mRNA_P-littoralis_Contig181.33.10 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig181.33.10
Unique NamemRNA_P-littoralis_Contig181.33.10
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 909 bits (2348), Expect = 1.010e-314
Identity = 449/619 (72.54%), Postives = 520/619 (84.01%), Query Frame = 1
Query:  625 GGIFGRLFSFFSRES----EEEETCLPQDPKANAVSRKKQLAAKQKNYTWRMGGTPIDMPFLDGFPPKDELPSITWTGKLVASLVRITLGSTRGTIGVGEIIEALSDPVRAKNFGPRLKRIITDAKGQERPVDISDFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDELLPLKPIGIQLSQGEAATPIFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            GG F R FSF S  S     + ETCLPQDPKA+   RKK+LA  QK Y WR  GTPIDMPFL+GFPPKDELPS TW  KLV+SL+   +G+TRG IG GEIIEA+S+P +AKNF  R+  +I +AK  +RPVDI+D+EDLHA+PIKTPDS+ DFD++DAFARQRLQG NCVV+EKCS ATR+KL +LD+DP Y+ LK+KVDSLM+AGKLFVVD  ++K ++++PL+ + RYLAP VALFEAVDDELLPLKP+GIQLSQG+ ATPIFTP+DGYNWKIAKACFEAADFIIHE VSHLS THVVLE PMVSMNRQLP+EHP+HALFAPHVEGTA INWGA ELLMP D AVDRLLANKIEDAW L+R K      TLER+SKDFSPE D A+RGMT ADFPGRYPYRD GLKYWDA +TWVKEYLNVYYST+ D+T DYELQAFV+E+  +GE +WL EW +S DK GLLAKV LASLIYSASTLHAAVNFPQK  MS+AP+NP SVY+ PPTDK +R FEDYLAYLPPLE+AT QV+  + LG+VF+T LG YEAN FSD RVLA LA+FQQA+E+IE D+VDENA+VVS+WR RGK+K+ AANFGYTTLLP+ +PQSINI
Sbjct:   66 GGFFSR-FSFPSLGSLFGSPDPETCLPQDPKADTSGRKKRLAKAQKEYPWRTRGTPIDMPFLEGFPPKDELPSRTWVSKLVSSLLGAVVGTTRGNIGAGEIIEAVSNPAKAKNFATRVSELIKEAKINDRPVDINDYEDLHAWPIKTPDSVFDFDEDDAFARQRLQGPNCVVLEKCSEATRQKLKVLDSDPTYENLKNKVDSLMKAGKLFVVDQHIVKEVQTAPLEDVPRYLAPCVALFEAVDDELLPLKPVGIQLSQGDTATPIFTPDDGYNWKIAKACFEAADFIIHEVVSHLSNTHVVLEGPMVSMNRQLPKEHPVHALFAPHVEGTALINWGADELLMPADAAVDRLLANKIEDAWALIRVK------TLERISKDFSPEVDFAARGMTKADFPGRYPYRDFGLKYWDAIYTWVKEYLNVYYSTDADITDDYELQAFVNELATVGEFKWLAEWDNSTDKKGLLAKV-LASLIYSASTLHAAVNFPQKTTMSFAPSNPASVYVTPPTDKTERTFEDYLAYLPPLEIATRQVILFTFLGNVFYTTLGDYEANQFSDQRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKEKRAAANFGYTTLLPEKVPQSINI 676          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 877 bits (2267), Expect = 1.110e-303
Identity = 430/613 (70.15%), Postives = 513/613 (83.69%), Query Frame = 1
Query:  631 IFGRLFSFFSRESEEEETCLPQDPKANAVSRKKQLAAKQKNYTWRMGGTPIDMPFLDGFPPKDELPSITWTGKLVASLVRITLGSTRGTIGVGEIIEALSDPVRAKNFGPRLKRIITDAKGQERPVDISDFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDELLPLKPIGIQLSQGEAATPIFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            +F RL   F   S   ETCLPQDPKA+   RK QL A ++++ +R   TPIDMPFL+GFPP D+ PSI+W  KL  ++VR  +G+TRGTIG+GEIIEA+SDP RAK F  RL+ +I++AK  ERPV+I+D+EDLHAFPIKTPD+M DFD++DAF RQRLQG  CVV+EKCS ATR+KL +LD DP+YK LKDKVDSLM+AGKLFVVDH ++K +E+SPL+GI RYLAPSVALFEAVDDELLPLKP+GIQLSQG++ATPIFTP+DGYNWKIAKACFEAADF+IH+ VSHL  TH+VLEAPMVSM RQLP+EHPIHALFAPHVEGTA INWGA ELLM VD  VDR+LA KI+ AW L R +      TLER+SKDFSPE D A+RG+T  DFPGRYPYRDVGLKYW+A HTWVKEYL+VYYS++ D++ DYELQAFV E+V +GE++WL E ++S D+   LAKV LASLIYSAS LHAAVNFPQ+P+MS+ P+NP S+Y+PPPTDK +R FE+YLAYLPPLE+A EQVV  ++LG+VFHTKLG Y+AN FSD RV A LA+FQQAIE+IE D+V+ENA+VVS+WR RGK KK AANFGYTTLLPD +PQSINI
Sbjct:    1 MFSRLTGLFG--SPNAETCLPQDPKADTAGRKNQLDAAREDFVFRQRRTPIDMPFLEGFPPDDQRPSISWVTKLAGAIVRANVGATRGTIGIGEIIEAVSDPSRAKTFVKRLRELISEAKVNERPVNINDYEDLHAFPIKTPDAMYDFDEDDAFTRQRLQGPTCVVLEKCSEATRQKLKVLDFDPSYKNLKDKVDSLMKAGKLFVVDHHLIKDVETSPLEGIPRYLAPSVALFEAVDDELLPLKPLGIQLSQGDSATPIFTPDDGYNWKIAKACFEAADFVIHQVVSHLGNTHIVLEAPMVSMYRQLPKEHPIHALFAPHVEGTALINWGADELLMEVDGGVDRMLAPKIDYAWALTRSQ------TLERISKDFSPEVDFAARGVTKTDFPGRYPYRDVGLKYWEAIHTWVKEYLDVYYSSDVDISDDYELQAFVKELVTVGEVKWLAELENSTDQKVFLAKV-LASLIYSASVLHAAVNFPQQPIMSFVPSNPPSIYVPPPTDKTERSFEEYLAYLPPLEIAAEQVVTGNILGTVFHTKLGDYDANQFSDKRVQAPLAKFQQAIEDIETDMVNENAFVVSSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 604          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 752 bits (1942), Expect = 3.580e-254
Identity = 371/617 (60.13%), Postives = 469/617 (76.01%), Query Frame = 1
Query:  622 AGGIFGRLFSFFSRESEEEETCLPQDPKANAVSRKKQLAAKQKNYTWRMGGTPIDMPFLDGFPPKDELPSITWTGKLVASLVRITLGSTRGTIGVGEIIEALSDPVRAKNFGPRLKRIITDAKG-QERPVDISDFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDELLPLKPIGIQLSQGEAATPIFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            AG     +  FF+  + E ET LPQDPKA+   RK+QL  ++K Y W   G P   P+LDGFPP DELPS+ W   LVAS+++I +G+ RG++G GEI+EAL+DP +AK F  R++ +I+      ERP DI D+EDLHAFPIK P SM D++D++AFAR RLQG NCVV+EKC+ +TREKL +LD+DP YK LK KVDSLM+ GKLFVVDH++LKG+E        RYL PSVALFE +DD+LLP++PIGIQLSQGE ATPIFTPEDG NW IAKACFE+ADFI+HE VSHL  TH+VLE PMV++NR LP+EHP++ L  PH+EGTA INWGA +LL+  + A+D L AN IE +W LV E+         R+++DFSPE D ASR +T  DFPGRYPYRD G++YW+ATHTWVKEYL++YY ++ DV  DYELQA ++E+V+IG++ WL+++  + DK  L+AKV+ AS IYSASTLHAAVNFPQKP MS+ P+ PGSVY PPP DK +R F++++ YLPP+E+AT  V  L+LLG +FHTKLG YE ++F D R+   LA+FQQAIE+IE D+V +NA VVS WR RGK K+ A N  YTTLLPDNIPQSINI
Sbjct:   52 AGFSLSSITDFFTS-NREGETSLPQDPKADQAHRKEQLEERKKEYRWSTEGPPEGAPYLDGFPPNDELPSVAWITDLVASVLKIAVGTLRGSLGAGEIMEALTDPAKAKTFATRVRELISGNSAIDERPADIGDYEDLHAFPIKNPKSMYDWEDDEAFARLRLQGGNCVVLEKCTQSTREKLKVLDSDPVYKKLKSKVDSLMDEGKLFVVDHELLKGVE--------RYLTPSVALFEVIDDDLLPIRPIGIQLSQGEEATPIFTPEDGNNWLIAKACFESADFIMHEVVSHLGSTHIVLEGPMVAVNRCLPKEHPVYDLLKPHMEGTALINWGAQDLLIQPNGALDILQANDIESSWDLVLEQF------FNRIAEDFSPEADFASRQITKEDFPGRYPYRDYGMRYWEATHTWVKEYLDIYYKSDKDVEEDYELQAMIEELVDIGKVYWLKDYYTTDDKKALIAKVI-ASWIYSASTLHAAVNFPQKPSMSFVPSCPGSVYAPPPIDKRERTFDEFMNYLPPMEIATIHVAMLTLLGDIFHTKLGQYETHNFDDDRIAEPLAKFQQAIEDIEDDLVADNADVVSGWRQRGKAKRAANNMAYTTLLPDNIPQSINI 652          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A835YNA1_9STRA (Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA1_9STRA)

HSP 1 Score: 305 bits (780), Expect = 5.290e-85
Identity = 220/655 (33.59%), Postives = 328/655 (50.08%), Query Frame = 1
