prot_P-littoralis_Contig180.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig180.8.1
Unique Nameprot_P-littoralis_Contig180.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length194
Homology
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BLAST of mRNA_P-littoralis_Contig180.8.1 vs. uniprot
Match: A0A6H5JGM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 4.300e-38
Identity = 67/118 (56.78%), Postives = 82/118 (69.49%), Query Frame = 0 
Query:    3 RVAACGRSVHGKA-AAAGGLRLCYACDRPGSR-----KWKHMGDSEWWANLGAWSSREGKGWPHERDLQAHKLEVGECICSRADCVAGMYGTFKTRREKEERGSTDRMEIGWSSPMVR 114
            R A+CG+ VHGK  AAAG LR C+ACDRPGSR      W+H+ DSE+WA LG WS+  G+GW HERDL    L+ GECIC RADCV  +Y  +K RR++EE+G+   M IG  SPM R
Sbjct:    5 RRASCGKVVHGKEPAAAGELRRCFACDRPGSRDGCSTNWQHVVDSEYWAELGEWSATVGEGWTHERDLVGDPLKAGECICRRADCVVNLYQRYKGRRQREEKGALHTMVIGQRSPMGR 122
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BLAST of mRNA_P-littoralis_Contig180.8.1 vs. uniprot
Match: A0A6H5KE39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE39_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.180e-29
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 0 
Query:    7 CGRSVHGKAAAAGGLRLCYACDRPGSR-----KWKHMGDSEWWANLGAWSSREGKGWPHERDLQAHKLEVGECICSRADCVAGM 85
            CGR+VHGK A  GGL LC+AC RPGSR     +WKH+G + +WA +G WS+  G+ WPHERDLQ   L+VGECIC+R DC  G+
Sbjct:    9 CGRAVHGKEAPGGGLGLCFACGRPGSRDGCSSRWKHVGQTTYWAEVGEWSAMVGQEWPHERDLQGDPLKVGECICTRPDCAGGI 92
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGM7_9PHAE4.300e-3856.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE39_9PHAE3.180e-2958.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:48488..49675 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.8.1mRNA_P-littoralis_Contig180.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig180 48045..50084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig180.8.1 ID=prot_P-littoralis_Contig180.8.1|Name=mRNA_P-littoralis_Contig180.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp
MPRVAACGRSVHGKAAAAGGLRLCYACDRPGSRKWKHMGDSEWWANLGAW
SSREGKGWPHERDLQAHKLEVGECICSRADCVAGMYGTFKTRREKEERGS
TDRMEIGWSSPMVRYPSTSFQVRALLEHVELDGSILGCCGGETDVLYNVL
PAHGLPVATNDFNGGLRAGSHMDATTVEFAEAFLEDARRPDWS*
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