mRNA_P-littoralis_Contig180.73.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: D7G2R5_ECTSI (DUF2040 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R5_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 7.520e-142 Identity = 296/438 (67.58%), Postives = 311/438 (71.00%), Query Frame = 1
Query: 112 MRKSGVKFGLIGTASSLKKGGAPA----NKGRPIGSKPAPRRRPPGATSVFDADSDDEEGGPKADLNGVAAVNKRLAAISAKQEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATADYEMQDGSAKAKTPYVRRKXXXXXXXXXXXXQDAAGTDMRAERGDKSSPEKAHEQETDT--GPTARMVDSRAAEAKRREAVPMGTRGHDESTAVRRREERDEDDAPGDPEGSAKRARLGEEGGXXXXXXXXXXXXXXXXXXXXPQEATAEEKSAVEELEKVKKAAAAXXXXXXXVKAARERFLARKKAA 1407
MRKSGVKFGLIGTASSLKKG + A +GRPIGSKPAPRRRP G+TSVFDA+SDDEE K DL+GV AVNKRLAAISAKQEK AKKEYEDAL+ADPSVFDYDRVYDGMKESRESK A TVA EKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKERE QDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGM GFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAAT +YEMQDG+ +A XXXXXXXXX A G G + TD GPTARMVD RA E K+ G R D + RRR D+ + AKRARL E E T EEKSA E + XXXXXXX ARERFLARKKAA
Sbjct: 1 MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPAGSTSVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEMQDGNEQAXXXXXXXXXXXXXXXXXEGGP-ANGASQGGREGRDGGDADSSPGRTDESGGPTARMVDPRAGEQKKSRRDEAGVR--DSERSGRRR-----GDSGEAVDNVAKRARLAGEASDGGDASVGDDGGVEQRQ----DERTDEEKSAAEAADXXXXXXXXXXXXXXXXXXARERFLARKKAA 426
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A835YZI8_9STRA (Coiled-coil domain-containing protein 55-domain containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI8_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.680e-54 Identity = 130/250 (52.00%), Postives = 165/250 (66.00%), Query Frame = 1
Query: 130 KFGLIGTASSLKKGGAPANKGRPIGSKPAPRRRPPGATSVFDADSDDEEGGPKADLNGVAAVNKRLAAISAKQEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVA--HEKEKR-QPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKT---GMSGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATADYEMQ 861
++GL+G A +LK A + + AP R P A + F DSD + G D AAVN+RLAA A++ + +K A+ DPSVFDYD VYD + + R+ KA A A ++K KR QP+YIGNLL+QAK+R VE DR++DRKL KEREE DK G A MKFVTSAYK KLMEQKKWE+ Q+ E ERE + + GM+ FYSNL+TKNIAMGGDV A SAFTAGS+RHAA A ++++
Sbjct: 3 RYGLLGNAKTLKAQSVAAKTAK--APRKAPARGP--AVAAFGDDSDSDGGAGAEDPTSRAAVNRRLAAEQAERARRMEKVAVQAVMDDPSVFDYDGVYDEVSKGRDDKAAAAAAARGNDKTKRLQPRYIGNLLEQAKLRTVEQDRVYDRKLAKEREEGDKEFGAAEMKFVTSAYKAKLMEQKKWEVAQEREAEREAQAEADMKRGGGMTAFYSNLLTKNIAMGGDVAN-ATSAFTAGSRRHAAAAAFKVK 247
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A7S1XVS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVS8_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.760e-35 Identity = 87/153 (56.86%), Postives = 114/153 (74.51%), Query Frame = 1
Query: 379 ALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEG--EATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGSKR 831
AL D SVFDYD VYD M +R+S A A A E+++R+ KY NLLKQA+MR ++SDRI++RKL++E E ++ G + KFV +AY+K+L E++ WE ++ E ERE RNDVTKTGM GFYSNL+TKNIAMGGDV K+A S+FT GSK+
Sbjct: 4 ALTEDASVFDYDGVYDSMTSARDSAAAAQ--ASERKERKSKYTENLLKQAQMRKLQSDRIYERKLRREAAEVAEMHGGVKDEDKFVGAAYRKQLEEREAWEKAEREEAEREARNDVTKTGMMGFYSNLLTKNIAMGGDV-KNAQSSFTVGSKQ 153