Query:  688 LPQDPKANAVSRKKQLAAKQKNYTWRMGGTPIDMPFLDGFPPKDELPSIT------------WTGKLVASLVRITL--------GSTR-GTIGVGEIIEALSDPVRA---------KNFGPRLKRIITDA------KGQERPVDISDFEDLHAFPIKTPDSMADFDDND-AFARQRLQGANCVVIEKCSAATREKLVILDTD----PAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDD----ELLPLKPIGIQLSQGEAATPIFTPE-------DGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTA--DFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEW-KDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHF------SDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            LPQ   ++   R+++LA K K YT+     P   P +   PP D   S+             W  K+  + +R+ +        G+TR G  G G+    L++ V            + G   + I   A      KG  RP  + D+ D+     K P SMA     D A+   RL G N   I+KC    +  ++    D    P Y+ L+ ++ SL+EAG+L+ VD+    G  +    G  +Y+   +ALF    D      +PL+P+ IQ+     +  IF P        D Y W +AKAC + AD   HE ++HLS TH+V E    SMNRQL E HP+H L APH  GT  IN  A   L+     VD LLA  +++ + L+ ++  +        ++DFS E  +AS+GM     +FP  +PYRD G K W+A   WV  Y+ +YY +  D+  D E++A+VD+++   +++WLE+W     D   LL K+V A +I++AS  HAAVNFPQ PLM Y P  P S+Y PPP+   +    DY+    P+EVA  Q     LLG+V HT+LG Y+   F       ++ + AAL++F++ +++    +   N  +V+ W   G+ KK A  + YT L PD +PQ INI
Sbjct:   85 LPQHD-SDPDGRRRELAHKLKLYTFSREELPKGTPMITDVPPADTAWSLGGNPPEVFLYKAGWLWKVATTALRVAVDFIPAKLRGTTREGLRGTGKFANPLTNVVGGIVDLVLSPLDDLGRDERSIDEKAAAPGGEKGATRPTSLQDYADMFGPLWKPPKSMAPHGITDNAYTWYRLAGPNPNAIQKCRTTDQPGVLTQLKDALAQPQYQSLRSELKSLLEAGELYKVDYTWFHGTTTGVNQGPTQYMPSPLALFRLNRDPEARSRMPLEPVLIQVEAN--SKEIFQPPADESEGPDYYRWLMAKACVQVADNCHHEGIAHLSRTHLVTETFAGSMNRQLSERHPLHKLLAPHFWGTLIINNLARSALIAEGGTVDILLAPSLQELYPLITQEVKKW------KARDFSFEAVMASQGMRDLRDEFPYMFPYRDDGSKIWNAICKWVSSYIEIYYKSAQDLENDAEVKAWVDDLIAY-DVKWLEDWGAPGTDNRPLLKKLVSA-VIFNASAQHAAVNFPQTPLMCYTPAFPLSMYDPPPSLATEPEAHDYVRLFAPMEVAKTQKNVGLLLGTVRHTRLGQYDMAPFRRYFGTDNSDLTAALSKFRKDLDDARRAVDRRNRDLVAAWTAAGEKKKVAECYSYTLLRPDKVPQGINI 728          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A6P0MCQ4_9CYAN (Lipoxygenase n=1 Tax=Symploca sp. SIO2C1 TaxID=2607783 RepID=A0A6P0MCQ4_9CYAN)

HSP 1 Score: 255 bits (651), Expect = 9.820e-69
Identity = 183/523 (34.99%), Postives = 268/523 (51.24%), Query Frame = 1
Query:  958 PRLKRIITDAKGQERPV----DISDFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDG-------IVRYLAPSVALFEAV--DDELLPLKPIGIQL-SQGEAATPIFTPEDG-YNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPET---DLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLI-YSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            P L +I  D K +E P+     + DF++L    I  P     F +++ FA  R+ GAN V+IE+ S+A +   +  +      G  D +++ ME+G+L++ D+ +L G  +    G       I +YL   +ALF      D    L+P+ IQ  SQ     PI TP+ G Y W IAK   + AD   HEAVSHL+ TH+ +    ++  RQL   HP+  L  PH EGT  IN  A + L+     VD LL++ I+++  L         + +   +  F+       L SRG+        YPYRD  L  WDA + WV  YL++YY +++D+  D ELQA+  E+ +    R ++  +++     L      A+LI ++AS  HAAVNFPQ  LMSYAP+ P + Y+P  +  +    +DYL  LPP   A +Q+  L LLGS + T+LG YE  HF+D RV   L  F+Q +EEIE  I                ++++ A   Y  LLP  IPQSINI
Sbjct:  146 PLLGQIFEDLK-KEAPMLQATSLEDFKELFQ-TIDLPAIANTFQEDEVFAYMRVAGANPVIIEQMSSADKRLPITNEQYQEVMGSDDSLEAAMESGRLYLADYSILAGAINGTYTGFLHPHLQIQKYLYSPLALFAVPPGSDPNRMLQPVAIQCHSQPSPENPIITPKTGEYAWLIAKTVVQIADTNFHEAVSHLARTHLFVGPFAIATPRQLSNTHPLSLLLEPHFEGTLAINNAAQKSLISSGGGVDSLLSSSIDNSRVL---------AVIGLQTYSFNQAMLPKQLKSRGVDNTQQLPVYPYRDDALLIWDAIYQWVSAYLSLYYKSDEDIQQDQELQAWAKELTDFNGGRVIDFGEENGQIQTLKYLTEAATLIIFTASAQHAAVNFPQLGLMSYAPSMPTAGYLPVESLGSHTTEQDYLNLLPPRNQAQDQLNLLYLLGSTYFTELGQYENGHFNDPRVQTPLQTFKQKLEEIEATI----------------EQRNLARPAYQYLLPSKIPQSINI 641          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A836C6W3_9STRA (Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W3_9STRA)

HSP 1 Score: 252 bits (644), Expect = 4.230e-67
Identity = 178/505 (35.25%), Postives = 269/505 (53.27%), Query Frame = 1
Query: 1042 PIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDE---LLPLKPIGIQLSQGEAATPIFTPEDGYN-------WKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSK-DFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLL--AKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEA----NHFSDTRVL------AALARFQQAIEE----IEIDIVDENAYVVSTWRTRGKDKKDAANFG--YTTLLPDNIPQSINI 2469
            P +  D ++D    +AFA  RL G N   I+KC++A   KL        Y+ L+ +V+ LM  G+L+V+D+ M +G  +  L+G+ +Y+A  +ALF    ++    LP+ P+ I+++    +T +F P    N       W++AKAC +AAD   HE  +HL  TH+V+EA  V   R L E HP+H L A H +GT  IN+ A   L+  + +V +++  +IED    V        + L+   K D SP   L  +GM  A+FP  YPY+D  L+ W+ATH WV  Y++ +Y    ++  D E + +V  +V  GE  +L  W D K+ +  L   K +LA++I++ S  HAAVNFPQ  +M++ P  P +++ PPP D + +   ++L  L P+ VA  Q     LLGSV+HT+LG Y      N+F     +      AA+ + Q A+      I   I D N  + + WR    D  D A+ G  Y  L PD IPQSINI
Sbjct:  237 PAQRGDGLSD----EAFAWYRLAGPNPNAIQKCTSAHIAKLQGALKQDKYRKLRARVNELMAVGELYVLDYTMFEGQLTDKLEGMQKYMASPLALFRLNSEKHRKRLPIVPLLIRVATN--STELFQPPANTNPRGDENAWQMAKACVQAADGCYHEGFAHLGRTHLVMEAFAVCTERWLSERHPLHRLLAQHFQGTLNINYLAGTSLIQPNGSVAQMVGMEIEDLNRKVT-------ADLKEFKKLDMSPAAMLGRQGM--AEFPHLYPYKDDALQVWNATHAWVSAYVDAFYLYPKELRRDDEARDWVKSLVTEGEFEFLSCWVDDKECIIPLDELKKLLATIIFTGSAQHAAVNFPQPSIMAFTPAYPLALWAPPPDDPSPKTELEHLDMLAPMGVAKLQRSVALLLGSVYHTRLGHYNLVPGFNYFKARLAVNRGVAFAAVEKAQAALAADLGAIAARIDDRNDRLEAAWRA---DAPDHASKGWRYEHLRPDRIPQSINI 723          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A2D8B1R0_9SPHN (Arachidonate 15-lipoxygenase n=12 Tax=Sphingomonadales TaxID=204457 RepID=A0A2D8B1R0_9SPHN)

HSP 1 Score: 250 bits (638), Expect = 5.540e-67
Identity = 212/681 (31.13%), Postives = 308/681 (45.23%), Query Frame = 1
