prot_P-littoralis_Contig180.110.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig180.110.1
Unique Nameprot_P-littoralis_Contig180.110.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length456
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 369..442
e-value: 5.2E-7
score: 31.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..138
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 369..391
score: 8.589485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:416386..424082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.110.1mRNA_P-littoralis_Contig180.110.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig180 416124..424518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig180.110.1 ID=prot_P-littoralis_Contig180.110.1|Name=mRNA_P-littoralis_Contig180.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=456bp
MGCLCGEDSVAFPVTDGTSRCRDREGGCWSLYLGGEDVLPCVWIRCWVST
DAWKDEAAILKPVFLVVVHRIPKWVRSLCSTLLGPAFSSDYAADGPTSPK
PQSRHHPDASVAHRSSSHGGGSNTGVGLVGNSHASEGETGSGLEADEVAR
QSGSSPHEMGVDDSNSSHSRGEDVVMGAGSFAVGSTSISQGQVGRTRRAT
QVSARDAERRRSAPPSVGGAAPAAARTRSSSTEGVAMRDGRKRRSAGDAR
PEPSRRVSRRGPVPACGTGACGDTADWSNPCQSCGNVSHIGKYLCSACHR
PTRVNGSGKATWRHFNEADLNEVDLWWPQVRPDVRTSLRGDYEPRKQCVC
SSSDCVAAAYDRFKKSTARNETRKCETCGTCSTPQWRKAGTRYGYMHSFF
DSGKGATHRHHYLRSTKGELTMESDVCNSCLLFFRVNSESGHGVGAKLEE
GRSML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA