prot_P-littoralis_Contig180.118.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig180.118.4
Unique Nameprot_P-littoralis_Contig180.118.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length745
Homology
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 520 bits (1339), Expect = 4.010e-171
Identity = 325/580 (56.03%), Postives = 370/580 (63.79%), Query Frame = 0
Query:  102 DGGAAPKSKKRKQSPTSTESKPPTKNADGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRLGQNGSHSKPTPNYCCATAAARSQGGSSRRPSGRQTPMRQIQQPHGQTPKQVF-SPSELGCSLPLDGGLGAPPWTPSQMPSERHP-PALASHRTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETNRNVGVRMEHLLSRDVQGGRVAAFAGGAAGALLVSQGFGGAGGA---VRHGITKFSLADLRHHKNIYLHREQVRDVKFSSNGGGSVGYVLSTSFDRTLKVCDPRTDSVVVAYGLDGNGWSCQWSATNPTQMFCGLVDGTRTAAVQLFDLRSTARAVGKLRAAASQRQPVHSICHTANDLLFCATMGGVWAWSGGTKGDVGVGERQEGRCGKENMAERLQIQAGACCSLSQVTNHNXXXXSHG----SSGDVDRHPRFLVSTRGSSASHVVFGL 672
            DG A  K KKRK++ T +    P   ADGE CSICLD WTS GKHRIC LLCGHLFGQSCIERWLKE+RSCP+CGAKVG K + RIIPLFLQNL+A+DTGEL+  R LLEEEKRLRKQCEAERVR+SI NASLKD+LSRL Q G+          +++ ARSQ   S    G   P+R + Q    TP +     S +  S  +D G  +     +  P   HP PA A  R  T                                                                           V VR E LLSRDV  GRVAAFAGGAAGAL+VSQ  G AGG+   +RHG+TKFSLADLRH+K+I+LHREQ+RDVKFS++GG SVGY+LSTSFD+TLKVCD RTDSVVV Y L+G+GWSCQWS+T PTQMFCG+VDGTRT+AVQLFDLRSTA AV KLRAAASQRQP+HSICHTA+D+L CATMGGVWAW GGTK     G   E    +E  AE+LQIQAGACCSLSQ         SHG    SS DVD+ P FLVSTRGSSASH VF L
Sbjct:   91 DGDACDKLKKRKRNSTGSSRGAPE--ADGERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGAKGTNRIIPLFLQNLVAQDTGELETARTLLEEEKRLRKQCEAERVRVSIENASLKDRLSRLNQGGAG-------VVSSSVARSQESVST--PGCPKPIRTLSQ--FATPGRAGPGVSSVAYSSSVDIGSSS---FMTPCPKISHPGPAAAYSRFKTPPPRRPIGNLDVGAGGGSGGRGLAATESGSEGAA-------------------------------------AGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQLRDVKFSADGG-SVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTTPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTK----EGGGSEAWDPEELAAEKLQIQAGACCSLSQ---------SHGTAASSSSDVDQQP-FLVSTRGSSASHAVFRL 602          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 2.980e-169
Identity = 313/554 (56.50%), Postives = 358/554 (64.62%), Query Frame = 0
Query:  129 DGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRLGQNGSHSKPTPNYCCATAAARSQGGSSRR--PSGRQTPMRQIQQPHGQTPKQVFSPSELGCSLPLDGGLGAPPWTPSQMPSERHP-PALASHRTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETNRNVGVRMEHLLSRDVQGGRVAAFAGGAAGALLVSQGFGGAGGA---VRHGITKFSLADLRHHKNIYLHREQVRDVKFSSNGGGSVGYVLSTSFDRTLKVCDPRTDSVVVAYGLDGNGWSCQWSATNPTQMFCGLVDGTRTAAVQLFDLRSTARAVGKLRAAASQRQPVHSICHTANDLLFCATMGGVWAWSGGTKGDVGVGERQEGRCGKENMAERLQIQAGACCSLSQVTNHNXXXXSHG----SSGDVDRHPRFLVSTRGSSASHVVFGL 672
            DGE CSICLD WTS GKHRIC LLCGHLFGQSCIERWLKE+RSCP+CG KVG K + RIIPLFL NL+A+DTGEL+  R LLEEEKRLRKQCEAERVR+SI NASLKD+LSRL Q G+          ++  ARSQG  S    P  ++T + Q+  P G  P      S +  S  +D G  +     +  P   H  PA+A  +  T                                                                           V VR E LLSRDV  GRVAAFAGGAAGAL+VSQ  G AGG+   +RHG+TKFSLADLRH+K+I+LHREQVRDVKFS++GG SVGY+LSTSFD+TLKVCD RTDSVVV Y L+G+GWSCQWS+T PTQMFCG+VDGTRT+AVQLFDLRSTA AV KLRAAASQRQP+HSICHTA+D+L CATMGGVWAW GGTK + GV E  +    +E  AE+LQIQAGACCSLSQ         SHG    SS DVD+ P FLVSTRGSSASH VF L
Sbjct:   41 DGERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGTKVGAKGTNRIIPLFLHNLVAQDTGELETARTLLEEEKRLRKQCEAERVRVSIENASLKDRLSRLDQGGAG-------VVSSIVARSQGSVSTPGCPKPKRT-LSQLATPGGAGP----GVSSVAYSSSVDIGSNS---FMTPCPKISHSGPAVAYPQFKTPPPRRPIGNLDVGAGGGSGGWGLAATESGSEGAA-------------------------------------VGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQVRDVKFSADGG-SVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTAPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTK-EGGVSEAWDR---EEQAAEKLQIQAGACCSLSQ---------SHGTAAASSSDVDQQP-FLVSTRGSSASHTVFRL 527          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: L8GV33_ACACA (Zinc finger, C3HC4 type (RING finger) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV33_ACACA)

HSP 1 Score: 133 bits (334), Expect = 9.930e-29
Identity = 126/483 (26.09%), Postives = 196/483 (40.58%), Query Frame = 0
Query:  133 CSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEE----KRLRKQCEAERVRLSIHNASLKDQLSRLGQNGSHSKPTPNYCCATAAARSQGGSSRRPSGRQTPMRQIQQPHGQTPKQVFSPSELG-CSLPLDGGLGA-----PPWTPS--QMPSERHPPALAS----HRTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETNRNVGVRMEHLLSRDVQGGRVAAFAGGAAGALLVSQGFGGAGGAVRHGITKFSLADLRHHKNIY-LHREQVRDVKFSSNGGGSVGYVLSTSFDRTLKVCDPRTDSVVVAYGLDGNGWSCQWSATNPTQMFCGLVDGTRTAAVQLFDLRSTARAVGKLRAAASQRQPVHSIC----HTANDLLFCATMGGVWAW 594
            C+ICLD+W S+G H+IC+L CGHLFG+SCIE+WL+  + CP C AK        I PLF+Q+LI  D  E     KLL EE    ++L +  +A+  R+ +   + K Q+ +L +     +   N+                    Q P          T + +     LG  S+  D G+ A      P   +  Q P+ R   AL++    H                                                                          +T   + VR   +L    +G             LL S   GG+G + + G+ K SL D  H + I  LH +Q+RD+K    G  S   VL+ S D+TL V   RT+S V  + L+   W+C+W   +P  ++CG+ +     AV ++D+R++  A+ +  +A +Q  P+HS+     H     L  A+ GGV+ +
Sbjct:   37 CTICLDSWQSSGPHKICSLKCGHLFGRSCIEKWLRNNKLCPMCKAKAQRS---HIRPLFVQHLIVVDNTEECRLTKLLAEEAGKREKLVRSYKADMERIHLECIAYKQQVDKLKRELDDERTKFNWSHWNVT--------------QAPSPAAYGDADDTERGLDGHDLLGGLSIRTDAGVCALFSLAQPIKAACYQTPASRSGAALSADLTFHAPSYPYFHHFHFRLHSCSYCHSLFIVPSLLSLRSTSASEILIDEPPISIRADRPKELDSRAPLPLATSQIKRKMDTVHKLSVRRSRVLDISCEGH------------LLASAVTGGSGSSSKWGLVKVSLLDPTHQETIAGLHDKQIRDIKCGVLGSASENLVLTASEDKTLHVVSLRTNSSVQTFTLEAGTWACEWDRNDPNYIYCGVRN-----AVWVYDMRNSTIALPRPTSAVTQ--PIHSLGFLPDHQGRKGLLAASCGGVFCF 483          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A813Y3E3_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813Y3E3_9BILA)

HSP 1 Score: 100 bits (250), Expect = 1.790e-18
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 0
Query:  129 DGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRL 241
            D E+CSICL+ WT++G HR+  L CGHLFG+ CIERWLK    CP+C  +   +  IR I  + + L   DT ELD   K LE+E++LRK+CE E   + +    ++D+LS L
Sbjct:   91 DEETCSICLEPWTNSGIHRLVCLKCGHLFGEGCIERWLKTNPKCPQCN-RPSKRSDIRRI--YARALKVIDTAELDKALKDLEDERQLRKKCEIETSEIKLRFQIVRDELSIL 200          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A851UBM4_9PASS (RFWD3 ligase (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A851UBM4_9PASS)

HSP 1 Score: 99.4 bits (246), Expect = 8.650e-18
Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 0
Query:  124 PTKNADGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLK-EKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRL 241
            P    +G++C+IC + WT+ G+HR+CAL CGHLFG +CIERWLK +   CP+C  K    K   I+ L+ + L A DT E +  R  LE+E+ LR+Q E E  +  +    L D+ S+L
Sbjct:  250 PRDEEEGDTCAICFEQWTNAGEHRLCALRCGHLFGYTCIERWLKGQAGKCPQCNKKA---KRSDIVVLYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRLQLQVLTDECSKL 365          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A2K6G1U0_PROCO (Ring finger and WD repeat domain 3 n=2 Tax=Lemuriformes TaxID=376915 RepID=A0A2K6G1U0_PROCO)

HSP 1 Score: 99.0 bits (245), Expect = 8.960e-18
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   99 CDNDGGAAPKSKKRKQSPTSTESKPPTKNAD---GESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLK-EKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRL 241
            CD+ G   PK    +QSP    S  P+ + D   GE+C+ICL+ WT+ G HR+ AL CGHLFG SCI +WLK + R CP+C  K    K   I+ L+ + L A DT E +  +  L +E+ LRKQ E E  +  +    L D+ ++L
Sbjct:  173 CDSGGKTLPK----QQSPQKPNSLLPSASMDEDEGETCTICLEQWTNAGDHRLAALRCGHLFGYSCISKWLKGQARKCPQCNKKA---KHSDIVVLYARTLRALDTSEQERVKSSLRKEQMLRKQAELESAQCRLQLQVLTDECTKL 312          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A267GDQ9_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GDQ9_9PLAT)

HSP 1 Score: 96.7 bits (239), Expect = 1.160e-17
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 0
Query:  117 TSTESKPPTKNADGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRLGQ 243
            T+  S  P + AD E C+IC + WTS+G+HR+CAL CGHLFG+SC+ERWL+ ++ CP+C       +   ++PL++ NL A D  E +A +  +++ KR +   E E   + +    L+D+  RL +
Sbjct:  232 TTAASSSPPQPAD-EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRRHE---VLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRLSR 354          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: UPI001ED8B8D5 (E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B8D5)

HSP 1 Score: 98.2 bits (243), Expect = 1.930e-17
Identity = 53/140 (37.86%), Postives = 81/140 (57.86%), Query Frame = 0
Query:  106 APKSKKRKQSPTSTESKPPTKNADGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLK----EKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRL 241
            +P+ KKRK+ P + +      ++  ++C IC+D W+++G HR+C L CGH++G+SCI RWL         CP+C +K   +    I PLF ++L A DT E D     LEE KR R++ E E  R ++ N   K Q+ +L
Sbjct:  198 SPRGKKRKKDPENDDPVDSEDDSTSQTCPICMDEWSNSGGHRLCCLKCGHIYGESCIRRWLSTTTLSSGRCPQCNSKAKVRD---IRPLFARSLRAIDTAERDRLAAQLEESKRERERLELEVTRFTMANQMQKAQVEKL 334          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A3M7Q7N5_BRAPC (E3 ubiquitin-ligase RFWD3 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q7N5_BRAPC)

HSP 1 Score: 97.4 bits (241), Expect = 2.340e-17
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0
Query:  131 ESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRLGQ 243
            E+CSICL+ WT++G HR+  L CGHLFG++CIERWLK    CP+C  +    K   I  ++ ++L   DT ELD   K LE EK+LRK+ E E   + +    ++D+LS + Q
Sbjct:   99 ETCSICLEPWTNSGAHRLVCLKCGHLFGEACIERWLKTVPKCPQCNRQ---SKRTDIRRIYAKSLKVIDTAELDKALKDLENEKQLRKKSEIEISEVKLRFQLVRDELSLMQQ 208          
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Match: A0A1I8IIU3_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IIU3_9PLAT)

HSP 1 Score: 96.7 bits (239), Expect = 3.410e-17
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 0
Query:  117 TSTESKPPTKNADGESCSICLDAWTSNGKHRICALLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDTGELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRLGQ 243
            T+  S  P + AD E C+IC + WTS+G+HR+CAL CGHLFG+SC+ERWL+ ++ CP+C       +   ++PL++ NL A D  E +A +  +++ KR +   E E   + +    L+D+  RL +
Sbjct:  232 TTAASSSPPQPAD-EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRRHE---VLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRLSR 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.118.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB60_9PHAE4.010e-17156.03RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LKW0_ECTSI2.980e-16956.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
L8GV33_ACACA9.930e-2926.09Zinc finger, C3HC4 type (RING finger) domain conta... [more]
A0A813Y3E3_9BILA1.790e-1846.02Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A851UBM4_9PASS8.650e-1842.86RFWD3 ligase (Fragment) n=2 Tax=Passeriformes TaxI... [more]
A0A2K6G1U0_PROCO8.960e-1840.82Ring finger and WD repeat domain 3 n=2 Tax=Lemurif... [more]
A0A267GDQ9_9PLAT1.160e-1738.58RING-type domain-containing protein n=1 Tax=Macros... [more]
UPI001ED8B8D51.930e-1737.86E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Isc... [more]
A0A3M7Q7N5_BRAPC2.340e-1744.25E3 ubiquitin-ligase RFWD3 n=1 Tax=Brachionus plica... [more]
A0A1I8IIU3_9PLAT3.410e-1738.58RING-type domain-containing protein n=1 Tax=Macros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 707..721
NoneNo IPR availablePANTHERPTHR16047:SF7E3 UBIQUITIN-PROTEIN LIGASE RFWD3coord: 60..680
NoneNo IPR availableCDDcd16450mRING-C3HGC3_RFWD3coord: 129..175
e-value: 1.05369E-21
score: 86.5613
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 125..186
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 462..505
e-value: 0.21
score: 20.7
coord: 507..551
e-value: 97.0
score: 4.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 133..175
e-value: 4.5E-4
score: 29.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 132..175
e-value: 4.9E-10
score: 39.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 133..175
score: 11.559839
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 458..654
e-value: 4.0E-11
score: 44.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 106..233
e-value: 5.7E-14
score: 53.9
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 60..680
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 455..599

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:434608..442841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.118.4mRNA_P-littoralis_Contig180.118.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig180 434355..442841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig180.118.4 ID=prot_P-littoralis_Contig180.118.4|Name=mRNA_P-littoralis_Contig180.118.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=745bp
MDTSASGFDTAVAVSTRLPGPQFDNIPGEEVVPAVSGVRALRESTNTLIP
AAATAAATTPGPGGAATGESRPWLPQLPGAGQRDGGGRCRPAGDDRSSCD
NDGGAAPKSKKRKQSPTSTESKPPTKNADGESCSICLDAWTSNGKHRICA
LLCGHLFGQSCIERWLKEKRSCPRCGAKVGTKKSIRIIPLFLQNLIAKDT
GELDATRKLLEEEKRLRKQCEAERVRLSIHNASLKDQLSRLGQNGSHSKP
TPNYCCATAAARSQGGSSRRPSGRQTPMRQIQQPHGQTPKQVFSPSELGC
SLPLDGGLGAPPWTPSQMPSERHPPALASHRTGTGAAAAAAEAAEAKAAA
AAVFSQHETPPSRRRQRGRDVEVRTPAGSGSGGGGGGGGGGRRSEEFERA
AAAAETNRNVGVRMEHLLSRDVQGGRVAAFAGGAAGALLVSQGFGGAGGA
VRHGITKFSLADLRHHKNIYLHREQVRDVKFSSNGGGSVGYVLSTSFDRT
LKVCDPRTDSVVVAYGLDGNGWSCQWSATNPTQMFCGLVDGTRTAAVQLF
DLRSTARAVGKLRAAASQRQPVHSICHTANDLLFCATMGGVWAWSGGTKG
DVGVGERQEGRCGKENMAERLQIQAGACCSLSQVTNHNNNNNSHGSSGDV
DRHPRFLVSTRGSSASHVVFGLQGEGEQQEEEEQVPQSAHPAQAPAAAAG
DSGGTEDSAAVSGTEDTAGNTEGTPIFGEGEQGATGSAVVQRGLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR001841Znf_RING
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013083Znf_RING/FYVE/PHD
IPR037381RFWD3
IPR036322WD40_repeat_dom_sf