Query:  679 ETCLPQ-DPKANAVSRKKQLAAKQKNYTWRMGGTPIDMPFLDGFP-----PKDELPSITWTGKLVASLVRITL--------------------------------------------GSTRGTIGVG-------EIIEALSDPVRAKNFGPRLKRIIT------DAKGQERPVDISDFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIE-------KCSAATREKLVILDTDPAYKGLKDKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDELLPLKPIGIQLSQGEAATPIFTP----EDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFED-YLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEA------NHFSDTRVLAA---LARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            +  LPQ D  A   +R+ QLAA Q  Y W        +P L+G P     P  E+P++ W  KLV  L+ + +                                            G   G  G+         + +A       KN   +LK II        A G+ERP  +  + D     I  P     F D+  FA  R+ G NC++IE       KC+   ++   ++  D    GL        E G+LF  D+  L  +E    DG  +YL   VALF AV      L P+ I      AA+P+ TP    E  + W++AK   + AD   HE  +HL+ TH+V+EA  ++ +RQLP  HPI+AL   H EGT FIN  A   L+     +D + A  IE +    ++ A +   T +  +K   P+ D+ +RG+      G YPYRD GL  W+A  +W K Y+  YYS++ DVTGD ELQA+   + + G+L+        +  + +         I++AS  HA+VNFPQK +M YAP   G+ + P P D  K G +  +LA +PP  +A EQ+  L LLGS+++  LG Y +        F D ++      L+RF+ A++++E  IV  N+      R R           YT LLP  IP S NI
Sbjct:    8 DPSLPQNDTPAQRKAREAQLAASQALYQWTDA-----VPSLEGVPVVKTLPTAEMPTLEWWLKLVKILIEVAINQIEVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKIAGDVSGHKGIVVLATDCVHMFDAEVAIADLKNHATKLKGIIELRGATKAALGKERPRTLQTYLDNFK-TISVPPIAYTFQDDLEFANLRVAGPNCMLIEAVTKIPKKCAVTAKQYAAVVPGDTLDAGL--------EEGRLFQCDYSPLSIIEPGEWDGSAKYLTCPVALF-AVPPGGQSLVPVAINCDPSNAASPVMTPSMSTEKQWGWEMAKLVVQVADGNYHELFAHLARTHLVIEAIAIATHRQLPHAHPINALLVRHFEGTLFINDAAANSLIVAGGPIDHIFAGTIESS----QQAAVQARLTFD-FAKGMLPQ-DIVARGVGADSALGDYPYRDDGLLVWNAIESWAKAYVRTYYSSDKDVTGDTELQAWAAAIADSGKLKGFSAPSTIQQLVDICTMT-----IFTASAQHASVNFPQKAIMEYAPAVTGAFWQPAP-DTQKGGTKTGWLAMMPPEVLALEQLKVLFLLGSLYYRPLGTYRSPDFPYPQWFQDPQITGKGGPLSRFRAALQDVEEQIVARNSE-----RMRP----------YTFLLPSLIPCSTNI 646          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: UPI001683DDF3 (hypothetical protein n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI001683DDF3)

HSP 1 Score: 251 bits (641), Expect = 1.580e-66
Identity = 170/491 (34.62%), Postives = 252/491 (51.32%), Query Frame = 1
Query: 1045 IKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDT--DPAYKGLKDKVDSLMEA---GKLFVVDHDMLKGLESSPLDGIV---RYLAPSVALFEA--VDDELLPLKPIGIQLSQGEAATP----IFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVV--LASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            I  P+  + F ++  FA  RL G N +++E+ SA      V+ +   +  Y+ +    DSL  A   G+L+  D+  L+ +++          +Y+   + LF           L P+ IQ      +T     +FTP  G +W +AK+  + AD   HE VSHL  TH+V+E   ++  R+LP  HP+  L APH++GT  IN+GAH++L+  +  VD LLA  I+D   L  E A  C      ++    P+T L  R ++  +    YPYRD GL  W+A  TWV  YL +YY   + + GD  LQA+ +E+V+    R  +  +D+   +  L  ++  ++++I+ AS  HAAVNFPQ  LMSYAP  P + Y P PT     G  D  + LPPLE A  Q+    LLGS+++T+LG YE  +F D +V  AL  F+  + E E +I   NA               +  F Y  LLP  IPQSINI
Sbjct:  277 IPVPELSSRFQEDSIFAYMRLAGPNPIMLERVSAEDAFLKVVKEQLKEGEYERIIQTSDSLEVAAQEGRLYKADYSKLRDMKNGTYPNSSNKSKYVGAPLTLFAVPPTGHSSRSLVPVAIQFLPPSDSTDGNSSLFTPLSGESWAVAKSIVQMADANYHELVSHLGQTHLVIEPFAIATKRKLPRNHPLRILLAPHLQGTILINYGAHKMLIADEGKVDILLAATIQDDRKLAIEGAKACLLNFNEIA---FPKT-LEKRQVSDREKLPEYPYRDDGLLIWNAIQTWVNAYLKIYYPNNEQIVGDSALQAWAEELVSPAGGRLEQFGEDASGAIKTLDYLIEAVSTVIFIASAQHAAVNFPQNELMSYAPAFPLAAYAPSPTRDTPIG--DLASVLPPLEQAMTQIGVTYLLGSIYYTQLGQYEKGYFQDEKVKPALDVFKTQLHEAEEEIKKRNA---------------SRQFPYPFLLPSRIPQSINI 746          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A357A568_9CYAN (Lipoxygenase n=1 Tax=Cyanobacteria bacterium UBA11691 TaxID=2055778 RepID=A0A357A568_9CYAN)

HSP 1 Score: 249 bits (637), Expect = 2.270e-66
Identity = 169/490 (34.49%), Postives = 262/490 (53.47%), Query Frame = 1
Query: 1018 DFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLK--DKVDSLMEAGKLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDELLP--LKPIGIQLSQGEAATP-IFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEE-HPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            D+E L       P S+++F  +  FA  ++ G N V++++         +   T   Y+G+   D +++ ++ G+L++ D+  L+ L S    G+ +Y+   VALF    D+     L P+ I+  Q       +FTP DG NW  AK   + AD   HE +SHL+ TH+ +E  +++ NR   ++ HP+  L  PH+EGT FIN+ AH+ L+     +D LL   I     L  ++A    S L   ++   P T L  RG+  +     YPYRD GL+ WDA + WV EYL ++Y ++  V  D +LQ++  E+++ G     EE +D + K        ++++I++AS  HAAVNFPQ  LM+YAP  P   Y P PT   ++  ++++  LPPLE A  QV  L LLGSV++TKLG Y  + F D RV  AL  F++ +  IE  I++E++  + ++R                LLP NIPQSINI
Sbjct:  237 DYERLVGSLSIKPASLSNFQQDKVFAYMQVAGPNPVMLKQIKKVDSGLSI---THEQYQGIVFGDSLEAALQEGRLYLADYSKLEVLLSGNFAGLQKYMYAPVALFAVPPDKHSDQNLLPVAIRCKQASGNDSCVFTPRDGDNWMTAKTVLQMADSNYHELISHLAQTHLFVEPFVLATNRCFADKNHPVRLLLKPHLEGTIFINYAAHKFLLAPKGPIDSLLGATIGSNSQLAIKEAQ---SRLANFNEVAFPGT-LEKRGVNNSKQLPIYPYRDDGLRVWDAINQWVNEYLRLFYESDCSVETDEQLQSWAHELLSKGGCHIGEE-RDGRIKTLDYLVTAVSTVIFTASAQHAAVNFPQGGLMTYAPAFPLGCYSPAPTQPQQQ--QNFMGLLPPLERAELQVTVLYLLGSVYYTKLGDYSGSLFKDERVKKALDSFKEKLANIEKAILNEDSQRLVSYRY---------------LLPSNIPQSINI 701          
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Match: A0A4P2QUL1_SORCE (Lipoxygenase domain-containing protein n=5 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2QUL1_SORCE)

HSP 1 Score: 247 bits (631), Expect = 7.930e-66
Identity = 181/544 (33.27%), Postives = 273/544 (50.18%), Query Frame = 1
Query:  877 LGSTR-GTIGVGEIIEALSDPVRAKNFGPRLKRIITDAKGQERPVD--ISDFEDLHAFPIKTPDSMADFDDNDAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAG---KLFVVDHDMLKGLESSPLDGIVRYLAPSVALFE--AVDDELLPLKPIGIQLSQGE-AATPIFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMVSMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIEDAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVGLKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEWKDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMPPPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEAN----HFSDTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTTLLPDNIPQSINI 2469
            LG+T   T  VG+II++L D +   +   +L   +    GQ   V   +S+F+       + P+  + + D+  FA  R+ G N +V+++ ++      V   TD  Y+ +  + DSL  AG   +L++ D+++L  L         +Y+   +ALF   A       L+P+ IQ +Q   AA+PIFTP DG  W++AK   + AD   HE +SHL  TH+V+EA  ++  RQL  EHP++ L  PH +GT  IN  A   L+     VD LLA  I  +  L  +           +++ F P   LA RG+        YPYRD     W A HTWV  YL +YY+++ DV GDYELQ +  E+ +       +  +D   +       +L  +I++AS  HAAVNFPQ  LMS+ P  P + Y P P+  A     +   +LPPL+ A  Q+  + LLG V++++LG Y+ N    +F+D R+   L  FQ+ + +IE  I                 K++   F Y  LLP  IPQSINI
Sbjct:  162 LGATNYPTKKVGDIIKSLLDAL--VSAAGKLLLSLVGMYGQATGVYDYVSEFQ-----TFRLPEIASVYQDDSIFAWLRVAGPNPLVLKRVASPGASFPV---TDTQYRSVMGEGDSLARAGAEGRLYLADYELLSQLVPGTAPDQQKYVEAPLALFAVPAAGSPSRLLRPVAIQCAQTPGAASPIFTPSDGVAWEVAKLHVQVADGNFHELISHLGQTHLVMEAFAMATPRQLAPEHPVNVLLTPHFQGTLAINNAAEADLIAPGGPVDNLLAGTIASSTRLAVDAV-----LSYSVNQQFLPVA-LARRGVDDPSTLPSYPYRDDATLLWGAIHTWVSRYLAIYYTSDADVLGDYELQGWFAELSSPSGCGLKDIGEDGAIRTVAYLANLLTHVIFTASAQHAAVNFPQSSLMSFTPALPLAAYAPAPSITAGLPSSEIFQHLPPLQQALLQLNVMMLLGGVYYSRLGDYDRNIPGAYFTDARIREPLEAFQRELMDIEATI----------------GKRNLQRFPYVVLLPSQIPQSINI 673          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig181.33.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K920_9PHAE1.010e-31472.54Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KD72_9PHAE1.110e-30370.15Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
D8LBX4_ECTSI3.580e-25460.13Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YNA1_9STRA5.290e-8533.59Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A6P0MCQ4_9CYAN9.820e-6934.99Lipoxygenase n=1 Tax=Symploca sp. SIO2C1 TaxID=260... [more]
A0A836C6W3_9STRA4.230e-6735.25Lipoxygenase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A2D8B1R0_9SPHN5.540e-6731.13Arachidonate 15-lipoxygenase n=12 Tax=Sphingomonad... [more]
UPI001683DDF31.580e-6634.62hypothetical protein n=1 Tax=Oscillatoria sp. FACH... [more]
A0A357A568_9CYAN2.270e-6634.49Lipoxygenase n=1 Tax=Cyanobacteria bacterium UBA11... [more]
A0A4P2QUL1_SORCE7.930e-6633.27Lipoxygenase domain-containing protein n=5 Tax=Sor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig181contigP-littoralis_Contig181:193789..210333 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G112
PFAMsC2,Lipoxygenase,PLAT
Model size4373
Max annot lvl2759|Eukaryota
KEGG rclassRC00561,RC00839,RC02139
KEGG koko:K00461
KEGG ReactionR01595,R03058,R08527
KEGG Pathwayko00590,ko01100,ko04664,ko04726,ko04913,ko05145,map00590,map01100,map04664,map04726,map04913,map05145
Hectar predicted targeting categorysignal peptide
Exons19
Evalue0.0
EggNOG OGs28IFU@1|root,2QQSP@2759|Eukaryota
EC1.13.11.34
Descriptionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Cds size2289
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig181.33.10prot_P-littoralis_Contig181.33.10Pylaiella littoralis U1_48polypeptideP-littoralis_Contig181 193972..208432 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789874.867717-UTR-P-littoralis_Contig181:193788..1939711680789874.867717-UTR-P-littoralis_Contig181:193788..193971Pylaiella littoralis U1_48UTRP-littoralis_Contig181 193789..193971 +
1680789875.2202582-UTR-P-littoralis_Contig181:208432..2103331680789875.2202582-UTR-P-littoralis_Contig181:208432..210333Pylaiella littoralis U1_48UTRP-littoralis_Contig181 208433..210333 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789874.8853178-CDS-P-littoralis_Contig181:193971..1942201680789874.8853178-CDS-P-littoralis_Contig181:193971..194220Pylaiella littoralis U1_48CDSP-littoralis_Contig181 193972..194220 +
1680789874.8964787-CDS-P-littoralis_Contig181:197087..1973191680789874.8964787-CDS-P-littoralis_Contig181:197087..197319Pylaiella littoralis U1_48CDSP-littoralis_Contig181 197088..197319 +
1680789874.9097068-CDS-P-littoralis_Contig181:197574..1976811680789874.9097068-CDS-P-littoralis_Contig181:197574..197681Pylaiella littoralis U1_48CDSP-littoralis_Contig181 197575..197681 +
1680789874.9203453-CDS-P-littoralis_Contig181:198230..1983491680789874.9203453-CDS-P-littoralis_Contig181:198230..198349Pylaiella littoralis U1_48CDSP-littoralis_Contig181 198231..198349 +
1680789874.9288788-CDS-P-littoralis_Contig181:199323..1994351680789874.9288788-CDS-P-littoralis_Contig181:199323..199435Pylaiella littoralis U1_48CDSP-littoralis_Contig181 199324..199435 +
1680789874.9371483-CDS-P-littoralis_Contig181:200099..2002081680789874.9371483-CDS-P-littoralis_Contig181:200099..200208Pylaiella littoralis U1_48CDSP-littoralis_Contig181 200100..200208 +
1680789874.9514875-CDS-P-littoralis_Contig181:200877..2009601680789874.9514875-CDS-P-littoralis_Contig181:200877..200960Pylaiella littoralis U1_48CDSP-littoralis_Contig181 200878..200960 +
1680789874.9626749-CDS-P-littoralis_Contig181:201365..2014371680789874.9626749-CDS-P-littoralis_Contig181:201365..201437Pylaiella littoralis U1_48CDSP-littoralis_Contig181 201366..201437 +
1680789874.9736633-CDS-P-littoralis_Contig181:201893..2020041680789874.9736633-CDS-P-littoralis_Contig181:201893..202004Pylaiella littoralis U1_48CDSP-littoralis_Contig181 201894..202004 +
1680789874.982913-CDS-P-littoralis_Contig181:202571..2026661680789874.982913-CDS-P-littoralis_Contig181:202571..202666Pylaiella littoralis U1_48CDSP-littoralis_Contig181 202572..202666 +
1680789874.9992323-CDS-P-littoralis_Contig181:203423..2035801680789874.9992323-CDS-P-littoralis_Contig181:203423..203580Pylaiella littoralis U1_48CDSP-littoralis_Contig181 203424..203580 +
