mRNA_P-littoralis_Contig180.87.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig180.87.4
Unique NamemRNA_P-littoralis_Contig180.87.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A6H5K8A3_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8A3_9PHAE)

HSP 1 Score: 661 bits (1705), Expect = 1.020e-233
Identity = 336/439 (76.54%), Postives = 366/439 (83.37%), Query Frame = 3
Query:  483 ELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRDEGGWIAMDFPAEVVGDPLSDDDESRKAIVQALGIATGGGDA--------LFVGRNRFDVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQ--RGAGEEA-SPAVD--VSAGS-DFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLE-KKEGGDRVILEGKAVTVFRGLFRR 1754
            E+VGFVCGT S GEELSHESMHLHDPNG TLCIHSV VAEKFRRRGYAT MLKAYV NVAL QPGVRRVCLIAKAGLLGMYASCGF+L+GLSPVVHGKDPWFEMR DLDS+EPRLLRFVQVD+FS++ F GNPAAVFFT AGGDADWMQKVA+EMN+SETCFLELQP+TP E +S+GP YALRWFTPGGEVDLCGHATLAAAFALWEEGRV P LP+RFSTASGVLTCRRD  GW+AMDFP+EVV D L +DDE R+AIVQALG+A+ GG          LFVGRNR DV+VEVTPEAF+ + PDMR+LAA E RG IVTCKGQ  + AGEE  S AVD     GS +F SRFFAP +GIDEDPVTGSAHCCLAPYWASKLGR             ++GYQASPRGGTVR T+  K EG  RV+LEGKAV VFRGLFRR
Sbjct:   24 EVVGFVCGTCSQGEELSHESMHLHDPNGQTLCIHSVVVAEKFRRRGYATEMLKAYVENVALTQPGVRRVCLIAKAGLLGMYASCGFTLKGLSPVVHGKDPWFEMRIDLDSSEPRLLRFVQVDAFSDRKFCGNPAAVFFTQAGGDADWMQKVAVEMNISETCFLELQPATPDEASSMGPTYALRWFTPGGEVDLCGHATLAAAFALWEEGRVGPGLPIRFSTASGVLTCRRDAEGWVAMDFPSEVVSDALPEDDEGRRAIVQALGLASAGGGGEGEEGDGVLFVGRNRCDVMVEVTPEAFSAIAPDMRMLAAIESRGFIVTCKGQQLKKAGEEGISAAVDGVTDGGSVEFQSRFFAPRMGIDEDPVTGSAHCCLAPYWASKLGR------------CMVGYQASPRGGTVRTTVGLKSEGDGRVVLEGKAVLVFRGLFRR 450          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A1Q9DHM3_SYMMI (Putative isomerase n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DHM3_SYMMI)

HSP 1 Score: 402 bits (1033), Expect = 6.080e-131
Identity = 234/490 (47.76%), Postives = 297/490 (60.61%), Query Frame = 3
Query:  312 LEVRRLSEENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQ--PGV---RRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRF-STASGVLTCRRDEGGWIAMDFPAEV--VGDPLSDDD-ESRKAIVQALGIATGGGDALFVGRNRFDVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGS--DFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRGLF 1748
            L  RR+ +E+L A   +E ASYP DEAASP+N++ R+  A +FF  A  K+       LVGFVCGT + G  L+HESM  H P G  LC+HSV V +  RR+G A+AML+ Y+  VA     PG    R   LIAKAGL+ +Y + GF L GLSPVVHG DPWFE++             +Q D+F+     GN AAV F+H GGDA WMQKVA+E NL+ET F+EL  S   E       +A+RWFTP  EVDLCGHATL AA ALW  GR      + F S ASG L+C   + GWI MDFPA++  + D   D    +  A+ +ALG++  G D L +GR +FD++ E++P AF  ++PD   LA FE RG  VT +G  G+ + A  A   +AGS  DF SRFF P  GI EDPVTGSAHC L PYW  KLGR   R+N    A  ++G+QASPRGG V+  +    G  RV+L G AVT   G+ 
Sbjct:   47 LAFRRVRKEDLEACASLEAASYPADEAASPENLALRQRVANDFFWGAFEKSNG----SLVGFVCGTCAAGTSLTHESMEKHVPGGELLCVHSVVVQKHLRRKGVASAMLRGYLRAVAALHAAPGSSPPRACALIAKAGLVSLYVNAGFQLVGLSPVVHGADPWFELQVRDIVRTASGEHMIQCDAFAAVPCTGNSAAVVFSHRGGDASWMQKVAMENNLAETAFVELL-SIESESNEEAHRFAIRWFTPTCEVDLCGHATLGAAHALWTTGRASKRRRIDFESKASGTLSCSMTDTGWIQMDFPADMPKMADASVDGSMPTADALGKALGLS--GSDVLAIGRGKFDILCELSPTAFDRIKPDQSALACFECRGVCVTTQGCEGSSD-AERAAAAAAGSVVDFRSRFFGPRAGIPEDPVTGSAHCMLGPYWMQKLGR---RSNGANSAGQVIGFQASPRGGVVKCEVR---GNGRVVLSGPAVTTLEGMM 522          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A812KNM8_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812KNM8_SYMPI)

HSP 1 Score: 376 bits (965), Expect = 1.210e-121
Identity = 224/465 (48.17%), Postives = 270/465 (58.06%), Query Frame = 3
Query:  387 EAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVR------RVC-LIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFST-ASGVLTCRRDEGGWIAMDFPAEVVGDPLSDDDESRKAIVQALGIATG---GGDALFVGRNRFDVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRGLF 1748
            EAASP+N++ R+  A ++F  A  K+       LVGF+CGT + G  L+HESM  H   G  LCIHSVAV  K RRRG A AM++ Y+  VA             R C LIAKAGL+ +Y   GF L GLSPVVHG DPWFE++      E      VQ D+FS     GN AAV F+H  GDA WMQKVA E NL+ET F+EL  ST  E       YALRWFTP  EVDLCGHATL AA ALW  GR      + FST  SG L+C   + GWI MDFPA+V   P   +  S     +ALG A G   G D L  GR +FD++VE++P AF  ++PD   LA FE RG  VT +G  G+  + + A       DF SRFF P  GI EDPVTGSAHC LAPYW  KLGR++        A  ++G+QASPRGG V+  ++   G  RV L G AVT   G  