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A7S3HBP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBP6_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.620e-33 Identity = 89/196 (45.41%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 244 SVFDADSDDEEGGPKADLNGVAAVNKRLAAISAKQEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGSKR 831
S+FD D DE+ A N V+ VN +LA +A E+ A A+P ++DYD YD K ++K + K+ + +Y+ NLL +KMR E +R+F++ L KER+ +D G+ KFVT+AYKKKL+E KKWE + +L DE EQR DV K+GM GFY+NL+TKN+AMGGDV+ A S +TAGS R
Sbjct: 31 SMFDRDDSDEDS--SAVSNDVSRVNAQLARRNAILEQTMSA----AASAEPDIYDYDGAYDSFKAKEQAKHQLSQPIATKDAPKARYVNNLLATSKMREKEKERVFEKNLLKERKVEDAEFGDKD-KFVTAAYKKKLLEDKKWEYEDRLADEVEQRTDVRKSGMEGFYANLLTKNVAMGGDVDAHAVSVYTAGSAR 219
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: W7TFP5_9STRA (DUF2040 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFP5_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.440e-31 Identity = 97/243 (39.92%), Postives = 140/243 (57.61%), Query Frame = 1
Query: 130 KFGLIGTASSLKKGGAPANKGRPIGSKPAPRRRPPGATSVFDADSDDEEGGPKADLNGVAAVNKRLAAISAKQEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTK---------TGMSGFYSNLITKNIAMGGDVEKSANSAFTAGSKR 831
K+GL+ +K P +GRP + APRR P G+ D D D+ G + L A+ NK L A S K +K+ ++ A +DPS++DYD VYD + RE + A ++EK+ +YI NL + A+++ E DR ++R+L KER+E+D L + + FVTSAYKKKLME +KWE +LE+ +GM F+SNL+TKNIAMG DV+ +A SA+T GSK+
Sbjct: 10 KYGLVVP----QKKAVPGMRGRPRPASAAPRR-PAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDV-FVTSAYKKKLMETQKWETIDRLEEXXXXXXXXXXXXKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQ 246
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A7R9YG81_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG81_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.660e-29 Identity = 88/200 (44.00%), Postives = 130/200 (65.00%), Query Frame = 1
Query: 235 GATSVFDADSDDEEGGPKADLNGVAAVNKRLAAISAKQEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGE--ATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGSK 828
G +S F + +D E P+ADL+ V + R A S + ++ ++ + ALE D +VF+YD VYD SR +K VA +K KR+ KY LL+QAK+R + +DR+++RKL +E+ E+ KL G+ A +FV +AY+K+L E++++E + E E E DVTK GM+GFY NL+TKNIA GGD+E A S+FT GS+
Sbjct: 33 GVSSAFASTVEDVET-PQADLSAVNSALARGAYTSKRAQRETLEQQKAALEQDATVFEYDGVYDDFVNSRAAKEAQ--VAEDKRKRKSKYTEALLQQAKLRKLANDRVYERKLLREQAEEAKLNGDVKAEDRFVGAAYRKQLEERERYEAALKAEAEAEAAADVTKKGMTGFYQNLLTKNIAFGGDIEN-ATSSFTVGSR 228
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A1V9ZKX0_9STRA (DUF2040 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKX0_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.340e-29 Identity = 82/158 (51.90%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 358 AKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MSGFYSNLITKNIAMGGDVEKSANSAFTAG 822
A++ ++AL +DP+VFDYD VYD M+ R + A V Q KYI LL++AK+R +E DRI +R+L KEREE DKL G+ T KF+TS+YK+KLME K+WE + E E DVTK G M+GFY+NL+T NIAMGG +EK A SA+T G
Sbjct: 60 AERAVQEALASDPNVFDYDGVYDSMQAERVKQKAAKKVEGVP---QSKYINVLLEKAKIREIEHDRIRERRLLKEREEDDKLHGD-TEKFITSSYKRKLMEAKRWEEEDARLAEIEAAQDVTKRGELGMAGFYANLLTNNIAMGGTIEK-ATSAYTTG 212
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A2D4BZE0_PYTIN (DUF2040 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZE0_PYTIN) HSP 1 Score: 127 bits (320), Expect = 7.400e-29 Identity = 97/252 (38.49%), Postives = 140/252 (55.56%), Query Frame = 1