1680789875.0101812-CDS-P-littoralis_Contig181:204144..2042451680789875.0101812-CDS-P-littoralis_Contig181:204144..204245Pylaiella littoralis U1_48CDSP-littoralis_Contig181 204145..204245 +
1680789875.0238755-CDS-P-littoralis_Contig181:204949..2051001680789875.0238755-CDS-P-littoralis_Contig181:204949..205100Pylaiella littoralis U1_48CDSP-littoralis_Contig181 204950..205100 +
1680789875.1524298-CDS-P-littoralis_Contig181:205571..2056191680789875.1524298-CDS-P-littoralis_Contig181:205571..205619Pylaiella littoralis U1_48CDSP-littoralis_Contig181 205572..205619 +
1680789875.1690712-CDS-P-littoralis_Contig181:206023..2061161680789875.1690712-CDS-P-littoralis_Contig181:206023..206116Pylaiella littoralis U1_48CDSP-littoralis_Contig181 206024..206116 +
1680789875.1800385-CDS-P-littoralis_Contig181:206368..2064941680789875.1800385-CDS-P-littoralis_Contig181:206368..206494Pylaiella littoralis U1_48CDSP-littoralis_Contig181 206369..206494 +
1680789875.1895306-CDS-P-littoralis_Contig181:207328..2074321680789875.1895306-CDS-P-littoralis_Contig181:207328..207432Pylaiella littoralis U1_48CDSP-littoralis_Contig181 207329..207432 +
1680789875.2003522-CDS-P-littoralis_Contig181:207869..2079741680789875.2003522-CDS-P-littoralis_Contig181:207869..207974Pylaiella littoralis U1_48CDSP-littoralis_Contig181 207870..207974 +
1680789875.2115226-CDS-P-littoralis_Contig181:208317..2084321680789875.2115226-CDS-P-littoralis_Contig181:208317..208432Pylaiella littoralis U1_48CDSP-littoralis_Contig181 208318..208432 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig181.33.10

>prot_P-littoralis_Contig181.33.10 ID=prot_P-littoralis_Contig181.33.10|Name=mRNA_P-littoralis_Contig181.33.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=763bp
MYRFLSYALLLPLLLYDIRIVSSVCCRDEIRCCACMGVMIPSIMGARQQP
PTPFDIHLVQQPGITVTDRSDHQQEGRSTNIIHVARPRSMRGTAAASTLL
LAFCGMQGGMLARAAEEAGSCSVDAAGGGSCQTPVVTERASAEAVPAGGI
FGRLFSFFSRESEEEETCLPQDPKANAVSRKKQLAAKQKNYTWRMGGTPI
DMPFLDGFPPKDELPSITWTGKLVASLVRITLGSTRGTIGVGEIIEALSD
PVRAKNFGPRLKRIITDAKGQERPVDISDFEDLHAFPIKTPDSMADFDDN
DAFARQRLQGANCVVIEKCSAATREKLVILDTDPAYKGLKDKVDSLMEAG
KLFVVDHDMLKGLESSPLDGIVRYLAPSVALFEAVDDELLPLKPIGIQLS
QGEAATPIFTPEDGYNWKIAKACFEAADFIIHEAVSHLSYTHVVLEAPMV
SMNRQLPEEHPIHALFAPHVEGTAFINWGAHELLMPVDEAVDRLLANKIE
DAWTLVREKANECCSTLERMSKDFSPETDLASRGMTTADFPGRYPYRDVG
LKYWDATHTWVKEYLNVYYSTEDDVTGDYELQAFVDEVVNIGELRWLEEW
KDSKDKLGLLAKVVLASLIYSASTLHAAVNFPQKPLMSYAPNNPGSVYMP
PPTDKAKRGFEDYLAYLPPLEVATEQVVALSLLGSVFHTKLGAYEANHFS
DTRVLAALARFQQAIEEIEIDIVDENAYVVSTWRTRGKDKKDAANFGYTT
LLPDNIPQSINI*
back to top

mRNA from alignment at P-littoralis_Contig181:193789..210333+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig181.33.10 ID=mRNA_P-littoralis_Contig181.33.10|Name=mRNA_P-littoralis_Contig181.33.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=16545bp|location=Sequence derived from alignment at P-littoralis_Contig181:193789..210333+ (Pylaiella littoralis U1_48)
TGATCACAGCGTGCCCTCGCGTCGAGCGCTCCAGCCACAGTCAGCGGAAG GTTGTTCGTTCTTCCGTGTCCTACATAGAGGTGTGTGGAGGGCTTGTCCA GAATGTACAACAGTGTGGGTACTGTCGTGGCTCTTTTTGCATGTGGCTTG TGGCCTACAGCAGTTTAGACCCATTCCTGTGAGATGTACCGGTTCTTGTC TTATGCCCTGCTGCTGCCGCTGCTGCTGTACGATATACGTATCGTTTCGA GTGTCTGTTGTAGGGATGAGATCAGGTGCTGTGCGTGTATGGGTGTCATG ATCCCATCTATCATGGGCGCTAGGCAGCAGCCTCCCACTCCATTCGACAT ACATCTGGTGCAGCAGCCGGGGATCACGGTCACAGATAGATCAGATCATC AGCAGGAGGGAAGATCAACGAACATAATACATGCAAGTACTGCTGTAGCA AGAAGGGTGTTTTTCTTGTTTTCTTTTCCCCCACCTTTTCCGCTGTGTCT TTTTGATTCTCAGACGTTTCAACTCGCCGACCGCTTTCGTCTCGCCCATG GCCACAAACCAGGCACATACAGCATCGTGCTAAGTGTGTGTCGGGTTCGA AGTGTGTTGCCGCCCCCTCCATTCCGTGCGCTAGTCTATTACACCTCTCG GAGGTATACGGTAAGTTTGACGCACCAGCCTCCCGCCCAGCCCCGCCCGC CGGGGTCACGCAGAGAACACACGGAGAAGGCTGTTGTTGTTGTTGATTCT CACATTAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAAACAGGCA CGTATCGTGCTGCAGCAGCAGGAGGTTAAAAAAAGAAAAAGAAAATAAAT GGACTATGATCACCCATAGTCAAATCAGATAGGGTACCGTTGGGGTACCA TCTGTGGTGTCCAAAGTACCAAACAAAATACAGAAAAAAAAAATAACAGG TTCGAAAGAAAAAACAAAAATTGGAAACAGTACAACACACAAACAAAATA AAACAAGACAAACCTCAACCATAACCATATACTTCGAAGTACTTCGTACA TCGAAGCAGGGCCCAGGGCCATGACAGACCAAGGCAAAGGCAAACCAGGG CGATGGTCCGTAACTACATGATCATTAGACGAAAGGCAAAATAAAAAAGA AGATACAGGGAGGGCACAAAGACCGAGGGAGTGGACTCGTGCACAAACAC GACAAACAGGCCGCCAAACAAAGAGGAAGCAGGGGAACGAAAAGGGAAAA GAAAAGAAGAGACAAAGAGGGACAAAATACATACCTGGTGCGAAGTACAT GGAGAGTGCAGAGGGAAGACCGGAAGTACCGGCAGTGGGGGGGGGGGGGG GTGATGATGATAAAATAAAAGGCATGCAATCAATCACAAACATGTCTTGC CACGAGGTCTGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTCATGCCTC CTGCTACTGGCACCACCGTACCCAGTTGTTTCTGCCCCACATCTTTGGCA GCAGCTACACCACCGCTCCGAGATTTCCGCCCTGCAGGTTTTCCACTCTG GCCACCCCGTAGCTTGGCTTTGGGCTGCTTCTTCTGCCGTGCAACTCCAA CCCCACTACCCCGCTGCCCTTGTGCCCCCCCGTACTCCTCCTCTCGTTTA TCCCCGCCATCCGTTCTCCCTCTTTGGGCCAAGGCCTGCCCCTCAGCCGC GTCCCTCTCCCTTTTCAGTCGACGTGTCTCTGATAAGTCTCCCTCTTTCT TGAGCCAGTCGTCCGTGAACCGCCGCGCACCCTCGTCGATCCTGTCGTAC CACTCGTTAGCTCTCTTGGCACTTGCCTCCCACCCCTCTTTTTTGTCGAT AGCGATGTCGAACGCTTCGAGGTCCTCCTGCATTCGCCTCAGCCAGCCAA ACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCAATTCTCCCGAAAGA GCAATTTTCGGGAGCCTCTCGTCCCTCATGCGCGCAACGAATCCTGCGAA GCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTCGTCGCAACCCG CGGTGATCAGGGCTTTGGCGTCTACTTGCAGGATCAACACAGCAGTTTTT TTTTGTTTCTCCGCCCTTCTATTCCTTCGGCTGTACTTGCCATTTGCCTT CAACTATTTTTCGCCGCCTCTTTCCTCTCCACCTATCGCCTTTCGCGCAA TATCGCAGTATCGCTCTGCATCGCTGAAAAGCAGCACTGCTGAAGGTACG GCGCGAGATCAAGCCTCCCCAGGGACCCCAAGATACTGTATTGTAAGAGG TCGGGCCTCGCATGAACAGTTTGTAATTCCTTGAGGGTCAACAAAGCTCG AATCGTAATTCCTTGGAGGGGGGGGGGGCAAAAAATCACGAGGAATTAGA GCAGCCCTGATTCGTTTTTCAGCCGTCACGATGCGGTGTCATTGTTGATC CGTTAATCTGAATTTGGTTGCTTTGGAGAATGCGGAATCTAGAATAATAT TGCAACCTTTTTGCTTTTACCTTCTCCTAAAATTCCTGCTTCGGATTCGC CCGCGGGTAACGACCTAGATTCGCATCCGATCCGTTTGTTCATCGGGGAT