Sbjct:    8 EAASPENLALRQRVANDYFWGAFEKSDG----SLVGFICGTCAAGTSLTHESMEKHIEGGELLCIHSVAVQLKLRRRGIALAMMREYLRAVASLHAATNGGSSPPRACTLIAKAGLVSLYVQAGFRLIGLSPVVHGADPWFELQVPDIVREACGEPMVQCDAFSAIPCSGNSAAVVFSHRSGDAAWMQKVATENNLAETAFVELLEST-SEPTEEPCRYALRWFTPTCEVDLCGHATLGAAHALWSTGRASKRRRIDFSTKVSGTLSCTLSKSGWIEMDFPADV---PEMANSSSSLPTAEALGKALGLASGSDVLATGRGKFDILVELSPAAFDQIKPDQGALAQFECRGVCVTTQGCGGSDAQRAEAAAGGLVVDFRSRFFGPRAGIPEDPVTGSAHCMLAPYWMQKLGREKDG------AAVVVGFQASPRGGIVKCVVQTAAG--RVTLSGPAVTTLEGTM 456          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A7R9UDB1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDB1_9STRA)

HSP 1 Score: 373 bits (957), Expect = 4.650e-120
Identity = 229/482 (47.51%), Postives = 289/482 (59.96%), Query Frame = 3
Query:  312 LEVRRLSEENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSF--SEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRDEGGWIAMDFPAEVVGDPLSDDDESRKAIVQALGIATGGGDALFVGRNRFDVVVEVTPEAFATLEPDMRLLAAF---EHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRG 1742
            L+ R+L E  + AA  +ETASYP DEAAS D++ FR+A+AGE+F  A   + +     L GFVC T + G+EL+ E+M  H P+G TLCIHSV VA   RR+G ATAML+ Y   VAL  P + R+ LIAKA LL +Y   GF++ G+SPVVHG+DPWF++  +        +  +Q D+F   +K + GNPAAV FTH  GDA WMQ VA+E NLSET FLE       EG      Y LRWFTP  EV LCGHATLAAA ALW+  R +    + F T SG LT RR  G  I +DFP E      +D  E R  + + L +  G  + LFVGRNRFD++VE++ +AFA L+ D   L A    + RG IVT             AV      DF SRFF P  G+ EDPVTGSAHCCL PYW +KLG  +A T        +  +QAS RGG++   ++    GDRV L+GKAVT  RG
Sbjct:   40 LKWRKLRETEVDAAFALETASYPADEAASLDSLQFRQAHAGEYFYGAFDGSEA-----LRGFVCATVAPGDELTQETMAEHHPDGSTLCIHSVVVASDLRRKGVATAMLREYCKAVALGNPRLARIALIAKANLLRLYVKAGFTVNGMSPVVHGRDPWFDLTAECQDFAGEEM--LQADAFIVDDKPYSGNPAAVVFTHRDGDATWMQNVALENNLSETSFLE----RAAEGV-----YDLRWFTPAVEVSLCGHATLAAAHALWDTKR-EAGDTIVFKTQSGELTARRF-GQHIELDFPTEEAEQAATD--EERDHLHRGLRLREG--ELLFVGRNRFDLLVEISADAFARLKEDNVELGAIGQIDCRGVIVT-------------AVGTDENIDFESRFFGPRAGVPEDPVTGSAHCCLGPYWRAKLG-DKAPTK-------MRAFQASKRGGSLLVEVD----GDRVKLQGKAVTSLRG 474          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A7S2RT05_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT05_9STRA)

HSP 1 Score: 360 bits (925), Expect = 3.280e-115
Identity = 229/503 (45.53%), Postives = 286/503 (56.86%), Query Frame = 3
Query:  312 LEVRRLSEENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFL--------EATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRDEGGWIAMDFPAEVVGDPLS-----DDDESRKA------------IVQALGIATGGGDALFVGRNRFDVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGS-DFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRG 1742
            L +RRL+ E++  A  IE  SYP DEAAS + M+ R   AGE F         +  + + S  G  LVGF+ GTR+ G+ L+ ESM  H P G +LCIHSV VAEK+RR G A A L+AY+   A     + R+ LIAK  LL +Y   GF L G S VVHG+DPWFE+   LD    R L FVQVD+F+   FRGNPAAV FT  GGD  WMQ++A+E NL+ET FLE         ++    + LRWFTP  EVDLCGHATLAAA A+W   R   +  +RF T SG L     E GW+ MDFPAE    PL+       +E   A            +  A GI       LFVG+NR D++V VT EAF  L+ +   +AAF  RG IVT         EAS  V   AG+ DF+SRFF P  GI+EDPVTGSAHC LAP+WAS+LG  +           L+ +QAS RGG +R T        RV++ G+A  V +G
Sbjct:   20 LRLRRLALEDVPRAAVIEAESYPADEAASAERMAERCREAGEHFWGVFASPVPQGDVASASFPGAALVGFINGTRAEGDTLTDESMEEHMPEGRSLCIHSVVVAEKYRRCGVARAALQAYMKTQA-QDTRLDRMLLIAKGKLLTLYLGAGFKLVGPSSVVHGQDPWFEL--GLDMCLARQLDFVQVDAFTAVPFRGNPAAVVFTQRGGDEAWMQRIAVEFNLAETAFLE-------HASASDDHFNLRWFTPVAEVDLCGHATLAAAKAVWAT-RQSYSQALRFQTKSGELLVSSSEDGWLHMDFPAEPA-QPLATAEAGSSEEGAPAGAVRLPASTPADLASAFGIPEAS--VLFVGQNRMDLLVHVTVEAFDLLQRNDTAIAAFPVRGVIVTA--------EASNRVPADAGAVDFVSRFFGPRFGINEDPVTGSAHCALAPFWASRLGNNQ-----------LVAWQASDRGGLLRVT--NNAATSRVLISGQATVVMQG 487          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A835ZD42_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD42_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.130e-113
Identity = 236/519 (45.47%), Postives = 280/519 (53.95%), Query Frame = 3
Query:  321 RRLSEENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYA---------------TAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLE-LQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRD------------------------------EGGWIAMDFPAEVVGDPLSDDDESRKAIVQALGIATGGGDALFVGRNRFDVVVEVTPEAFAT-LEPDMRLLAAF--EHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVT 1730
