDPEGGSXXXXXXXXXXXXXXXXXXXXXXXAEAVLDGVGPEATGDVLAACPHLLEGIPPKFFQDLADRQAALSQQRALEAALLHQATAAIWASRGRRRATVTGAGDTGDSSDASPLGPRLAWLACEELTSFFQDNANSASASPNARLLG----GEPGSAGSSCAGSPPGLQHHHRATMEVF--AAGIG--------GDNLSRVFNGSGGNDDGLFRSLRRKEPGSVSQGLVASMGVNLDLNLVLPGNAHRGAAFDPASPCGFCGLALS-----GGGVACDGG----------GEEGEG-ELVLCACGRGIHSRCLAAAGWE---GGWDSGRWYEAGSMLVFPCPQCA 1868
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE) HSP 1 Score: 988 bits (2555), Expect = 0.000e+0 Identity = 674/1368 (49.27%), Postives = 780/1368 (57.02%), Query Frame = 2
Query: 5276 VLGVDPPRPLPPAAYDLQTALESVQHFATQTLAGVVQAKAA---------------------------------AKESREAAAAAGSLEGWEKAWPPKELTKELGLVTARQMAHVMRCDAEPLIQIWMRCFTPVNVKHRSKLWGGLAP-PSPLGRDRDMGMWHRQLVCGLLTLFTQVHMSWHFLARPPNDPSAVGLLSLRLETTWFSTLEDAGDGNA------GQPGAGDTGAESPTSQGAVSAAGSLEDWDQASGGR--RGPLQWDEERAVMFIQDHGAYLEADAVAAAASCREMEWALQEVLRLAEQCDHYKSNERLLHQLLRVPRTPSM------------------------RSPANNSXXXXXXXXDTLTPDPWTPTKLSRRSPAAKSRTFSSSSSFPLSGGAVSAAS-ATASATKDVGG-GGTSTFETIPGPAEEGAVRKALGLR-----PACSADTGDSHFRESDRRESGDGLSGLGREGRGSGRL--DQGSRALGGAPLCLLLSNLGELFRWDVAAAADICADAFPGVRPWNVHIALHQEQEKGWAASAPTTPVPQXXXXXXXXARKHPYPAG------DDNSGTRNDATFHAYLWAMMQTRPKECRRDWKVIRRCLQLSLRLSTKLRSLPPDHALQGFCKAATRTYSKRHRRTAGPEPSCSGTGNPEAFLAGTG-SQVSRPRDDHGWPSAGGGSGGSKGGRC----LRLAVDESGGIRDDSVWRRYSDVVQEVVSLWCQDVDALDLDPLWLLPKLRTHENWSVAFKVCATVIYSWEEEQQ---------VTTSYGPPDNSTAERLERHHDHGSSGRGLSSVLAVFDALADACFTTFDDGDTKTLTAALGAVWAADGSLRRVSIRKTPPCVEGD--------AEASSPGLESFSFSSSPTTGSPAPFEAGHADGDALGSSEAGQQSPTGPLSSGGRXXXXXXXTGQERGCDTVGEWVEDSRIVGVVRNLTQRCRGLPARAEETGNGCVGG---DGGGDRWVP-STAEGAGASGPSEDSRGGAARTPVGAPSFLEL----------AEAVLDAVGPEATGDILAVCPQLLENMPQKFFRNLADRQAALRQQQALEATLLRQATAAIWSARGRK------SGTESDDARTSSLGPRLAWLACEELTSFFQHNAYTTRRDXXXXXXXXXXRGAQGSGAPAVGSALGLLQSLMPPHPGM--AGVGPPDSRESRGRGVSGAGAGVGRDDNGFERLIKQA---------VARM----DLNLVLPGGSHRGTAFDPTSPCGFCGLALECDTIADGRFGCFAGRTAMVSTAAAAPTGQGTELVVLACGHGFHARCLAGGSSHRRGGVTKSAGWGGVESMPLL-CPQCV 8962
VLGVDPPRPLP AAYDLQTALESVQHFATQTLAGVVQA A AKE+R+ AAG +EGWE AWPP+ELT LGLVTARQMAH MRCDAEPLIQIWMRCFTPV+ KHR+KLWGGLAP PS + G WHRQLVCGLLTL+ QVHMSW FLARP +DP AVGL SLRLETTWF T ED G G G G+ AE + GA S AGS+ DWD+A GG RGPLQWDEE+AV FIQD+GAYLEADAVAAAASCREMEWAL EVLRLAEQC+ YKS ER+LHQLLR PRTPS+ RSPAN+ T TP WTPT +S SR S P+ A+SAA A S KD G GGT GP EE AVRKALGL PA + ++H R ++ E G G+ G E GSGRL S+A GGAPLCLLL+NLGELFRWDVAAAA++CADAFPGVRPWNVH ALH++Q+K W S P TPV + H PAG D + GTR DA FHAYLWA+++ P ECR DWKVI+RCLQLSLRLSTKLRSLP DH L FCK ATR KR +R P +G +PE + G Q R W AGGGSGG G R LRL V++SG D S WRRYSDVV+EVVS WC+ DA LDPLWLLPKLR H+NW VAF++C + SWEE+++ ++ Y + A+ LE HD+GS L S L VFD LADACF TF+DGDT+TL AALGA WAADG+LRRVS+R PP + GD +A + L +S TG+ + A A G E G QS TG S G WVE+SR+V VVR L +RC G P A++ G G DG GD + S+ G AS SED GG+ AEAVLDAVGPEATGD+LA CP LLE +P K AAL QQ+ALEA LL QATAAIW++RGR+ +G + + S LGPRLAWLACEELTSFFQ NA + G GS P+ + LQ + AGVG G +S +G G +D+G R +++ VA M DLNLVLPG +HRG AF+P SPCGFCGLAL G C G G+G +LV+ ACG G H+RCLA S W SM +L CPQC
Sbjct: 35 VLGVDPPRPLPAAAYDLQTALESVQHFATQTLAGVVQAAAVRGSDLYDNDYDSLSGARSPRHLAGGGRAGKGSGAKEARDGGVAAGLVEGWEAAWPPRELTAALGLVTARQMAHAMRCDAEPLIQIWMRCFTPVDAKHRTKLWGGLAPAPSVNDPFLEAGRWHRQLVCGLLTLYAQVHMSWPFLARPKDDPDAVGLRSLRLETTWFGTQEDVGAGGXXXXXXXGIAVPGNAAAEEESPIGAGSPAGSVGDWDEAGGGAGGRGPLQWDEEKAVGFIQDYGAYLEADAVAAAASCREMEWALDEVLRLAEQCEDYKSKERVLHQLLRGPRTPSVTTVSGRSSPRVWHQRAGMLGTTPARSPANS-----ISTTGTRTPGNWTPTIMS------PSRAGFPSYQLPIE--AMSAAGGAGGSGWKDGDGFGGTLDAALSSGPMEEDAVRKALGLLVPPADPAGNVVEDENHRRHANE-EHGQGVGFSGHEAGGSGRLLGQTTSQAPGGAPLCLLLNNLGELFRWDVAAAAEMCADAFPGVRPWNVHHALHRDQDKPWTTSEPVTPV----EGGSARYQTHAPPAGAGVARGDGDGGTRTDAAFHAYLWAVLRKHPGECRGDWKVIQRCLQLSLRLSTKLRSLPSDHPLHNFCKVATRNL-KRRQRADDPATREAGVRHPEGGFSTDGRGQFHNSRR---W-RAGGGSGGGSGMRTPTGDLRLGVEDSGETDDGSAWRRYSDVVEEVVSQWCKHGDAFGLDPLWLLPKLRAHKNWPVAFRICGAITCSWEEQEEEGHQMNTGVISHCYA---TAAADGLEEGHDYGS----LGSTLPVFDTLADACFATFNDGDTETLAAALGATWAADGALRRVSLRARPPSLRGDDGGRLSPRQQAVASSLSGGKIQASGQTGAYSNVTAA-----AGGGPELGHQSLTGMQGSSSAGVGASAEXXXXXXXXXXG-WVEESRMVDVVRGLARRCSGQPVGADDAGGSNNDGGDADGRGDANLGCSSTGGVDASMTSEDPEGGSXXXXXXXXXXXXXXXXXXXXXXXAEAVLDAVGPEATGDVLAACPHLLEGIPPK---------AALSQQRALEAALLHQATAAIWASRGRRRTTATGAGNKGGSSDASPLGPRLAWLACEELTSFFQDNANSASASPNARLLG----GEPGSAGPSCAESPPGLQHHHRATTDVFAAGVG--------GDNLSRVFSGFGGNDDGLFRSLRRKEPGSVSQGLVATMGVNLDLNLVLPGNAHRGAAFNPASPCGFCGLALS-----GGAVACDGGGE-----------GEG-KLVLCACGRGIHSRCLAAAG-------WDSGRWYEAGSMLVLPCPQCA 1321
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Match: D8LF17_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF17_ECTSI) HSP 1 Score: 588 bits (1515), Expect = 4.760e-180 Identity = 423/913 (46.33%), Postives = 498/913 (54.55%), Query Frame = 2
Query: 71 MKERLLFHLRLGDSSSPQQLSRRKSPTGVVEIASTPAEGSAETPSAAAAAVAVPAGLQQQGTVDREPP-LVCTCVHSSLSSSAVAVGFERGVVHVYHREQGLGRYGCREEKRWARLVLYPTRALGSGRTSPIESPLSA-LPPDITCVAIGSGGDKLAVGTSDGFVFVTQAPPXXXXXXXXXXXXXXXWSRGTGFHHKSHNGKRINCLLWDDSGDRLFSVCEGGTVVLARNLRPRRGGPAADGVGITGVMQLLGVHQPDEASRSE-PVGPQAFIVAQAGSPGISLDLGRTVAVLPASTRGYVQCDVLLVMTRKRAVLLYFAVGEDISVVAPHKTCVDLNVVEQPIPADSRRPQRHGTTGSTTDFNPFPTPPAQTDLGACLWGPAPRPKAGGNTPSAADRGA-----SRTSGTRGERTPEKRGN----PADDRTAAPVPRQVLFAYVAQPGGRLWRVGLFDGEVESMHRPTIDIDQESEENGSGAACD--LELGALRAADLGDARVLLCWRRHRGLSSENGGEFALLDPNTHRFVASCSSPAPSIVDVSGFALSPPCPKPGGGERVPVGSAAPTVRQRSEVLGGGVRVLHGGGSAKVTMLYHRGKGXXXXXXXXXXXXXXXXXXXXGRSDTLPAETAAVRRIQGAWRARRDSGTGN----------AAGLFPPSAASQVPALQLRMPGDFPSRG-GVARSAVG------TAQDGAGGKNTXXXXXXXXKRAGRNDGPARDPVR------DEPGRGGKV--------------------GTRSKPKLVFFRESV-----ASRALRLSAPSRESDASSGQTEGGDD---NPRPPTNIREINGAGGRQVKKGRVSGXXXXXXXXXESDGASEFRRAAADLLVVRELWPALCRSRSQEAFPSRPDSLPPFDGSAPASLP 2614
MKER LFHLRLGDSS+P L+RRKS D PP LV TC+HSS+SS AVAVGFERGVVHVY+R+ EE+RW R V+YPTRALGSG SPIESP +A +PPDITCVAI GG KLAVGTSDGFVFVTQAPP W+RG+GFHHKSH GKRINCLLW +SGD+L+SVCEGGTVVLARNLRPRRG PAA GITGVMQ LGVHQPD++++++ P PQA +V GSPG+SLDLGRT A LP +T+G++ CDVLLVMTRK+AVL YFAVGED+S+VAPHKT VDLNVV+ AD+ +P + G+ ++TD G CLWGPA P GG +R + G RTPE+R + PA AA PR VLFAYVAQPGGRLWRVGL DGEVES HRP + +D E G G + +ELG + A D+GDAR LLCWR G +S+ GGEFALLDPNTH FVA+C + VDVSGF LSP GGG + ++RQR EVLGGGVRVLHGG AKVTMLYH +G G L AE AA R +Q AWRA R G P A++ P LQL MPGDFP RG G A SA + +D A G R PA R D GG V G RS K R+S+ A RAL+LS+ +R++ + + G D + R +G G G SG ESDG + + ++R WP L S F S P PP G APA P
Sbjct: 1 MKERPLFHLRLGDSSTP--LARRKSLLDTXXXXXXXXXX-----------XXXXXXXXXXXXXDERPPHLVSTCLHSSVSS-AVAVGFERGVVHVYYRQHEDRVRRSSEEERWKRTVIYPTRALGSGVASPIESPAAAAVPPDITCVAIAPGGGKLAVGTSDGFVFVTQAPPPPTGGSPGTG-----WARGSGFHHKSHRGKRINCLLWANSGDQLYSVCEGGTVVLARNLRPRRGAPAAGPAGITGVMQFLGVHQPDDSTKADTPASPQAIVVGHTGSPGVSLDLGRTRASLPGATKGFLACDVLLVMTRKQAVLFYFAVGEDVSIVAPHKTSVDLNVVDHTT-ADTGQP----SGGNXXXXXXXXXXXSRTDFGGCLWGPAQMPGVGGXXXXXXXXXXXXXXXARGRSSAGMRTPERRESCEALPAAAAVAA-APRAVLFAYVAQPGGRLWRVGLSDGEVESTHRP-LGVD----EGGDGLPVESGVELGEMWAVDVGDARALLCWRS--GFTSKKGGEFALLDPNTHSFVAACPGMS-GTVDVSGFVLSPLPQSAGGG-------SLQSIRQRLEVLGGGVRVLHGGDLAKVTMLYHNAEGEAWSTSSSEAIE--------GWGAALSAE-AAARTVQRAWRATRKGXXXXXXXXXXXXXXVEGGDTPPTATRDPPLQLLMPGDFPLRGRGAAVSAAAPPSSLPSVRDVAAGYPDSSAAAGLQLRDQAETAPAAAAARGHRNREDRDDSGGWVPESLPSGNGDLGSGSSRRRRGARSGSKNFSVRDSIEALDAADRALQLSSHARQASSPTSGDRGEDTYWPTDESSSRSRRTDGGGVGXXSSGTPSGS--------ESDGGAN-AMCRGSVALLRAAWPVLPCPLSLVRF-SLPPGSPPVRG-APACFP 853
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Match: A0A6H5JMH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH3_9PHAE) HSP 1 Score: 230 bits (586), Expect = 2.270e-63 Identity = 169/346 (48.84%), Postives = 189/346 (54.62%), Query Frame = 2
Query: 3572 LFVSGMMGVKRHCLGTLRSRRESRTPASFATVTALPPTAMDDPTPLLPSSQYEVRLNVSRGLGLSINITGNDVRVKGFSPVQGGEIGPAQACGDIQVGDALVCVNHTQLRLLDHETVVRVLKSLLNTAGSQLLLLRFAHAENSPRLRGAPPXXXXXXXXXXXXLXXXKTPKPKRQSSLGTPKYEKRVTVPPKRAESANTAEEGKNVFRPQSWHGSRAPPSKSEGXXXXXXXXXXXXXXXASPPHVSWPPRARSHSL-EDDLPNEAGL--KTGGREGAGEKGR--GWTVADGVVGMRPKGPQGGELWGERETGLAGGDGGSRHVYLGDMGHARAQRTLQSIAEDVQV 4594
L VSGMMGVKR CLGTLRSRRESR PA ATVT LP +AMDDP P +P SQYEV GDALV VNH QL LL+HE VVRVL+ LL T GSQ+LLLRFA+AE+SPRL A XXXX KTP P R S++ P+ E RV+ E A FR +SWHGSR PP +G SP + P RS SL E P AGL K G E ++G GW V GMRP+G + G LWGE E GLAGGDGGSRH+YLGDMGHAR QRTLQ+IAEDVQV
Sbjct: 2 LLVSGMMGVKRQCLGTLRSRRESRIPAHLATVTELPVSAMDDPNPFVPPSQYEV-------------------------------------------GDALVRVNHEQLNLLNHENVVRVLRGLLRTTGSQVLLLRFAYAEDSPRLLRA------TTSPXXXXXLPPKTPGP-RPSTMENPQSEPRVSQSDLDTEEA---------FRSESWHGSRKPPRARKGQGQGREMARS-----VSPHRRTGPALLRSQSLGEGGPPAVAGLAHKGSGAEAGDKEGEREGWAVD----GMRPRGKRRGVLWGEPEMGLAGGDGGSRHIYLGDMGHARVQRTLQAIAEDVQV 279
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Match: A0A4D9D6T8_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6T8_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.670e-12 Identity = 79/286 (27.62%), Postives = 119/286 (41.61%), Query Frame = 2
Query: 5315 AYDLQTALESVQHFATQTLAGVVQAKAAAKESREAAAAAGSLEGWEKAWPPKELTKELGLVTARQMAHVMRCDAEPLIQIWMRCFTPVNVKHRSKLWGGLAPPSPLGR-----DRDMGMWHRQLVCGLLTLFTQVHMSWHFLARPPN--------DPSAVGLLSLRLETTWFSTLEDAGDGNAGQPGAGDTGAESPTSQGAVSAAGSLEDWDQASGGRRG---PLQWDEERAVMFIQDHGAYLEADAVAAAASCREMEWALQEVLR-LAEQCDHYKSNERLLHQLL 6121
+ DL+ A+E + H TLA +V + + AG K WPP +LT G+ A Q AH + +E ++Q W+RCF P+ R +W + S L + D +M H L C L TL+ Q+H W L + + D + G +RL+ + D G S G + G RRG P QW EE A+ F++++GAY+ + A R E AL ++R L Q ++ E+ L Q L
Sbjct: 1080 SQDLEAAMEVLTHVLEATLAEMVGCAGDKMAAEDFPFLAGG-----KPWPPVQLTHVTGMAIAVQQAHAILSSSETMLQEWLRCFQPLPPSQRHMIWD--SSDSFLSQHIHPDDAEMIRQHHLLTCELATLYFQMHTVWPLLEKSVSTKEQSSEKDDNRDGTEEVRLDIAGGCAVLDGGG-------------RFDASLGILHV-----------GSRRGEGMPTQWQEEEALAFLEEYGAYVMLEGAVKACLARGFELALWYLVRNLGPQEGCFQQAEKALVQRL 1334
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Match: A0A7S2S2Z3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S2Z3_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.750e-5 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 2
Query: 3710 LPSSQYEVRLNVSRGLGLSINITG-NDVRVKGFSPVQGGEIGPAQACGDIQVGDALVCVNHTQLRLLDHETVVRVLKSLLNTAGSQLLLLRFAHAENSPRLRGAPP 4024
LP +Q+EV L++S GLGLS+ T N V V GF + G+ GP +ACG + + D L+CVN T + V ++K+ T +L+ R++H E + PP
Sbjct: 1904 LPGNQFEVTLDMSEGLGLSLGWTNDNRVIVAGFRDLPNGDWGPVEACGLVGLKDQLLCVNDTSISGKSFVEVSELIKNSGKTI--KLVFGRWSHEEGPVSMSSPPP 2007 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig181.52.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig181.52.10 >prot_P-littoralis_Contig181.52.10 ID=prot_P-littoralis_Contig181.52.10|Name=mRNA_P-littoralis_Contig181.52.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2965bp MKERLLFHLRLGDSSSPQQLSRRKSPTGVVEIASTPAEGSAETPSAAAAAback to top mRNA from alignment at P-littoralis_Contig181:279021..301129+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig181.52.10 ID=mRNA_P-littoralis_Contig181.52.10|Name=mRNA_P-littoralis_Contig181.52.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=22109bp|location=Sequence derived from alignment at P-littoralis_Contig181:279021..301129+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig181:279021..301129+ >mRNA_P-littoralis_Contig181.52.10 ID=mRNA_P-littoralis_Contig181.52.10|Name=mRNA_P-littoralis_Contig181.52.10|organism=Pylaiella littoralis U1_48|type=CDS|length=8895bp|location=Sequence derived from alignment at P-littoralis_Contig181:279021..301129+ (Pylaiella littoralis U1_48)back to top |