ACACACGCAGATATGATACAGTAGTACAGTACGGCAGCGTCGCAAATACA AGCATGCCTACAGATCATATGTAGGTACCAGACAGATTCGGCAGACACAG CAACTCCCCCATGTCCATCGCTGAAACTCGTTTCGTCTACCTGAGCTGCT GCTGTTAAGGCATGGGACTGCTCCACCCGTATCATACGCCACATCGGCAA GCTGTGGCAATTTCGAGCAACTTCGATTGTGATGAGTCTGCGCTGTCCGC AATTGAATGAAAGAGTTCTCTGAGTTGACCCACGTTTATATCCCACTCCA GTAAAAACTGCGAACTGAATGCGGGAGAGAATGGCGCTCGAAACACGCTG ATATTTGAATAACCCCGATCTCTCGCGTAAATGCCTCTTTTGAAAAATCC ATGTTATCCATGGGGGATTGAAATACAACCAAGATGATTGCGATACAAAC GGCAGTCAGGCGGGGCACCGCGAACGATTTTTACAGCCAAAAGCACAATC ACGGAACCCCAAGCGTCCGAGAACGGATCAACTGTTGGATCCCGCTCAGC GTTGCCCGAAATAGCGGTACCTGTCACACAGGTTTTTTAGCTACTGCTGC TATCATAGCTGCATTGTGTGTACCTCAACAGCCGCTGTTCGATTAAATCA TGAAGAAAGGTTTCACGTTTGCACGTGCTTTTCGTCCTTCGTGCCGCAGG TGGCTCGCCCAAGGTCGATGAGAGGAACTGCGGCGGCCTCAACGTTGCTG CTGGCGTTCTGCGGAATGCAAGGCGGAATGCTGGCTCGAGCGGCTGAGGA GGCGGGTAGCTGCTCCGTGGATGCAGCAGGGGGGGGGTCGTGCCAGACCC CAGTGGTGACGGAGAGAGCGAGCGCTGAGGCTGTTCCTGCAGGTGGAATA TTCGGGAGATTGTTCAGCTTCTTCAGCAGGGGTAAGTATTTCAGGGGCAC GGGAATTGTGTCGATACGCATGTACCATATTGTTTGTGGTTTCAATCAAT TTAATGAGTGATCTGGGCATCGTACCATAGCTCATTTATTTACCATTCGT AGCCCTGATTGAGTGTTATTCTATTCCACCATGTTGACTGCTTTAAGTGG ATTTTTCTGGATTTTTCTGGCTAACAAATACTTCACCGATCAAACATGCT TCCATTTGTTTGGAACCGACCATTTCACGCCACCAGAGTCTGAAGAGGAG GAGACTTGTCTGCCTCAGGACCCGAAGGCGAACGCTGTTAGCCGCAAGAA ACAGCTGGCCGCGAAGCAGAAGAACTACACCTGGAGGATGGGGGTGAGAA ATAGATGCTGCGACGATCAAATCGGCACAAAGATTATGAAATATAGATCC CACAACTCTACAACACATTCTAAAGGGCAAGGAATGCTGGAAACCCCATC AAGACGTTACCGCTGTTGCAATAGCCTGGATCAGCGTGTTGCTTTTAGCC CGGTCATGTTGTGCGCGTACGACCTCGACCGAAACACATGTATCGAGGGG AGCAATGGAATGTTTCCCGGTACAGCAGCAGCACACCATAATCTCGGGTA AAAACTCCGCTGCTGCTGTACTCTCGAGGTTTAACACCATCACCACACAG CAGCGACTGACGTAAAACAATGTTTTGTTGTCGTGACGAAGGCGTTCAAC CCTGCTATATGTATGGAGATAGGGAATGCTCAAACCTCGGCGTCCCTCTC AGAACCACGCCACCCGCAGATAGAAGTGCGTTATTGGTGAAACATTGGAC AACTGATTTTCGCCCGCCCCGGCCTCTTTGATGCTTTCAAGCGCCCTGCC TGCCGATGCACTCTGCTGTGAACCATGTTCACGGTGCTGCAGGGCACCCC CATCGACATGCCCTTTCTCGACGGGTTCCCTCCGAAAGACGAACTCCCCA GCATCACGTGGACCGGCAAGCTAGTCGCCTCCCTCGTGCGGATCACTCTG GGCTCCACAAGGTACAGCAGTGGTACAGTGCAAAGAGCAGGTTATGAATA CGACGATGGTTTGATGCCCGTTACGATTCTTGCCGTCGGAACAAGTCAAG TGCGATGAATTACACAAACACGCCGGTTTTGTTTTGGGTTTGAGTAAGTT TTGCGACCCTTTCACATACTTCCACGGGCCCCCACAACCCCGCGCTCTTA TAGCCTATGAATAATGATTGTTCTCCCTCGGGTGAACCAGTCCAAACTTC AGTCAAGTACTGCTTTTGGAATACACCCCTGTCTGTGCCTACGCAGTTAC GGCAGCCGACTTGTCGCACTCTTGACACTTATTTCAGAGTCGACAGAGTC TTGATCGGCTCCGTTTTGACGCTTCGACACCGCCGTGTCATCTCGTGCGA CAGACTCGTTGATACGAATTTGTGTTTCCGTATCGAGTAAACTTGCTGCT GTTGCCATGATTGCTTTTGCCGGGGCAAGTACAACTTTGCACCTGACCCT CCTCTACGTCTTGTGTCAAGCGAGAGGTGCTTGCTGCCACCGCGCGTCGT ATCGCGAGCAAGCACTTCTGCTTCATCAGGCCGTGCCTCCGTTATGTCTG ACGTGTATGGCTTTGGAAGCCTTCATACTTGAAGGTATACGGTATGTGTT AATGCCAATCTCTACCGTAGGTTTACTCCCAATAATCGACGAACCGTATC CGCCCAGAACGTAGACGACCAATCATCTCGCGCCTACTCCCCTCCCCTCG CTACCCCGGCTCGCTGCCCTTAACGTGAGACCTCATGAACGCCATCGAGA AAATGGAGAAACGAAGGCAACAAAATCAATACATAAAAGCACCGCCCCAC CACAAAACGCGTTCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCT CTTCCTTTCCATTATTTCCTCATATTTGTTAATTCCAATTTGTCCTTCAA TTTTTCCTGACATTTTTCCGCCCTTCCTCCTGCAGGGGAACAATCGGTGT CGGAGAGATCATCGAGGCCTTGTCGGACCCCGTCAGGGCCAAGAATTTCG GGCCCAGGCTCAAAAGGATCATCACCGACGCAAAGGGACAAGAGAGGGTG AGAGGGCAAGAGCTTGCGGCGTGAACTTCAACGTTTACATCGAACTCCGC CCCAAGGTTCCACCATAATCCCGCTAGAGGTTCTGAGTGTTATTCTCTGT GCTGTGCTCGTCATGTGGCCTATGACCATAATCCTTATGATACTCTGGTT TTGTTTTCCGGTGCTGTTCATGTCGCCAACTTGACGCTCTCCGTGTTGCA TTTCCTAATCGGCTAACCGTTTGAGAAAAATCCCAGCTTTCTCCTGTGCC AACATCCTCACCACCCAGTAGTTGGTCCTCACCACCCAGTAGTTGGTCTC TCATGCTGTACGGGTTTCTCCAGGAGGTAACGTGCGTCCTATGATAACGC CGATATTAACCGGCACTCCTTAATTCAGTCTTCTTTTTGCCAACTGATTC TGGAGGTGGCAGGCTATAGTGCGCAGAATCTAAGCGGTCGGAGGCAGACC TCTAGCGTAAGTCAGATATCTTTAAGTTTCCCAATGAAAGTTAAATCACA GCAAGGGGTCAAAGTCGATTCCGACAACGCCTCACGAGAGCTGTAATTTT GATCGCGAAGGACGCGAGAAACGCAGCCGAAACTTACGGCCGCCTTGATT GCCAAAACCGTCGATTCTCGCGGGTCCACCGCCTACGGTAACCGCTTTTG CCTCAACTCAGCCGGTGGACATCAGCGATTTCGAGGACCTCCATGCTTTT CCAATCAAGACGCCAGACTCGATGGCCGACTTCGACGATAATGACGCTTT CGCCAGGCAGCGGCTGCAGGGTGCGCTACATGGCATGATCCGGTTGAAGT TTTCGCGCGTCTGCGAGACTTGTGTGTGTGTCTATGTGTGTGTCTTATGT CTGTGTCTGTGTCTGTGCTTCTGTGTGTTTCTGTGTGTTTCTGTGTGTGT CTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGT TTGTGTCTGTGTCTGTGTCTGTGTCTGCGTCTGTGTGGTGTGGTGTGGTG TGGTGTGTGAGTGTGAGTGTGAGTGTGTGTGAGTCCAAGTTGTCGAAACC CAATCGTGGGGGTTGTCTTGGTCGGTCGGCCCATCCGTCGAAATCTGTAT TGCTGTTGAAACTGTCATTTGTTTTTTTTGTTGGTGGTGTAGAAGAGCTC GGATTATCTTGTCTTGCAGCCGGCGGCACGCCGCTCGGGTTGTGCCGGGT CTTCTTGCTCAATTGTGCTATAGCTGCACCCATCGCGGCGGTCGAAAACG TGTCCGCCACTTGATGCGATCTTCCATCACTTTATTGTCTCCCGTCGTTT CCCGCTAACAACTACCGCATTTCGACGGTGTTTCGCTCGTGTGTATTTGA TTCTGCTGCTGCTGCTGCTGCTGCTGCTGTTTCGTGCTGTATCACATGCA CAATCATTGCACACGACCATCGATCGATCTTCTCCAAAGGGGCGAACTGC GTCGTGATCGAAAAGTGCTCCGCCGCCACACGGGAGAAGCTCGTGATTTT GGACACCGACCCCGCCTACAAGGTTTGCCACTACCTCTGTGTACGTAGAC TCCGTGCATACATAAAACCACATCATGCCCTCCACCTGATGCTGCTTGAC GTCTTTCTATCCGAGAAACGGCACTTCCTATGCCTCAGGTGTGTAGGTGC ATGGGAGTTTCCATGCCGTTCGCCGTATAACGGTTTGACAGAGCAGCGGC ACAGGTCGTGTATGTAACGGGGACAAGCTGTCGTGTCACGCACATATTTC GACCAAAAACCGCTCAATTGCGATCTACAATCATATCCTCGGTGCTTGCT CAGCCAGTAGGTTTAAGGTCAGGATGCATGTGGGCGTTCCGTTGGATATG TTTTGATTGCTGTGTTTTTCGATTTTTGCTGCCTTTTTGTGGTGGTTTTG GTCTATCTCTTGCTTCACGACCATCAGGGGCTGAAGGATAAGGTGGACTC TTTGATGGAAGCTGGAAAACTCTTCGTTGTCGACCATGATATGCTCAAGG TGAGACGGCGCAAACGGAACCCTTGCAGAACTCGCACGCGGCTCTAACCC GAACCCTTTCAGCAGCCGTCAGTTGTGTGTTCAATCCAAGTGCAATACAT TTTGCTCCCAATGCCCACCTCAAGCTGTCCCTCTCTGTACGAATTCCAAG CCCTTTTGTCACGAAACCGTCAGGCAGCGCTGCAGCGACTTAAGCCTTCA TCATCGTGAGTGAGAGAAACCGCTGAAAGCACCACTCGAAGCGGCCGCCC CCTTACCTTTACCTCTCATGAGGTACAGCACCGCCGCGGCTTCGTACCAC TTGCTTCGTTAGACTTTATGGCCGCGTCTTTTGGCAACGCTCGGAGGGTG TCCACTTGACAAACGAGTCCTAGGGCTCAGCCAGCAGCAGAATAATATGT CCACGTTTGCTTGTCGGTGATCCGGTCGTTCTTCGGCGTGCTGCTCTCGG