            R L    +  A  +E ASYP DEAAS +  +FR+  AG++F  A     SG    +V  VCGT   G+ L+H++MH HDP G TLCIHSVAVA   R    A               TA L AY+   A  +P V R  LIAK   LG+YA CGF+ RGLS V HG D W EM  +L +  PR L +  VD+F+ +   GN AAVFFTHAGGDA WMQ VA+E+N SET F+E + P    + A+LGP + LRWFTP  EVDLCGHATLAAA ALW+  R   A P+RFST SG+LTCR                                  G I +DFP E    P++D           LG+A    D L+ GRNR D+++EV P AFA  L PD   LAA   EHRG +VT                         R F P  GI EDPVTGSAHCCLA YWA KLGR E           L GYQAS RGGTVR TL + EG  RV+L G+AVT
Sbjct:   29 RPLKASEVDEAHALEVASYPADEAASHEGFTFRQREAGDYFW-AAFDIASGA---IVALVCGTLCNGDTLTHDTMHKHDPAGTTLCIHSVAVAAPRRAAAVALRVXXXXXXXXXXXATAALHAYLRAAAALRPRVARALLIAKPHNLGLYARCGFAPRGLSAVAHGADAWVEMALELSAVAPRALPWALVDAFAARACAGNAAAVFFTHAGGDAAWMQSVAMELNQSETAFVERVVPEDGDDEATLGPLFRLRWFTPAAEVDLCGHATLAAAHALWDTQRAPAAAPIRFSTLSGILTCRHGGSGSDSSXXXXXXXXXXXXXXXXXXXXXXXXSGLITLDFPEEPPR-PIADA-AXXXXXXXXLGLAPA--DLLYFGRNRLDLLLEVPPAAFAQRLAPDFGTLAALPLEHRGVLVT-------------------------RCFFPRFGIPEDPVTGSAHCCLARYWADKLGRDE-----------LTGYQASKRGGTVRMTLRRGEG--RVVLGGRAVT 501          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: W2QBI4_PHYPN (N-acetyltransferase domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QBI4_PHYPN)

HSP 1 Score: 350 bits (899), Expect = 1.420e-111
Identity = 215/487 (44.15%), Postives = 276/487 (56.67%), Query Frame = 3
Query:  333 EENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFT-----HAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGP----EYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRD-----EGGWIAMDFP---AEVVGDPLSDDDESRKAIVQALGIATGGGDALFVGRNRFDVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRG 1742
            E+++     +E ASYP DEAA+   + FR+ NAG FF  A +   +     LVGFV GT +  +EL  ESM  HDP+G  LCIHSV V + FRRRG A  +LK YV  +  +QP V+R+ LI+KA L+G Y  CGFS+  LSPVVHG+DPWFE+   LD  + RL   +QVD+FS + F+GNPAAV        H  G ++WMQ+VAIE NLSET +     + P E +S  P    EY LRWFTPG EV LCGHATL+ AFAL + G V     +RF T SGVL CR +     +  ++ MDFP    E VG  +         +  ALG+       + V +   D++V VTPEAF+TL+PD   LA  + RG  VT +   G G             D  SRFFAPG+G++EDPVTGSAHC L PYWA  L +   +   F             RGG +   L    G  RV+L+G+ V V RG
Sbjct:   15 EDDIRRVAAMEVASYPADEAATESGIRFRQKNAGSFFWVAYLSTDAQESETLVGFVNGTLTARDELDDESMSRHDPHGSLLCIHSVVVDQAFRRRGLAVKILKRYVDIILDSQPQVKRIMLISKAHLVGFYVKCGFSVTRLSPVVHGQDPWFEL--SLDCEKARLPPMIQVDAFSSEPFQGNPAAVVLLSPTAYHKDGVSEWMQRVAIENNLSETAY-----TAPRERSSQTPNDVVEYDLRWFTPGAEVKLCGHATLSTAFALLDAGHVTTNQTLRFHTLSGVLVCRFEVQTETQKLFVLMDFPEQPTEPVGSSVV-----LNELAAALGVQPNA--IVDVKKATTDLLVRVTPEAFSTLKPDFVQLAKTDVRGFAVTAEMPSGNGSNV----------DIQSRFFAPGVGVNEDPVTGSAHCGLGPYWAPILKKTTIKAQQF----------TPVRGGYITLDLVTA-GPGRVLLKGEGVVVLRG 466          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A8K1C3G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3G3_PYTOL)

HSP 1 Score: 347 bits (891), Expect = 1.580e-110
Identity = 220/492 (44.72%), Postives = 285/492 (57.93%), Query Frame = 3
Query:  312 LEVRRLSEE--NLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFT-----HAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLG-PEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRD-EGG--WIAMDFPAEVVGDPLSDDDESRKAIVQALGIATGGGDALFVGRNRF-DVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASP-RGGTVRATLEKKEGGDRVILEGKAVTVFRGLF 1748
            L ++RL+ E  ++   + +E ASYP DEAA+PD + FR+ +AG FF  A +         LVGFV GT +  +EL  E+M  H+P+G TLCIHSV V    RR+G+A AMLK YV  +   +  V+R+ LIAKA L G Y SCGF+   LSPVVHGKDPWFE+  D ++   R L  VQVD+FS +IF GNPAAV        H  G   WM  VA E NLSET +L  +     EG S G  EY LRWFTPG EV LCGHATL++A+ L+EEG +DP+  + F T SGVL C +  E G  WI MDFP   +  P+S D    +    A G+     D +   + +  DV+V+++ E FA +EP+  LL   E RG +VT           S A     G DF SRFF P +GI EDPVTGSAHC LA YW+ +L +            SL  +QA P RGG +  T+ + +  DRV L+G+A+   RG  
Sbjct:    3 LRLQRLTLERHDIERVIALEAASYPADEAATPDMIRFRQQHAGAFFYAAYLAEDENA---LVGFVNGTLTKSQELEEETMSEHEPSGTTLCIHSVVVDAAHRRKGFAGAMLKEYVRIICEQELQVKRIALIAKAYLTGFYISCGFTATRLSPVVHGKDPWFELVLDCEAA--RRLTVVQVDAFSSEIFDGNPAAVVVMPPAQFHKPGVEKWMLSVAKENNLSETAYLARR-----EGGSNGIAEYDLRWFTPGCEVTLCGHATLSSAYVLFEEGHLDPSTTIHFHTLSGVLVCSQQIENGKKWIQMDFPLRDLV-PVSSDISLDEL---ARGLNLVASDIIAAKQTQTSDVLVQISTEKFAAIEPNFDLLGKVEARGIVVT-----------SLAPPNDKGVDFQSRFFGPRVGIPEDPVTGSAHCALAGYWSEQLQKT-----------SLYAHQACPVRGGYISITIPEDKK-DRVYLKGEAIISLRGTL 457          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A8J5I6M3_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5I6M3_9STRA)

HSP 1 Score: 346 bits (888), Expect = 5.710e-110
Identity = 212/480 (44.17%), Postives = 276/480 (57.50%), Query Frame = 3
Query:  333 EENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFT-----HAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTASGVLTCRRD-----EGGWIAMDFPAEVVGDPLSDDDESRKAIVQALGIATGGGDALFVGRNRFDVVVEVTPEAFATLEPDMRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRG 1742
            E+++  AV +E ASYP DEAA+   + FR+ NAG FF  A +         LVGFV GT +  +EL  ESM  HDP+G  LCIHSV V + FRR+G AT MLK YV  +  +QP V+R+ LI+KA L+G Y +CGFS+  LSPVVHG DPW E+   LD  + RL   +QVD+FS + F+GNPAAV        H  G ++WMQ+VAIE NLSET ++ L+  T      +  EY LRWFTPG EV LCGHATL+ AFAL++ GRV  +  + F T SGVL CR +         + MDFP +   +P      + + +  ALGI +     + V R   D++V VTPEAF TL+PD   LA ++ RG  VT        E  +  VD+       SRFFAP  G++EDPVTGSAHC   PYWA  L +   +   F             RGG +   L    G  RV+L+G+ + V RG
Sbjct:   15 EDDIRRAVALEAASYPADEAATESGIRFRQKNAGPFFWVAYLPKDDQESETLVGFVNGTLAAKDELDDESMGHHDPHGSLLCIHSVVVDQAFRRQGLATQMLKRYVDVILDSQPQVKRIMLISKANLVGFYVNCGFSVTRLSPVVHGHDPWLEL--SLDCEKSRLPPLIQVDAFSGEPFQGNPAAVVLLSPAAYHKDGASEWMQRVAIENNLSETAYVSLRERTAQTPNDV-VEYDLRWFTPGMEVKLCGHATLSTAFALYDTGRVTTSQTLHFHTLSGVLVCRFEVQTETHKVLVLMDFPEQPT-EPAGSTVVTNE-LASALGIQSNA--IVDVKRATTDLLVRVTPEAFPTLKPDFVRLAKYDVRGVGVTA-------EALTDTVDIQ------SRFFAPRGGVNEDPVTGSAHCAFGPYWAPMLKKTTIKAQQF----------TPIRGGYITLDLVVA-GPGRVLLKGEGIIVLRG 463          
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Match: A0A7S1A2G4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A2G4_NOCSC)

HSP 1 Score: 344 bits (883), Expect = 6.270e-109
Identity = 217/490 (44.29%), Postives = 282/490 (57.55%), Query Frame = 3
Query:  312 LEVRRLSEENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSGVGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGYATAMLKAYVGNVALNQP---GVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHGKDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADWMQKVAIEMNLSETCFLELQPSTPGEGASLGPE-YALRWFTPGGEVDLCGHATLAAAFALWEEGRVDPALPVRFSTA-SGVLTCRRDEGGWIAMDFPAEVVGDPL-SDDDESRKAIVQALGIATGGGDALFVGRNRF---DVVVEVTPEAFATLEPDMRLLAAFE-HRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFA---PGLGIDEDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRATLEKKEGGDRVILEGKAVTVFRG 1742
            L  R L+  +L  A EIETASYP DEAA+P+ + +R + A E F     +        LVGFV GT + G  L  E+M  H+P G ++CIHSV VA   RR G A AM+KAY+  +  +      VRR+ L+    LLG Y  CGF L G S VVHG +PWF+M  +LD    R   F+Q D F+   F GNPAAV FTH GGD +WMQ VA+E NLSET +LE +     EG   GP  + +RWFTPGGEV LCGHATL +A ALW+ GRV     + F T  +G L C   +  WI MDFPA     P+ S++ +++ ++  ALG+       L++G+      D ++ VTPEAF  ++PD   L+     RG IVTC+G   A          + G DF SRFFA   PGL   EDPVTGSAHC L P+W+++LG++            L   QASPRGG +R   E    G+RVI+EG+AV+V  G
Sbjct:   34 LRFRPLAAFDLGTASEIETASYPADEAAAPEQLQYRHSRAPELFYGVYDEGT------LVGFVVGTATRGS-LVEETMSTHEPGGDSVCIHSVVVAPSRRREGIARAMVKAYIDALVADVTRCGAVRRLLLLCHTPLLGFYVQCGFHLIGPSKVVHGAEPWFDM--ELDVAARRKFDFLQADGFTSVAFAGNPAAVLFTHRGGDEEWMQAVALENNLSETAYLERRAQ---EGVEEGPAAWDIRWFTPGGEVALCGHATLCSAHALWDTGRVSRDRSIAFHTREAGTLKCEAMDD-WIRMDFPAAA---PVPSNEQDTKVSLSAALGVEPA--TVLYLGKGPEVTPDWLLVVTPEAFEQVKPDPSKLSQIRLDRGVIVTCQGAVSATGSRVLQGRPAEGFDFSSRFFASIIPGL---EDPVTGSAHCLLVPFWSARLGKKH-----------LCALQASPRGGILRCHQE----GERVIIEGQAVSVISG 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.87.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8A3_9PHAE1.020e-23376.54N-acetyltransferase domain-containing protein n=2 ... [more]
A0A1Q9DHM3_SYMMI6.080e-13147.76Putative isomerase n=5 Tax=Symbiodinium TaxID=2949... [more]
A0A812KNM8_SYMPI1.210e-12148.17Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A7R9UDB1_9STRA4.650e-12047.51Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RT05_9STRA3.280e-11545.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZD42_9STRA1.130e-11345.47N-acetyltransferase domain-containing protein n=1 ... [more]
W2QBI4_PHYPN1.420e-11144.15N-acetyltransferase domain-containing protein n=10... [more]
A0A8K1C3G3_PYTOL1.580e-11044.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J5I6M3_9STRA5.710e-11044.17N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S1A2G4_NOCSC6.270e-10944.29Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:318264..326760 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2Q8
Preferred nameAANAT
PFAMsAcetyltransf_1,Acetyltransf_10,PhzC-PhzF
Model size1757
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00096
KEGG koko:K00669,ko:K19952
KEGG ReactionR02911
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00037
Hectar predicted targeting categorysignal peptide
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004059,GO:0004060,GO:0004145,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0006996,GO:0007623,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009648,GO:0009649,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010243,GO:0010467,GO:0010817,GO:0014070,GO:0014074,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019438,GO:0019538,GO:0030186,GO:0030187,GO:0031365,GO:0031960,GO:0032868,GO:0033993,GO:0034097,GO:0034641,GO:0034644,GO:0034694,GO:0034695,GO:0034754,GO:0036211,GO:0042221,GO:0042401,GO:0042430,GO:0042435,GO:0042445,GO:0042446,GO:0042752,GO:0043153,GO:0043170,GO:0043412,GO:0043434,GO:0043543,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046483,GO:0046683,GO:0046688,GO:0048471,GO:0048511,GO:0048545,GO:0050789,GO:0050896,GO:0051276,GO:0051384,GO:0051385,GO:0051412,GO:0051591,GO:0051592,GO:0051604,GO:0051716,GO:0065007,GO:0065008,GO:0070141,GO:0070542,GO:0070887,GO:0071214,GO:0071310,GO:0071320,GO:0071407,GO:0071417,GO:0071478,GO:0071482,GO:0071492,GO:0071495,GO:0071704,GO:0071840,GO:0071889,GO:0097305,GO:0104004,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701
Exons12
Evalue1.25e-265
EggNOG OGsCOG0384@1|root,COG0454@1|root,KOG3033@2759|Eukaryota,KOG4144@2759|Eukaryota
EC2.3.1.87
Descriptionaralkylamine N-acetyltransferase activity
Cds size1734
COG categoryK
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.87.4prot_P-littoralis_Contig180.87.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig180 318287..326760 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789872.4317603-UTR-P-littoralis_Contig180:318263..3182861680789872.4317603-UTR-P-littoralis_Contig180:318263..318286Pylaiella littoralis U1_48UTRP-littoralis_Contig180 318264..318286 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789872.4495587-CDS-P-littoralis_Contig180:318286..3185271680789872.4495587-CDS-P-littoralis_Contig180:318286..318527Pylaiella littoralis U1_48CDSP-littoralis_Contig180 318287..318527 +
1680789872.4598687-CDS-P-littoralis_Contig180:318917..3189701680789872.4598687-CDS-P-littoralis_Contig180:318917..318970Pylaiella littoralis U1_48CDSP-littoralis_Contig180 318918..318970 +
1680789872.4721324-CDS-P-littoralis_Contig180:319408..3195611680789872.4721324-CDS-P-littoralis_Contig180:319408..319561Pylaiella littoralis U1_48CDSP-littoralis_Contig180 319409..319561 +
1680789872.4830027-CDS-P-littoralis_Contig180:320124..3202951680789872.4830027-CDS-P-littoralis_Contig180:320124..320295Pylaiella littoralis U1_48CDSP-littoralis_Contig180 320125..320295 +
1680789872.4920917-CDS-P-littoralis_Contig180:320645..3208461680789872.4920917-CDS-P-littoralis_Contig180:320645..320846Pylaiella littoralis U1_48CDSP-littoralis_Contig180 320646..320846 +
1680789872.512504-CDS-P-littoralis_Contig180:321409..3214991680789872.512504-CDS-P-littoralis_Contig180:321409..321499Pylaiella littoralis U1_48CDSP-littoralis_Contig180 321410..321499 +
1680789872.52376-CDS-P-littoralis_Contig180:321978..3220451680789872.52376-CDS-P-littoralis_Contig180:321978..322045Pylaiella littoralis U1_48CDSP-littoralis_Contig180 321979..322045 +
1680789872.5341744-CDS-P-littoralis_Contig180:322709..3229211680789872.5341744-CDS-P-littoralis_Contig180:322709..322921Pylaiella littoralis U1_48CDSP-littoralis_Contig180 322710..322921 +
1680789872.5447483-CDS-P-littoralis_Contig180:323567..3236931680789872.5447483-CDS-P-littoralis_Contig180:323567..323693Pylaiella littoralis U1_48CDSP-littoralis_Contig180 323568..323693 +
