mRNA_P-littoralis_Contig180.30.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig180.30.1
Unique NamemRNA_P-littoralis_Contig180.30.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 1.350e-81
Identity = 152/347 (43.80%), Postives = 206/347 (59.37%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            F+ +FN+WY RF KR+ FSIRR+TSV QK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++ +  T+++CF +CGLTL LDGSEDH
Sbjct:   27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.830e-80
Identity = 150/347 (43.23%), Postives = 206/347 (59.37%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            F+ +FN+WY RF KR+ FSIRR+TSV QK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++I+  T+++C K+CGLTL LDGSEDH
Sbjct:  221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.420e-78
Identity = 153/376 (40.69%), Postives = 206/376 (54.79%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRS-----------------------------CFKVCGLTLNLDGSEDH 879
            F+ + N+WY RF KR+ FSIRR+TSV QK P+G+EG AWA + KLR +L   A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E +   L   A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++I+  T+ S                             CFK+CGLTL LDGSEDH
Sbjct:   27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.290e-76
Identity = 151/355 (42.54%), Postives = 204/355 (57.46%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            F+ +FN+WY RF KR+ FSIRR+ SV QK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF+  T +                         G+PA G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W+ ++  T+ +CFK+CGLTL LDGSEDH
Sbjct:  181 FKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 3.390e-72
Identity = 153/362 (42.27%), Postives = 202/362 (55.80%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYT----SWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            F+ +FN+WY RF KR+ FSIRR+TSV QK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF+                                 GG  N   P     G   +   + SW D  + + W+   +  RP + S   QRP +LVLDDF+CH++E F   L   AKT V+ + GGLT + QPLDR +NK+ KR +R +YT    S + D   RSG K+  P  G+V+TW KE W++I+ +T+ +CFK+CGLTL LDGSE H
Sbjct:  209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVAD--ARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 8.170e-72
Identity = 152/375 (40.53%), Postives = 197/375 (52.53%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            F+ +F +WY RF KR++FSIRR+TSV  + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG                            EK R+T+ LAV  DG KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R  YT+      RD   ++G K+  P RG VATW K  W +I+  T+++CFK+CGLTL LDGSEDH
Sbjct:  114 FKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 484          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.120e-69
Identity = 148/347 (42.65%), Postives = 194/347 (55.91%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 876
            F+ +F  WY+RF +RH  SIRR+TSV QK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF+                            NFGYP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +              T V+++ GGLTP+ QPLDR ++KE KR +R RYT ++       ++G K+  P RGLV+TW KE W  I+  T++ CFKVCGLTL LDGSED
Sbjct:  200 FRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTG-KLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 5.190e-67
Identity = 120/273 (43.96%), Postives = 167/273 (61.17%), Query Frame = 1
Query:  136 QKLRSSLREHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            + L S      +  +F  L NMDQTP+Q EMP +TT+EKTG K A ++TGGE EK R+T+VLAV  DG+KV  RII+ G PF+  T +                         G+PA G+S GVQ+ SW D  + + W +  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++          K+  P RG+V+TW K  W++I+  T+++CFK+CGLTL LDGSEDH
Sbjct:   33 EDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 5.330e-67
Identity = 144/339 (42.48%), Postives = 189/339 (55.75%), Query Frame = 1
Query:   19 RFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTL 855
            +F +WY RF KR++FSIRR+TSV QK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGL P+ QPLDR +NK+ KR +R  YT+      RD   ++G K+  P RG VATW K  W +I+   +++CFK+CGLTL
Sbjct:  184 KFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.500e-63
Identity = 115/254 (45.28%), Postives = 159/254 (62.60%), Query Frame = 1
Query:  199 MDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH 879
            MDQTP+Q EMP +TT+EKTG K A I+TGG+ E+ R+ +VLAV  DG+KV PRI +KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+ H++E F   L   A T+V+ + GGLTP+ QPLD  +NK+ KR +R +Y ++        RSG K+  P RG+V+TW KE W++I+  T+++CFK+CGLTL LDGSEDH
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGK-EQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDH 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE1.350e-8143.80DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE2.830e-8043.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE1.420e-7840.69DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE1.290e-7642.54DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE3.390e-7242.27DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE8.170e-7240.53DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.120e-6942.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE5.190e-6743.96DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE5.330e-6742.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT06_9PHAE1.500e-6345.28DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:92208..93781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size879
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categorymitochondrion
Exons4
Evalue1.96e-46
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size879
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789869.5145364-CDS-P-littoralis_Contig180:92207..923841680789869.5145364-CDS-P-littoralis_Contig180:92207..92384Pylaiella littoralis U1_48CDSP-littoralis_Contig180 92208..92384 +
1680789869.5266166-CDS-P-littoralis_Contig180:92489..926061680789869.5266166-CDS-P-littoralis_Contig180:92489..92606Pylaiella littoralis U1_48CDSP-littoralis_Contig180 92490..92606 +
1680789869.5369918-CDS-P-littoralis_Contig180:93127..932311680789869.5369918-CDS-P-littoralis_Contig180:93127..93231Pylaiella littoralis U1_48CDSP-littoralis_Contig180 93128..93231 +
1680789869.5500128-CDS-P-littoralis_Contig180:93300..937811680789869.5500128-CDS-P-littoralis_Contig180:93300..93781Pylaiella littoralis U1_48CDSP-littoralis_Contig180 93301..93781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.30.1prot_P-littoralis_Contig180.30.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig180 92208..93781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig180.30.1