TTCAGGGTCTCGAGTCCTCCCCGCTTGACGGCATCGTTCGATACCTGGCA CCCAGCGTGGCTCTGTTCGAGGCTGTGGACGACGAGCTTCTCCCCCTCAA GCCCATCGGCATACAGGTAACCACTGGAACCATCAACCACGTATACATTC ATACCAGTTGCTCGGGTATACCAATTACTCATGCAGTAAGCCTACGTGCT ATATCAAGTGACCCTTATCGTACAGCGTCATCTACAAGAACTTTCACAGC TACCAGTACATCAAACCTGTGTTGACTTGATTTTTCCGGCACTATTTCCG AGTGAACGTTGTGCGCACTGTTCCGTGGAATTTCGTATCTGCCTGCGAGT GGATTGTGCCGCCCGTTTCGACACGGCGAGCTACGAACACTTGCTTCGTT TCGACAAGACATGCAAGAGAGCAGCGGCGTCGTGTAGGAGGCCAATCCGG CGGTAGCTGAGGAACAGCTTTAATACGGCGGGGGGCACCCGCGTGGTCCG GCGCGGCACAGCGTGCCTACTGTACCAGTCGACCATTTCACCGACGGCGT CTGCTGATTCTGTCGGGGTTAGATAGCAGCCATGATGCCGTATCGATGGT TTCTCATTTCTCACCCCTTCCCCTCCCCCGTGTACTTGTGTCCTCTCCTC ATGGTACCGCACGCGTTCACTCAATTTTTGCAGCTGAGCCAGGGAGAGGC GGCGACGCCAATATTTACCCCGGAAGACGGGTACAACTGGAAGATCGCAA AGGCCTGCTTCGAGGCGGCTGACTTCATGTGAGCCAAATCATACTGTAGC GTCACGTCGCTGCTGCTACTGCTGTGTGTGTATGTCGTTGTGTGTGTGAG TGTGATGTATCGTCGTGCCCTCTATTGTGGATGCCACTCTACGGCCCCTA AGGGATGATAGTAGGCATACGCTTCAGCCGGGGTCACACAGGAGGAAGGA AGTCGACACAGGAGCTTTTTTTGGTTTTGCTCTCCACTTCTCACTGCGGT GCTTTTTTGTTATTTTATGGCGATAAAGGGCTCAGCACTGTACCGTACGG AGTTTGAGTGAGCCAGGGTTGGGCCATTGCTTGCGCGCAGCGCAACTCCG GTTTCGTTTTTTTTTGTTGAGTATTACAGCAGCATGTCGGCAAGTAGCCC GCAAAGGGTGGTGCTGACACGGGATCAGAAACAGACGACGGGCTCACCTC ACGACGACGTTTTCTTTTACGTCGGACTGCCGTTGCGATCCGCAGATGTC ATACGACGTGTCAAGTTTGGGTCGGGGCTAAAAAATATTCTCGCACTTAG ATCTCAAACGCTGAGCTATCCCTTTCGTACGGAAGGTAGGACATAGAGTA GAGTGGACTTCATGTTCACGTGCACTTCTCGACGTAACGCCGAAAGTTTT AAGGTAAGATTTAGTTGTAATTTGAGCCTGTTTTTTCTCAAAGAAATGTT TAGTGAGAGCGCATTGTGACTTGAAACAGAACGTATCTCCTCATCCTTCC CGATCGACCCCCGGCCGCGCGCGCGAACGTCGCAGCATTCACGAGGCTGT GTCTCACCTGAGTTACACTCACGTTGTCCTGGAGGCGCCCATGGTCAGCA TGAACCGCCAGCTGCCCGAGGAGCACCCCATCCATGCCCTCTTCGCACCC CACGTGGAGGGCACCGCCTTCATCAACTGGGGAGCACATGAGGTGAGGCA TACAGCATACAATACCTTGCCTGGTCCGTGATACTCCGAACGAAGATCAC GATGAAAAGTACTGAAGAATGATGTACCCACCCGTACTGCCTTTCGGCAT TTGGGAGTTGTTGTCGCCATGCAGTACCTTTTTTTTCTTTTCTCCTAACA CGATATGTGCCTGGCTTGTGACCGCGGGCTAGACTGCGGTGGTAATGAGC TAATGTCAGAATCAACACCAACAACTATTGTACCACGGGTGCACTATCAA GTCGGCTGTTGATTACGATATACAAATGCGTACGTATGACACAATGTCCA GCAAATCGTTTTTTTTTGCGTTCATGGCTGCAAAACGCCGCTGCGGTTTG AAGTCCATGGGTTGTTCAATCGGCCGCAAACCGGAACAACTCTGGAAAGA AACAGCGGCCGTAGAATGAACTGGCCGCTGGGCTGTCATTCATCGTGGCC GGCTTTCTGCGTTATAGCCACAGCACGATGACAAAACTGAGATAGTTTGC GTCTTTTTTCTGCCGTCTGCTCTCCCCATCCCTTGCCGTGTGTGCGCTTG CGACAGCTATTGATGCCCGTGGATGAAGCAGTGGACAGACTCCTGGCAAA CAAGATTGAAGATGCGTGGACTTTGGTCCGCGAAAAGGCAAATGAATGTT GTTCCACGTCGTGATTTCAGTACAGTATATTGTACTCGACGCTTCAGCGG CGGGGTTTGCTCGGGCTTGAGCCATCATGTGGGTATCTCTGCGCCGGCGT GCCGCGGTAAGCGCTTGCATATCCCTCCCGATGGGTTAGAGCTACGGTCA GTGTTGAGGCTTATGAGCAGGTTTGACAATGAGACCCCTGCTCTGTTGAT GATGTCATCCCAAAGGAGAGCGAGATATTACATGAGACATGCATGCCTTC CGTGTAAATATGATACGGCCACCCGACCCACCCGACCCACTTCTCTATTC GCCCGCGTGTGAAACCATACCTGGTTTCCATACCCGTGCCCATGTGTCCA TGTCCAGCATTCGTTTCCATACCCATGTCCATCGATAGCCATATCCGTTT CCACACCTACATCCATATCCATAGTCAAATCAATTTTCATATCCATATCC GTATCCACACCGATATATCCACAACCATATGTATCTACACCGGTATCCAT ATCCAGTATCTTACCTAAATCCGTATCCATATTTCTGCTACTTTCTCATA TCCCCGCATGGATGTGAAGAGGGTGTCCGAAATTGTGTATTCTCTTGTGC TGGAAATATTCTGCACCGGCCGGTGTTACATATCGCATGTGTTGCACTTA TCGCATGTTTCTACCACCCTCTTGCTCTTGTTTGAATTTTATCTCACGTG GGTTTCCAGAGCCTGGAGCGCATGTCGAAGGACTTCTCGCCGGAGACTGA TCTCGCTTCTCGCGGCATGACCACGGCTGATTTCCCGGGACGGTACCCGT ACCGCGACGTCGGACTAAAGTACTGGGATGCGACTCACACCTGGGTCAAG GAATACCTCAATGTGAGAGTCAAAACTGTAGGGTTATTTTGGGACACATA TGGTCGTATCATATTTATGCCTCTATCTTTCGGTGGAGATTACCTCGAAG GTTCCGCATTTTTGCTCAAAGCGACAAGCGCAGTCAATCTAGAGGACCGG AACTAGAGCCAGGTCTACCCCCCCCCCCCGACCTTACAAAAATAGACTTC TCGGCATTTGCTTCAAATTATTCCGTAAAATGGGTTCGGTAAAGACGATT GTTGCGCTGGTGCTGGCTAAGGTTTCTTATGGTGTTTTACGTTGCCGTTG AGCTCATTTGCCTGAGGTGTGTGCGGCGTGTACATCATGGTGGGCGACTC ACGACGAGTTACCAACAGCCCAACGTGAGTATTTGCAGGTTCTTCAACAA CCAAGCATTCGGCCATTCACATATTCTTGCACCAGCACCGCACTAATTCC AAGTACATTTGACGGTGTGTTTCGACCAATCAGGTGTACTACAGCACCGA AGATGACGTCACCGGCGATTACGAGCTCCAGGTACAGCAGTTCAAGAGAG TTTTGAGGAAATTTCACAGAATTTTCGAATGACGCGAGATTTGTGGGTGG ACCTGTAGGTGCGGTGGCCTGTGTCAGCGGTGGATTTATCTGAGAGGCTC TTTTCGTCTTCGGCCTCTGGCAGTTGCAATGGATAGGTAGACTTGTTTCG GTTGGATATCTGTCGATCGTCTAGTTTGAACGCTCACCTTTGCTCTGTTT TTTTATTCGTTGAAAAATCCAGGTTTGGTTGTCGGTGGCGACACGATCGA GGTTAGGGACTGTTGGGGCTTCCTCTTGAAAGGGACTCGTTGTTCATGAT TGTCCATGGTCAAGTCACCTTAAATCAAGTAACAATTGAGGATGTCCCCC GCCTCCGCCGTTGCATCCCCGCAACCCCCTCCCAGGCGTTTGTTGATGAA GTAGTCAACATCGGAGAGCTGAGGTGGCTGGAGGAATGGAAGGACTCGAA GGACAAGCTCGGTCTCCTCGCCAAGGTAGTGTGCATTTCGGTTAGTCTCT GCACATTTGTTTTTGCAGCACATCTCACTTGTTTCGCGGGCTGGGATGTT CCGTGCACCTCGTGAGCCTGGCGAGCGTGTGTGATGCCGCCGTGCAGTAG CGCGATCTACTCTGTTATCACCGTGCAGTAGAGCGCCACACTTCTCGCGG CCAACACGGTCATTTGCTGCATTCTGTTCCATGTCATCAAACACCCTCGG CGTTCGTATGTTGCATTGTTTATATCCCAGGTGCTAGCGAGCCTCATCTA TTCTGCAAGCACCCTGCACGCCGCCGTCAACTTCCCTCAGAAGCCCCTCA TGTCCTACGCGCCCAACAACCCCGGTTCGGTGTACATGCCCCCTCCCACC GACAAGGTAAGCCAACGAAGGTCATGTGTCAAGCGTGACGAGAGATACCA CCCCCCCCCTCCCATTGATTGGAGTGAGCAAGCAAGGCCAGCTTGCCAGC AGGGAAGATGGGTACTTCGTACGAATATACGTTTGTTTGTTTTTCTTGCG TGCGCCCTTTCGACGCACTATTCGTACAAAAGAAGCAGAATTCGTTTTCC TTACCTTGAGAATTAGGGATTAGGGTAGGAGAAGATCTACTTGTTAGGAT ACATTTCTCACTTCGAAGTATTTGATTTTTTTAACATAGTATTGGAGAAG ATACACTTGTTAGGTTAGGCTAATTGGTAGGATGCGAGTAGAGAATAGGT TTGAATATGAAAAAGGTTTCTTAGAGGGCGCGTGCTGCAATTTTTAACCC AGTGCTTTTTCTTCCTTCTCTCCCTTGTCGCTTGGCGGACGACTACTGTA TTACGACCATCATTGCGTGCTGCACTGTTACTACCCAGTAATTTTTCTGC CGTCTCTCTGGTATGTATCACTTGACGAACGACCGTCACGATCGTCACAC GGAAGAGAGAGTACCAAAATTAGCTTGCAAAGATGACCTGAGATACCCAC GTCGTCGAGGATCTCCACGTAACAGATCGATGGTCGACACGACGCTGAAG CACCGCCAAAACAGCAAGGCGAATGAGATGGTTACGTATGATAAGACAGG CACACAAATATTTACCAATATGTATGATATGCGGAAGGCACAATAAACCT TTGTGAAAAAATGTACCAGGTATCATACAAACATTTACAGGAATTGTAAC AGGCACCTTGCTGCCGGTCGTGACTCTCCGCCGATGACAGGCGAAGCGGG GCTTCGAGGACTACCTGGCCTACCTTCCGCCCCTCGAGGTTGCCACGGAG CAGGTCGTCGCCCTCTCCCTTCTCGGATCCGTCTTCCACACCAAGTGAGT