1680789872.5562165-CDS-P-littoralis_Contig180:325050..3251891680789872.5562165-CDS-P-littoralis_Contig180:325050..325189Pylaiella littoralis U1_48CDSP-littoralis_Contig180 325051..325189 +
1680789872.5659502-CDS-P-littoralis_Contig180:325884..3260321680789872.5659502-CDS-P-littoralis_Contig180:325884..326032Pylaiella littoralis U1_48CDSP-littoralis_Contig180 325885..326032 +
1680789872.5789018-CDS-P-littoralis_Contig180:326627..3267601680789872.5789018-CDS-P-littoralis_Contig180:326627..326760Pylaiella littoralis U1_48CDSP-littoralis_Contig180 326628..326760 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig180.87.4

>prot_P-littoralis_Contig180.87.4 ID=prot_P-littoralis_Contig180.87.4|Name=mRNA_P-littoralis_Contig180.87.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=578bp
MDPASFRVVLSLSLVFLVLCTSAAGFSVPRIRTFAQEKDNSRVSTSALIT
IGCGCGGGGGGGSSRVAVANGVAMSASIEGGLTFSPEVMALLDSKGLEVR
RLSEENLAAAVEIETASYPGDEAASPDNMSFRRANAGEFFLEATMKNVSG
VGRELVGFVCGTRSLGEELSHESMHLHDPNGPTLCIHSVAVAEKFRRRGY
ATAMLKAYVGNVALNQPGVRRVCLIAKAGLLGMYASCGFSLRGLSPVVHG
KDPWFEMRTDLDSTEPRLLRFVQVDSFSEKIFRGNPAAVFFTHAGGDADW
MQKVAIEMNLSETCFLELQPSTPGEGASLGPEYALRWFTPGGEVDLCGHA
TLAAAFALWEEGRVDPALPVRFSTASGVLTCRRDEGGWIAMDFPAEVVGD
PLSDDDESRKAIVQALGIATGGGDALFVGRNRFDVVVEVTPEAFATLEPD
MRLLAAFEHRGTIVTCKGQRGAGEEASPAVDVSAGSDFLSRFFAPGLGID
EDPVTGSAHCCLAPYWASKLGRQEARTNAFFVAFSLMGYQASPRGGTVRA
TLEKKEGGDRVILEGKAVTVFRGLFRR*
back to top

mRNA from alignment at P-littoralis_Contig180:318264..326760+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig180.87.4 ID=mRNA_P-littoralis_Contig180.87.4|Name=mRNA_P-littoralis_Contig180.87.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=8497bp|location=Sequence derived from alignment at P-littoralis_Contig180:318264..326760+ (Pylaiella littoralis U1_48)
TGCGGAGTGCGGTGAGTTGGTTCATGGATCCTGCGTCGTTCCGTGTGGTG TTGTCGCTGTCATTGGTCTTCCTGGTGCTGTGCACCTCTGCAGCTGGATT CTCCGTTCCCAGGATACGCACCTTCGCTCAAGAGAAAGACAATTCAAGAG TATCAACCTCAGCTTTGATCACGATCGGCTGCGGCTGCGGCGGCGGCGGT GGCGGCGGCAGCAGTCGGGTAGCAGTAGCAAACGGCGTCGCAATGTCCGC CTCGATTGAAGGAGGTGAGCTCAAAACCACTTGTGGCATGTGCCAGCTAC TGCTGCACTAAGCAACGCTGTGTTTGGTGCTACCAGCATGTTTGCCGCAG CTTGGTGGCATAATCCAGCCCGTGCACATACCTCGGAATCGTCCGCAGCA ATACATCATCGGACCTTACCACCCACAGAGGACAAGCCGGGATCCACACT ACTGCTGCTGTGTACCCGCCAGAACTACAGGTATCGCGATGCCTTTTGAA CACAGCTGCGCCGCTGCCCACATCATCTCAGCCAGCTAGCACACACCCCA CCTGGGCTCATTGTCAGTACTAGCCGCGGTTCAATTGCTGAGCTACCCGC CGCCGCCTGCTGTCGTCGCCATTGCGGCACAATACCGGTGCTTCGTTGCC ACAGGTCTGACCTTCAGCCCAGAGGTTATGGCCTTGCTGGATAGCAAAGG CCTGGAGGTGGGTGCGTGGTGTGCATCGTACGGTTTCGATCGTTTTTAAG CTCCCGACGATTGTGTGTGTAGTGCAAAGTGTTGCAGATGCTGCATAGGC AGGTATGCTAGCGAGCCAACCAATCTATTCGTTAGATGGGCTTATCCACG ATCCACGTACACTATTCAACGGCTGACTTGAGTGTTCGAGTGGATGAAGC TCATCGAAGCAACGGTTTTTAGAGAGGTGCATCTCAAAGAGTTCAAAGTG CTGTCTGGCACGTTTTTCGAAGGTTTTGAAATCGTCCGCCGCTGTTCTCA GTCTTGAACAATTGCAATGTGCAGTAGTCTACCCCATGAAGAGCATGTGG AGCTAGCCAAATCATTTCTGGTGTATTTGTCAAATGTTTTTTAGGACAAC AAAATCCACGCATGCACCAAAGTCTATGTTGTGTGAACGACGAAGGTGAG GAGGCTTTCCGAAGAAAATCTAGCCGCGGCCGTGGAGATAGAAACGGCCT CGTACCCCGGGGACGAGGCCGCTAGCCCGGACAACATGAGCTTCCGCCGC GCCAACGCCGGGGAATTCTTCCTGGAGGCGACCATGAAGAATGTGAGTGT GGGGTAACGGCGGTTGGTCTAATTCATATCTTGGTATCTAGCTGCAGCGT CTCCGATGTGTCGACTAGCTGAGCGGTCCATTGGAGGTGAACACATGGTG GCACGAGTTGACTAAGAAGTCGTGATCGATTTCACGATGACGCCGTTGCC TCGATGGTGTGTGTGGTATGTGATGCGAGGAAACGTGCGCGGAGATGTGT CTACTCTTCACGCACATATGATGTCCATCACGTCTTCCTGGCAAGTCAGA CGTGCATGCACGCGTTCGTTGTCGAGGTCTGGCGCTTTTTTTCTATTTCG GGGGGAAAGCAGACACAAACACACACAAACACACCGGATCGCAAAAAATT GCTGCTTTCGTCTACAACACGCAGCAGACACAACGAATGCGTGGTGTGGT ACGGCAGTGTACTTCGTATAGACGTGCTGTCGCAACCTGTCTTATCCGTA CAAACCTCCAACAAGAGCTAGAGTTTGATATCATCCCCCTTTTCCCTCCC GGCCTACCCCGCCGCCTCCCCCCCTCGCCTTCGCTCTCACTCGTCGCGAC GTTTTTTGCAGGGAGTGGGAAGAGAGCTGGTGGGGTTCGTGTGCGGCACG CGCAGCCTGGGCGAGGAACTGTCGCACGAGTCCATGCACCTGCACGACCC GAACGGCCCGACGCTGTGCATCCACTCCGTCGCGGTAGCGGAGAAGTTCC GCCGCAGGGGGTACGCCACGGCCATGCTTAAGGTATGCAGGTAGCGACCA CACTTTAGTGAGATGTGGTACTGACAGTTAAGAAACTGTTATTGGCTGCT GCGCAAGTCAACGGTAAAGTTGCTCTTTGTTTTTTTTTACGGACAAGCGG GAAAAAGAGAAGTTGGTGGGGGACAGACTGATAAGAAAGAGATGAGTGAT GCTGTGGTTTTAATTTGTACTTGTATCAGGTTGCAGACGAATTCGCCCAT CACCACCACCACACGCGCGTCCTGTCGAGAGCGGTCACGGCTCATTCATG CCCTTCGAAAGAAGTACTACAAAACAGAAACCTCGCGGTTGCGTGTTTCT