Query: 379 ALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MSGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATADYEMQDGSAKAKTPYVRRKXXXXXXXXXXXXQDAAGTDMRAERGDKSSPEKAHEQETDTGPTARMVDS--------RAAEAKRREAVPMGTRG 1101
ALE DPSVFDYD VYD ++ SR+ K E EK+Q KYI +L+++AK+R +E +RI +R+L KER +D L G+ K ++++YK+KLME K+W+ + D E DVTK G M+GFYSNL+TKNIAMG D S+ SA+T G K+ T E D SA+ + + A T R +KS + H + +T P AR ++ +++E+++REA G G
Sbjct: 50 ALEEDPSVFDYDGVYDEIQSSRQDKLSKRKAEREAEKKQSKYITSLVEKAKIREIEHERIRERRLLKERATEDALYGDKE-KLISASYKRKLMEMKRWDEEDARLDAVEAAEDVTKRGTEAMAGFYSNLLTKNIAMGSDAS-SSRSAYTVGGKKETDTR--EDADASAEKR-------------------EQPAWTPRHIGRDEKS--QSQHHDDKETHPVAREEENEEQPLKKLKSSESEKREATTSGQTG 276
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A662Y6L8_9STRA (DUF2040 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6L8_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.570e-28 Identity = 93/207 (44.93%), Postives = 123/207 (59.42%), Query Frame = 1
Query: 280 GPKADLNGVAAVNKRLAAISAK--QEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MSGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATADYEMQDGSAKAKT 885
G KAD + AA +R+ +A+ Q+ ++ AL DPSVFDYD VYD MK +R+S+ V E EK+QPKYIG LL QAK+R VE++RI +R+L ER+ D L G+ K V+++YK+KL E K+W+ + E R+DVTK G M+GFY+NL KNIAMGG A SA+TA E QDG K T
Sbjct: 28 GNKADEDAKAADRRRVGLEAARSLQQSQVERTRAQALADDPSVFDYDAVYDDMKSARQSEVTKRAVQREAEKKQPKYIGTLLAQAKIREVENERIRERRLLHERKADDALYGDKE-KLVSASYKRKLQEMKRWDEEDARLANLEDRDDVTKQGEHAMAGFYANL-NKNIAMGGSTAN-ARSAYTA---------KEEPQDGDRKEST 222
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Match: A0A7S4E5L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5L4_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.830e-28 Identity = 79/177 (44.63%), Postives = 114/177 (64.41%), Query Frame = 1
Query: 313 VNKRLAAISAKQEKAAKKEYEDALEADPSVFDYDRVYDGMKESRESKAVATTVAHEKEKRQP--KYIGNLLKQAKMRAVESDRIFDRKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHA 837
V +++ + A Q K A + A DPS++DYD VYD MKE K A + +P +YIG+L + AK+R E DR+++R+L KE +EQDK T +FVT+AYKK+L E +KW+ + + DE E+R +GM+GFYSNL+T+NIA G DVEK+A S++T GS+R+A
Sbjct: 52 VAQQMRDLGAAQRKRAXXQAAQAAAVDPSIYDYDGVYDQMKEDERKKISARSGLSNTNHSKPGARYIGSLKQAAKVREREFDRVYERQLLKE-QEQDKDTYGDTERFVTAAYKKQLQESRKWDAEDRRMDEVEERTSAQTSGMAGFYSNLLTRNIAAGADVEKAAVSSYTHGSRRNA 227 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.73.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig180.73.3 >prot_P-littoralis_Contig180.73.3 ID=prot_P-littoralis_Contig180.73.3|Name=mRNA_P-littoralis_Contig180.73.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=433bp MRKSGVKFGLIGTASSLKKGGAPANKGRPIGSKPAPRRRPPGATSVFDADback to top mRNA from alignment at P-littoralis_Contig180:262030..265210- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig180.73.3 ID=mRNA_P-littoralis_Contig180.73.3|Name=mRNA_P-littoralis_Contig180.73.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=3181bp|location=Sequence derived from alignment at P-littoralis_Contig180:262030..265210- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig180:262030..265210- >mRNA_P-littoralis_Contig180.73.3 ID=mRNA_P-littoralis_Contig180.73.3|Name=mRNA_P-littoralis_Contig180.73.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1299bp|location=Sequence derived from alignment at P-littoralis_Contig180:262030..265210- (Pylaiella littoralis U1_48)back to top |