CATGAGACGTTCTTGTACGCGTTGGCGTGTTGGCACTCCTATGGCCGTCG GGCGCGACCACCTCACACACATACACACACACACACACTTGTTTTGTGCG ATTCGCGGTCCATCATTTGTTCCAACAAAGTACAGGAGTACAGTGGAGTA AATACAAATTCACACGAATTTTTCTTTTCAAAAAACAAACATACGAAGTA TATCAAGTGTGTGTGTGTGGGGGGGGGGGGCGAGGCTGGGTTTTTTGTAT AGTTTTGTTTTCAACTCGGAGCGGTCCCCTGTTGGACGTGTGCTGGTCCG ACTCGGGAGCCACGATAAGCGAATCCCGCTCTGTCTACAAGTCTCGGCGA TGAACGCGCTAACACACACCATCTGGGTTTTCCACCGCGGTGGCATTGTT TTCCTCGCGCCGCTCTTGGTTGACTCGCAAGGCTGGGCGCCTACGAGGCG AACCACTTCAGCGACACGCGAGTGCTGGCTGCCTTGGCGAGGTTCCAGCA AGCCATCGAGGAAATCGAGATTGACATCGTAGACGAGTGAGTTTTCTCTC GCATAATCGACACGAACGAATATCATGGCACATCGCACGCAGAAGTGCCA AAATATTGTCGTTTGAAGCCCTGGAAGACTCTCCTTTTTGGCTGTAGAAT GTTCCAGGGTTAAAACGTCGGCTACACGGGAGCCGATAGTGAACCTCCCA ACCACGCTTTGGTACGTGTCACCACCATAGACAAAGACTGTGACAGAAGA CTTGCGTACGTGCGGGTAGCTTTAGTACCAGTTAGCTTGCGTGGTGATGT TTTACCCGTGGTTGCCCCTCCACTCCGCCACGCGCACACCGTGTTGATCA CCCCCCATCCGCGTCCGCCTGCTGTTTAGGAACGCCTACGTTGTATCCAC CTGGCGCACGAGGGGCAAGGACAAGAAAGATGCCGCCAATTTCGGGTACA CCACGCTCCTTCCCGACAACATCCCGCAGTCTATCAACATCTGATCTAGC CGCAGCAAGGAGAGTTGGTGTGGTCAAAGCTGCTTGTCTTCGGCCAACAT ATGATATGCTGCTGTTTTCCTGACATCCCTTCACTTTTCGACTTGAAAAG TTGGCGTGTCGTTCGCTTCCGCTGTTGGATACGAAGCCTACACCTGCGAC ACCCGTGTTTGATGCGGGTGCCACGCATCCGATTGTACACAAAAATCTGC CTTGTATGTCGAACTTTACACTCGTACACGGGTCTCAGCAGTCATCCAGG TTGGAATATGACAAACGTAGCACGTGTGATTCCGTGCATGTGTTTTCTGT TGAGTAGTAGAGGACAAGCACATCGGTTGTTGGCCCGGGGAGTCGCGCAG GTTGCATGGTACATCTGATTGTTCACCGTCCTTGTTGTTGCGGATAACAA ACAAATTGTGGGCGTGAGCGACCACCCGCGTTGTTTAGTACATCTGATTT GAGATCTGTCTGACGTGGTTTTGAAGTACACGAGAGGCGCGCAAGAATTT CCACCAACCCTGGCGGAAAAGTAAAGGTGGTGTAATAAGCAAAGGTTGCG CCAACATTGGCACTATCGCCAAGGTAAACGACGTCTTTGTCTTGCCATTC CGCAGCTGTGCGCATAGAGAAAAACATTAATAGTTGTACAGTAGACCCTA TACTTCGAAGTAGATGTACAGCCTCACCATGAGACGTTGCTGGTTGTAGC GTACTCCATGGTACTTGATGTTGTAAAGGAGGGCTAGCGGTGATGTTCAA GGTATTGTTGGCCCGAAAACGTTTCGTGTGCGTGGTGTGCGTTGTGAGTA AAAAAGCCAGAGCTGCATTTCCGTACGAAGAGCTTTTTGGCGTAACCTAA AATTGGCGTAGCCTAAAATTGGCGTAGCCTAAAAAACGCACCAGGCACGA GTGAAAATATGTGTTCTGTACTGTACCGGCGAGCGTTTTCTATTTCTCCC GTACTTGTGATGATTTGACATGGACTGTTTGCCTTTGAAGGGATGTCGCC GCGGTGTCGCATCGTAGTCTTAAATTGTTGTACTTCTACATACATATGAT AATACATGTTCGTCTTTATATTGCAAGTACATGTGATAATTCGAAGTAGT TCGAAGGCGCTGTGCGTTGTAAAATTGCAGCAGAACGACGGTGCTGCTTG GGCAGTGCTTCGTGAAGTGAATATGCCTCTACCCGGCTCCATCAAAGTTA CTTCGACGTCTCGAGGCCTTTTTAGGGTTTCCCGAAGCGACGCTTGCGTG TTGCGTGTGTCGTTTCCCACGTTTTCTGGGCGCTAGCCTACCCTTTCGGT GTGTGTCTACGTGCAATAGCCGAGGCCTCAACAGGAGATATAATCGTTTC CGGGTGTAATATATTGCAGTTGGACCAGCGCAGTCTGTTTTGGACATGAT TCCGAATCGAGCCGAAAGGCTTTTGAAGCCGAGGGAAAGTATTCAAAAAT ATTTTTCCCGAAGCAACGCGTTTTCTTGCGACTTTCCATTAGAAAGCGAT GTATTCGTGAGTATATAGAGAGAAGGGGTTGCTGAACCCGACTCGCATTA AAAGCCTAGGGCAAGTACCGCGCAGGAGGAAACGTGTGAGCAATGAAAAA AAAGCTCGTCTGTGCCTTCCTTCTGTGTGACCCCGGCTGATGCACCCACT TCATATCGAAAGGTGTACTGTAACACCGTGCCCAGAATATATGGGATGAA GGAACACAACGCGTTGTCTGTTAATTAATGTATTATGTGAACTTGTTTCC CATTTTCCATACTGCCAGCCTACCCTTTCGATTTTTGAATGTGCATCAAC CGGGACCTCAATAGGAGTTATTTTTTCGTTTTTCGTGTGTTTTTATTGCA GTTGAGTGCCAGCGCAGTCTGTTGTGCACATGATTCCAAATTGAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig181:193789..210333+

>mRNA_P-littoralis_Contig181.33.10 ID=mRNA_P-littoralis_Contig181.33.10|Name=mRNA_P-littoralis_Contig181.33.10|organism=Pylaiella littoralis U1_48|type=CDS|length=2289bp|location=Sequence derived from alignment at P-littoralis_Contig181:193789..210333+ (Pylaiella littoralis U1_48)
ATGTACCGGTTCTTGTCTTATGCCCTGCTGCTGCCGCTGCTGCTGTACGA
TATACGTATCGTTTCGAGTGTCTGTTGTAGGGATGAGATCAGGTGCTGTG
CGTGTATGGGTGTCATGATCCCATCTATCATGGGCGCTAGGCAGCAGCCT
CCCACTCCATTCGACATACATCTGGTGCAGCAGCCGGGGATCACGGTCAC
AGATAGATCAGATCATCAGCAGGAGGGAAGATCAACGAACATAATACATG
TGGCTCGCCCAAGGTCGATGAGAGGAACTGCGGCGGCCTCAACGTTGCTG
CTGGCGTTCTGCGGAATGCAAGGCGGAATGCTGGCTCGAGCGGCTGAGGA
GGCGGGTAGCTGCTCCGTGGATGCAGCAGGGGGGGGGTCGTGCCAGACCC
CAGTGGTGACGGAGAGAGCGAGCGCTGAGGCTGTTCCTGCAGGTGGAATA
TTCGGGAGATTGTTCAGCTTCTTCAGCAGGGAGTCTGAAGAGGAGGAGAC
TTGTCTGCCTCAGGACCCGAAGGCGAACGCTGTTAGCCGCAAGAAACAGC
TGGCCGCGAAGCAGAAGAACTACACCTGGAGGATGGGGGGCACCCCCATC
GACATGCCCTTTCTCGACGGGTTCCCTCCGAAAGACGAACTCCCCAGCAT
CACGTGGACCGGCAAGCTAGTCGCCTCCCTCGTGCGGATCACTCTGGGCT
CCACAAGGGGAACAATCGGTGTCGGAGAGATCATCGAGGCCTTGTCGGAC
CCCGTCAGGGCCAAGAATTTCGGGCCCAGGCTCAAAAGGATCATCACCGA
CGCAAAGGGACAAGAGAGGCCGGTGGACATCAGCGATTTCGAGGACCTCC
ATGCTTTTCCAATCAAGACGCCAGACTCGATGGCCGACTTCGACGATAAT
GACGCTTTCGCCAGGCAGCGGCTGCAGGGGGCGAACTGCGTCGTGATCGA
AAAGTGCTCCGCCGCCACACGGGAGAAGCTCGTGATTTTGGACACCGACC
CCGCCTACAAGGGGCTGAAGGATAAGGTGGACTCTTTGATGGAAGCTGGA
AAACTCTTCGTTGTCGACCATGATATGCTCAAGGGTCTCGAGTCCTCCCC
GCTTGACGGCATCGTTCGATACCTGGCACCCAGCGTGGCTCTGTTCGAGG
CTGTGGACGACGAGCTTCTCCCCCTCAAGCCCATCGGCATACAGCTGAGC
CAGGGAGAGGCGGCGACGCCAATATTTACCCCGGAAGACGGGTACAACTG
GAAGATCGCAAAGGCCTGCTTCGAGGCGGCTGACTTCATCATTCACGAGG
CTGTGTCTCACCTGAGTTACACTCACGTTGTCCTGGAGGCGCCCATGGTC
AGCATGAACCGCCAGCTGCCCGAGGAGCACCCCATCCATGCCCTCTTCGC
ACCCCACGTGGAGGGCACCGCCTTCATCAACTGGGGAGCACATGAGCTAT
TGATGCCCGTGGATGAAGCAGTGGACAGACTCCTGGCAAACAAGATTGAA
GATGCGTGGACTTTGGTCCGCGAAAAGGCAAATGAATGTTGTTCCACCCT
GGAGCGCATGTCGAAGGACTTCTCGCCGGAGACTGATCTCGCTTCTCGCG
GCATGACCACGGCTGATTTCCCGGGACGGTACCCGTACCGCGACGTCGGA
CTAAAGTACTGGGATGCGACTCACACCTGGGTCAAGGAATACCTCAATGT
GTACTACAGCACCGAAGATGACGTCACCGGCGATTACGAGCTCCAGGCGT
TTGTTGATGAAGTAGTCAACATCGGAGAGCTGAGGTGGCTGGAGGAATGG
AAGGACTCGAAGGACAAGCTCGGTCTCCTCGCCAAGGTAGTGCTAGCGAG
CCTCATCTATTCTGCAAGCACCCTGCACGCCGCCGTCAACTTCCCTCAGA
AGCCCCTCATGTCCTACGCGCCCAACAACCCCGGTTCGGTGTACATGCCC
CCTCCCACCGACAAGGCGAAGCGGGGCTTCGAGGACTACCTGGCCTACCT
TCCGCCCCTCGAGGTTGCCACGGAGCAGGTCGTCGCCCTCTCCCTTCTCG
GATCCGTCTTCCACACCAAGCTGGGCGCCTACGAGGCGAACCACTTCAGC
GACACGCGAGTGCTGGCTGCCTTGGCGAGGTTCCAGCAAGCCATCGAGGA
AATCGAGATTGACATCGTAGACGAGAACGCCTACGTTGTATCCACCTGGC
GCACGAGGGGCAAGGACAAGAAAGATGCCGCCAATTTCGGGTACACCACG
CTCCTTCCCGACAACATCCCGCAGTCTATCAACATCTGA
back to top