GCATGCATGAATGACGCACAACCCCACGACAGGCGTACGTGGGAAACGTT GCCCTGAACCAGCCGGGTGTTCGGCGCGTCTGCCTCATCGCGAAGGCCGG CCTCCTGGGCATGTACGCCTCCTGCGGGTTTTCCCTCAGAGGCCTCAGCC CGGTGGTCCACGGGAAAGACCCCTGGTTCGAGATGCGGACAGACTTGGAC TCCACGGAGCCGCGCCTGCTGAGGTTCGTTCAGGTGGGGACTACGACACA TACCCGGCTGACAAATTTGGAACCGGGTCCTCGGTGGGGTTTGGGGGGGT GGAACCGGAACTGGGTGCAGTATCCGTTTGACAAAATGCGGTGCCCCTCC TCACATGGGTCCCCCATGATTAGCACTCGCGGGCCCCCAACACGTTCCAA CGGGCGCCGTGTGTGCTGATCATGGGGGTACCCACGTGCGTAGGGGCGCC GTCTTTCTACTCTAAATACCGGCGTTTCCAAGGGGTTGAACCGGAACCGG ACACTTTCACCCGGTTCCGGGTACCCGCTACCGGGTACCTGGTTCTGAGC TTGCCGGGTATGTGTCCTGGTTGGGACACGGCTGGCTGCGCCGCGCGTTT TTTTGTTTGTTTTGTCAGTCATGTTGATCAGGGATTGGTACAGAACAGAT GTTGAACTTTTTTAAGAACTGCAGTTGTGATCTGGCTCGGTAAATTTCTT TGCGGGCGCCAGAAGTGTAATACATGTATTGTATCGCCATCTTGCCCCTG CGGCGGTCTGACAGGCTCACGACCAACTCACCGTGCGTCCCGGCAGGTTG ATTCCTTTTCGGAGAAAATATTCCGCGGGAACCCGGCGGCCGTGTTCTTC ACTCATGCCGGAGGGGATGCTGACTGGATGCAGAAGGTAAAAATGATCAT TTCGTGGCTGCTGAGACACATCCGGTACTGCACGTGACTGCATATGGTAG CTGCTTGCCGAAGAGGCATACATAGCGAAGCCTTGAGTGCGCCGGTCCGC AGTCAGCCGAGGTCCTAAGCAGCAAGTAGGTGGCGCGCCGCCCTGCTTGT ACGACAAATGCTGCCACTCTAGGAGCTGTTTTGAGCCCTATGAGCATCGT CTACTGTGCAGCAATTGCTGTCCTCCCTTTTTCGGAATGAAATTGCTGGG GGTCGTGGCGTGCCCCTTTATCCTACTGTACGCCGTCACGTGAAGTATTT TCCGGGTGTTACAGATGTGCATCCCGTAGTGAGAGGCGACGACAACAAAA TCACCAACAACAACCTCTACTCACTTTCACCAGCTTGACCTTCACTCTCT TGGTTACGAAGCGAGTCACATCCACCGCCCATGCCCCCCCCGTTGTCATA CATTCCTGAAATCAGGTTGCCATCGAGATGAACCTCTCCGAAACATGCTT CCTCGAGTTGCAACCCTCCACCCCTGGCGAAGGTAAATTGAAACAGATTT AACAACAATACATACAGGGCAATCGGCGTTTGCAGCCGAACTCAACCGCC TCCTCGTCATTTACAGGAAGAAGGGAGATAGAGGCTTGCGTCGCCTCTAG GGGGGAAGACGCACGTAGTCCAATGCTTGGTTAGGCGGAGTGGGAAGGAG AACTTTCCCCTTTGCAAATCGTTTTTCTGCGTGAATGTCGGCTGAAGGAG GCACCGAAAACTCGGAAACGTATTCGTGGTTGTAACGGTGTAGGCTAAAA GTTAGCGCCTATGGAACACCAACAGAGCGTCTATCGTGTCCGTGGGGCAA CGCGCAGAGTCGACCACGGTAACCAGCAGTGAAACCGTCCAGTTGTTGCT CCTCGCTGTCGTCGGAAGCCTGCGGCGCCGATCGCGAAGTCATCTTGTCC TCGGACCGACCCCAATCGTGACCACAGAAACCACATTTTTCGCGCTCCTT GTATACCGACCGTGCCCTCCCATCCGTAGAGGCGACCGCCCCACCGCGAC GCGTAACGACCTTGTTCTGAAGCATCATATCAGCATTTTTTTTTTTCACA TTTCGTAGACCAATACCAATGCCTGGCATGCAGCTAACACAAAAACAAAC GTGTGGTTTTTCTTCCTTTGGTTTTTGGTTGCGCTCCCTGGGAAAGGGGC CTCTCTGGGGCCCGAGTACGCCCTGCGCTGGTTCACGCCCGGAGGGGAAG TCGATCTCTGCGGGCATGCTACCCTTGCGGCTGCCTTCGCGCTGTGGGAG GAGGGTCGGGTTGACCCCGCCCTCCCCGTTAGGTTTTCCACAGCGAGCGG CGTTCTGACGTGTCGACGTGACGAGGGCGGCTGGATAGCCATGGATTTTC CTGCTGAGGTGGGAGAAATATGCTTCCAGGCGTCTCTTGGGGCAAGATCG TATCTATGATGTGAAACCACAAGTGGAATCAGCGGCAGCACTGTGCACGA TATTTCCTGCCTAGCAGGATAGACTTACGTCTCCCCGCTGTGTTTCCCCT GCTGTGTGACCTACGATGCCGCATGAAATGAGAACGAATGAAAGCCCGCA CGAACATTATAAGTCCAACAACCACCACAACGCACTGTGATATTGTCAGC CTGCCTGTTTGATGTTGGAAGTCGGTCGTCTATCGCCGACAAGAGGAGGC AGGAGCGATTTTTACTGTGTAAATAACCACCACAACCATTATCATAACAA CCAAACCACAACCTCAACCACAACAACCACTACCACAATAACCGAAACAC AACCACAACCACAACCACAACCACAACCACAACCACAACCACAACCACAA CCACAACCACAACCACAACCACAACCACAACAACAACAACAACAACAACA TCAACAACCACAACTACAACTACAACCACAACCACAACCACATCCACAAC CACATCCACAACAACACCAACAGCAACAACAGCAACAACAGCAACAACAA CAACACGAGAAGTGGACCGTGACGCCTACTTTGCCTTACAATCGTCCGTG ACAGGTTGTCGGGGACCCGCTCTCGGACGACGATGAGAGTCGCAAAGCGA TAGTCCAAGCCCTCGGGATCGCCACGGGAGGAGGAGACGCGTTGTTCGTG GGCCGAAATCGCTTTGACGTAGTCGTGGAGGTAATGTATTGTGCTATTTT TGCCATACGCGAGGTGATGAATCGCGGTAAAATATTGGGTGAACGTTGCC AGTGGGTGACATTTGCCGGCCTTAGAGAAGAAAGTGCTCGGTTGGTAGCT TTTACAGGCAGCGAACGGCGTGACGTCATGCTACTGAGAACATCACTCGA TGCCTTGTCATCGACTAAAGAAACATGCAGTGTGATTCATAATCATACAA ATGTATTTCATTCTTCGATCACCGCCCGACGCACGATGCTTTCCCGAGGG GGCAAGCAACCCTCTGTCCATTAAATTCCCAATGCCGTACTGTAGAGGCA CAGCGGTGGTCAACGCGACGCCTTCTTTTGCTGAAGTTTTCACCACGAGA GTTCCTCGCGCAGAACGACCGCGTGACTGCACGGTCCTGACAATCGCGAT GATGTCGGGCGCTGTCTATTCCAACCACCTTCCCGAGACTGTGTACTCCT GCTGTAGTGCCCATGATTACATACAAACGCAATATTATTTAGGTAGCCTT CTACTGGGCGCGGTAAACTCGCGGGTGAGCACCAAGAAATCATACGAGTA TGCACGCGGAGGTCGTGTCCGTAACAACCCAGTAGATCGCGCAAGAACTG CATTCAAATAGAAGTCACCACGTACCAGAGCTATAAGACGCCGGTTGGAC AATGATAGCCGGTAGTCCATCCCACTCCTACCCGTCAACTCGCAACTGAA AATCCAGAGTGTGTCAAACAAAGTTATCTACTGCGTACTAAATAGGAACA TTTTTGTTTGGGTGCATAGAACATCTAAACAAAATACGACCTGGATATCC TTTGGTACAAGATCTACTTCGTAACGCACCACCAGTATCACCGCCCGCGG CTACAATACTGAGATAACCGACTTGATTTCGCCGCGAAATCGTTTTTGTT GCTGTTCCAAGCGGTAGTGATGTCCTGGTAGTGACGTCATAGTGGAGGCG GTTCAAGGTGTTGCTTTTGTGCCGTACGAAGGTAGCCCGTTACTGTCTTG