>prot_P-littoralis_Contig180.30.1 ID=prot_P-littoralis_Contig180.30.1|Name=mRNA_P-littoralis_Contig180.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp
MEKFQKRFNAWYYRFLKRHRFSIRRKTSVRQKKPEGWEGKAWAFIQKLRS
SLREHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEK
LRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNNFGYPAGGISLGVQKSSW
CDGTQSDEWVTQDFMRRPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDL
AKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKV
TAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDH
back to top

mRNA from alignment at P-littoralis_Contig180:92208..93781+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig180.30.1 ID=mRNA_P-littoralis_Contig180.30.1|Name=mRNA_P-littoralis_Contig180.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1574bp|location=Sequence derived from alignment at P-littoralis_Contig180:92208..93781+ (Pylaiella littoralis U1_48)
ATGGAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAA GAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGAGGCAGAAGAAGC CGGAAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCA AGCCTGCGTGAGCACGCGCAGGAAGCCGTTCTCTTGGAGAGGGCAGCCCA GGCAGCGAAGGACGGAGGGACCGTTGAGATCGAGATGGACGTCATCGCAA CTGCGGAGGAACTTCTGGCTGTTCAGGGCAAGATCTTCGCCCTTCTGTAC AACATGGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGT GGAGAAGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGG TGTACTAAAGGTATTTCGATTGTTGAAATTCAGTTCAAATCAACATGGTG GAGATTTTCTGACGATGGAACAAGCGGGGAATTACAAATTTGCCGACGGC GGAAAAACGGGGAATTATAATATTTTGCATTGCTTCTGCCGTCACGTGCA CGCTTTCGTTCTTCTATTGCCTGCAAGTACGGTACGTACTGCTGTATCGC CTGTCCCTTCGAACTACCGGTACACAGCGATGAAATTATTCATATGGTAT TCCGCTGAAGTATTTTTTTTAATATACATATGTTTTGGGGGGCAATATAT ATTTTACCGTATACACCGGAGTTTGTTTTTATTTTACTTTTTTATGTTGT GGTAGGCATTACACCCCAGGAGTTAAAGGTGTGTGTTTGTTTTTTATTAT TATTTATTTTTTGTTTGTTGTGGCAGGCAATACGATTAATAATTGTACTG CTTTGCGGAGTATTTTCTTTTAACACAATTTCCTTTGTTTGCATACGCCC CAATTTTCGCACCAGGCAAGGAGAAGCTGCGGTACACCGTGGTGCTAGCT GTCCGGGGTGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAA CCCTTTTGTCGGGGGTACCAACAAGTCAGGCTCAGCCAAGAAGCCTGGCA AGAACAGCCTGTCGTACGAGCACCTCCCAGACAAACGGACGAGCTTCGGC TACCCGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGA CGGCACCCAGTCCGACGAGTGGGTAACCCAGGACTTCATGCGCCGCCCAG GGTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTC AGGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCTAATGGACCTGGCCAA GACGCTGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCAGCCGC TCGACCGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGCCAGGTAC ACCAGCTGGATCCGGGACAACTACGGGCGCTCGGGGCAGAAGGTGACCGC GCCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTGGGACAACA TCTCGGAGCGGACCATCCGCTCGTGCTTCAAGGTCTGCGGTCTCACCCTC AACCTCGACGGAAGCGAGGACCAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig180:92208..93781+

>mRNA_P-littoralis_Contig180.30.1 ID=mRNA_P-littoralis_Contig180.30.1|Name=mRNA_P-littoralis_Contig180.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig180:92208..93781+ (Pylaiella littoralis U1_48)
ATGGAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAA
GAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGAGGCAGAAGAAGC
CGGAAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCA
AGCCTGCGTGAGCACGCGCAGGAAGCCATCTTCGCCCTTCTGTACAACAT
GGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGA
AGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGAGAAG
CTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCG
GCCGCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGGTACCAACAACT
TCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGG
TGCGACGGCACCCAGTCCGACGAGTGGGTAACCCAGGACTTCATGCGCCG
CCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGACG
ACTTCAGGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCTAATGGACCTG
GCCAAGACGCTGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCA
GCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGCCA
GGTACACCAGCTGGATCCGGGACAACTACGGGCGCTCGGGGCAGAAGGTG
ACCGCGCCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTGGGA
CAACATCTCGGAGCGGACCATCCGCTCGTGCTTCAAGGTCTGCGGTCTCA
CCCTCAACCTCGACGGAAGCGAGGACCAC
back to top