TGATTCGTCGTCGTATTTTTATATTTCATCGGGCTACCGGGATCGCTTAT ATCAATCGTGTCGCACGTTCCCCTAATGATGAGCAGGGACAAGGTCCTTG TCCGAGCGATGCTTCGGGCGAAGGTAAATAGGTGCGATCGATAGACAGGG TGCAAAAGTTTGTTCTCCGAGCGTCCTACAAAATTTCGTCGACTCTACGA GACGTCGTCAACGCTGTCGCTCTTTCCTCTGCCCCTCTTGTGATCTACAA GATGATCAATCCATCCGCAGCGGCTGACCACCGGTCTTGGCATTGTTCCC TGAAAATCTTCGCTCACATACATGCTCTAATTTCAAGGTCACCCCTGAGG CGTTCGCAACTCTAGAGCCAGATATGAGGCTGCTGGCCGCTTTCGAACAC CGCGGAACCATCGTGACGTGCAAGGGGCAACGCGGGGCTGGGGAAGAGGC CTCCCCTGCCGTCGACGTTAGTGCAGGTAAAAAACACATCGCTGGACGAA CATATGCACGCGTGCTGTTCCAACAAATACATGGCATCCCGTCACGAGTG GTTTGCCGCACGTACTGTGTCGGAAGAAAATATGGGGCTCAAACCGTTCC GTTGCAGCATGGCCCCTCTCGTAATATCGATGCTGCTGTTACACGCGGGG GCTATTTTGAGTTACTGCTGTCGTCTGAGCCGCCCCCCCTGGGGGCGCCA GCACATGCCTTTTTTACCCCAGACGACCACGGTGTATGTATCTTATACCT AACTGCTGGACCACCCGGACAGACCCTGTGGATCGATTATCATAGCTCGA CGCCTCCACACAACAGCATGAAAAATAGTTTTTCGGTGCCGATAACAGGG CGGCGTCTGGGGAGATGACTTCAAGGGAGCTTCCGAACACCCGTCGCACG CATCGCTTTTCACATGGGCTGCAAAACTCCGTATCATACGTTGCGGGGAA ACTGACCTTCGAAAACCGATCCCGGGGTGTGCGGTGTATTTTGTATTTTC CACCTTCTAACATTGAACGGCGGTATTTATCCAAAATGTTTTCCCCACCC ATCCGCAGCCTCCTCGCTCCTGACAGACCCTTTTCTTATTGTACCGTTGA CGGAGTTTACTTGTTCCCGCTGTTTTTGCACGCACCCGCTCGACGTGTTT TCTCTCGGCGTGGCTTGGCAGGGAGTGACTTCCTGAGCCGGTTCTTCGCG CCGGGGCTAGGCATCGACGAGGACCCCGTGACCGGTTCGGCTCATTGCTG CCTAGCGCCGTACTGGGCCTCCAAGCTGGGCAGGCAAGAAGCAAGAACGA ATGCCTTCTTTGTTGCTTTGTTTTTTTGTTTTCTTGCTACGCTATCATAT CATGCGCGCGTCAAACTCGCTGTGTTTGTTCGTTCCCGTGTTTTTTTTTT TTGTCCCTGGGTGCGCGTGTGTGTCACCGAGGATTTTGTCTCGCCATGAT GACTATTGAGAGGGCTTTTAGGGGGCCGGATTGTGTCAAAAAAAGTGTGA AACGATATTTACTATTGTAGGACGCGGGCTCGGCGTAGGCGAGGATTTCA GGTTGTTGGTGCTGCAGGAACAACGCTTGTTTCGTCGTCGGTCTTTCGTT TCAACACGACTTTTCTGTACGAGTGTGAAAGTACGTTTCAAGTTTTCGAA GAATGAGTTTCCCTTGTGTGTAGTAGTAAGGTAGGAAGAACGGTCTCTGA ccccCCCCCCCCCCCCTGAAAAAAGGGTGATCATGACGCCAACGGAGTTG TAACTATTTGCGACGCATCCCTCCTCCTCCTCCCCCCCGCCGCCGTTCGT TATCCTTGCTTTGTCGTGTGTGGTGGGTTTATCCCCCCCCCGGGCCAAAA CTGGTCTCGGCGTTGGACTCGCCCTCGGTTTCCGCTTGGTCGCGTCATGC CCGCCGCGAAGGAGTTCCTTGATGGGTTATCAGGCGTCGCCGAGAGGCGG GACTGTTCGAGCAACGCTAGAAAAAAAAGAGGGAGGCGATAGGGTCATTC TTGAAGGGAAGGCGGTTACCGTGTTCCGCGGGTTGTTTCGTCGTTGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig180:318264..326760+

>mRNA_P-littoralis_Contig180.87.4 ID=mRNA_P-littoralis_Contig180.87.4|Name=mRNA_P-littoralis_Contig180.87.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1734bp|location=Sequence derived from alignment at P-littoralis_Contig180:318264..326760+ (Pylaiella littoralis U1_48)
ATGGATCCTGCGTCGTTCCGTGTGGTGTTGTCGCTGTCATTGGTCTTCCT
GGTGCTGTGCACCTCTGCAGCTGGATTCTCCGTTCCCAGGATACGCACCT
TCGCTCAAGAGAAAGACAATTCAAGAGTATCAACCTCAGCTTTGATCACG
ATCGGCTGCGGCTGCGGCGGCGGCGGTGGCGGCGGCAGCAGTCGGGTAGC
AGTAGCAAACGGCGTCGCAATGTCCGCCTCGATTGAAGGAGGTCTGACCT
TCAGCCCAGAGGTTATGGCCTTGCTGGATAGCAAAGGCCTGGAGGTGAGG
AGGCTTTCCGAAGAAAATCTAGCCGCGGCCGTGGAGATAGAAACGGCCTC
GTACCCCGGGGACGAGGCCGCTAGCCCGGACAACATGAGCTTCCGCCGCG
CCAACGCCGGGGAATTCTTCCTGGAGGCGACCATGAAGAATGTGAGTGGA
GTGGGAAGAGAGCTGGTGGGGTTCGTGTGCGGCACGCGCAGCCTGGGCGA
GGAACTGTCGCACGAGTCCATGCACCTGCACGACCCGAACGGCCCGACGC
TGTGCATCCACTCCGTCGCGGTAGCGGAGAAGTTCCGCCGCAGGGGGTAC
GCCACGGCCATGCTTAAGGCGTACGTGGGAAACGTTGCCCTGAACCAGCC
GGGTGTTCGGCGCGTCTGCCTCATCGCGAAGGCCGGCCTCCTGGGCATGT
ACGCCTCCTGCGGGTTTTCCCTCAGAGGCCTCAGCCCGGTGGTCCACGGG
AAAGACCCCTGGTTCGAGATGCGGACAGACTTGGACTCCACGGAGCCGCG
CCTGCTGAGGTTCGTTCAGGTTGATTCCTTTTCGGAGAAAATATTCCGCG
GGAACCCGGCGGCCGTGTTCTTCACTCATGCCGGAGGGGATGCTGACTGG
ATGCAGAAGGTTGCCATCGAGATGAACCTCTCCGAAACATGCTTCCTCGA
GTTGCAACCCTCCACCCCTGGCGAAGGGGCCTCTCTGGGGCCCGAGTACG
CCCTGCGCTGGTTCACGCCCGGAGGGGAAGTCGATCTCTGCGGGCATGCT
ACCCTTGCGGCTGCCTTCGCGCTGTGGGAGGAGGGTCGGGTTGACCCCGC
CCTCCCCGTTAGGTTTTCCACAGCGAGCGGCGTTCTGACGTGTCGACGTG
ACGAGGGCGGCTGGATAGCCATGGATTTTCCTGCTGAGGTTGTCGGGGAC
CCGCTCTCGGACGACGATGAGAGTCGCAAAGCGATAGTCCAAGCCCTCGG
GATCGCCACGGGAGGAGGAGACGCGTTGTTCGTGGGCCGAAATCGCTTTG
ACGTAGTCGTGGAGGTCACCCCTGAGGCGTTCGCAACTCTAGAGCCAGAT
ATGAGGCTGCTGGCCGCTTTCGAACACCGCGGAACCATCGTGACGTGCAA
GGGGCAACGCGGGGCTGGGGAAGAGGCCTCCCCTGCCGTCGACGTTAGTG
CAGGGAGTGACTTCCTGAGCCGGTTCTTCGCGCCGGGGCTAGGCATCGAC
GAGGACCCCGTGACCGGTTCGGCTCATTGCTGCCTAGCGCCGTACTGGGC
CTCCAAGCTGGGCAGGCAAGAAGCAAGAACGAATGCCTTCTTTGTTGCTT
TTTCCTTGATGGGTTATCAGGCGTCGCCGAGAGGCGGGACTGTTCGAGCA
ACGCTAGAAAAAAAAGAGGGAGGCGATAGGGTCATTCTTGAAGGGAAGGC
GGTTACCGTGTTCCGCGGGTTGTTTCGTCGTTGA
back to top