prot_P-littoralis_Contig18.209.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.209.1
Unique Nameprot_P-littoralis_Contig18.209.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length156
Homology
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A6H5JCL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL9_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.470e-51
Identity = 108/156 (69.23%), Postives = 113/156 (72.44%), Query Frame = 0
Query:    1 MLSSCARRVVRTRCVQDLPRNVGAS-IPPACSRSTDSSSSSSGVDVIARGMAAKXXXXXXXXXXXXXXXXXXAGDAKDNKGEHGLGVTPINFLKDGKDPSVMPDEDYPEWLWNMQLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQNRSGKF 155
            MLSS +RRVV  RC + L R+VGA+     C R T          V ARGM AK         XXXXXXXXX        GEHGLGVTPINFLKDGKDPSVMPDE+YPEWLWNMQLPSLARLKR KEEDYTLDEFRRFVQLDSREKIKRQNRSGKF
Sbjct:    1 MLSSSSRRVVHLRCAEALLRHVGAAGSTTTCRRPT--------AGVSARGMMAKAGASAASGGXXXXXXXXXXXXXX--AGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRKKEEDYTLDEFRRFVQLDSREKIKRQNRSGKF 146          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: D8LS05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS05_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 6.500e-49
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 0
Query:   75 AKDNKGEHGLGVTPINFLKDGKDPSVMPDEDYPEWLWNMQLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQNRSGKF 155
            AKD+ GEHGLGVTPINFLKDGKDPSVMPDE+YPEWLWNMQLPSLARLKRTKE+DYTLDEFRRFVQLDSREKIKRQNRSGKF
Sbjct:   26 AKDSAGEHGLGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF 106          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A8B8ZE54_PHODC (uncharacterized protein LOC103718685 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8ZE54_PHODC)

HSP 1 Score: 72.0 bits (175), Expect = 3.140e-13
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 0
Query:   90 NFLKDGKDPSVMPDEDYPEWLWNM---QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            N LKDG DP +MPD DYP+WLW++   +LP L+ L+R   E  TLD+ RRFV+LD+R +IK  N
Sbjct:   64 NILKDGADPKIMPDSDYPDWLWHLLDKRLP-LSELRREGTETLTLDDLRRFVKLDNRARIKENN 126          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A6I9RSS1_ELAGV (54S ribosomal protein L37, mitochondrial n=3 Tax=Cocoseae TaxID=169705 RepID=A0A6I9RSS1_ELAGV)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-12
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   90 NFLKDGKDPSVMPDEDYPEWLWNM--QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            N LKDG DP +MPD DYP+WLW++  + P L+ L+R   E  + D+ +RFV+LD+R +IK  N
Sbjct:   65 NILKDGADPKIMPDSDYPDWLWHLLDKRPPLSELRRKDTETLSFDDLKRFVKLDNRARIKENN 127          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: Q9S799_ARATH (F28J7.7 protein n=11 Tax=Brassicaceae TaxID=3700 RepID=Q9S799_ARATH)

HSP 1 Score: 70.1 bits (170), Expect = 1.510e-12
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   86 VTPINFLKDGKDPSVMPDEDYPEWLWNM--QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            V   N LKDG DP ++PD DYP+WLW++  + P+L+ L+R   E    D+ +RFV+LD+R KIK  N
Sbjct:   54 VVGANTLKDGSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRGKIKENN 120          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A7I8KFI9_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KFI9_SPIIN)

HSP 1 Score: 70.1 bits (170), Expect = 1.580e-12
Identity = 40/97 (41.24%), Postives = 51/97 (52.58%), Query Frame = 0
Query:   72 AGDAKDNKGEHGLGVTP----------------INFLKDGKDPSVMPDEDYPEWLWNM--QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            AG AK  KG  G G  P                 N LKDG DP VMPD DYP+WLW +  + P L+ L+R K E  + +E +R  +LD+R +IK  N
Sbjct:   26 AGGAKAKKGSKGAGDAPKASTISNEVKASTVVGANILKDGVDPKVMPDADYPDWLWRLLDKRPPLSELQRRKPETLSYNELQRLTKLDNRARIKENN 122          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A4D8Y8A9_SALSN (Large subunit ribosomal protein L54 n=6 Tax=Salvia TaxID=21880 RepID=A0A4D8Y8A9_SALSN)

HSP 1 Score: 69.7 bits (169), Expect = 2.440e-12
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 0
Query:   90 NFLKDGKDPSVMPDEDYPEWLWNM--QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            N LKDG+DP ++PD +YP+WLW++  + P+L+ L+R   E    DE +RFV+LD+R +IK  N
Sbjct:   64 NILKDGQDPKILPDSEYPDWLWHLLDKRPALSELRRKDTETLPFDELKRFVKLDNRARIKENN 126          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A6J0NPD7_RAPSA (uncharacterized protein LOC108857114 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0NPD7_RAPSA)

HSP 1 Score: 69.3 bits (168), Expect = 2.920e-12
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   86 VTPINFLKDGKDPSVMPDEDYPEWLWNMQ--LPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            V   N LKDG DP ++PD DYP+WLW +    P+L+ L+R   E    D+ +RFV+LD+R KIK  N
Sbjct:   53 VVGANTLKDGSDPKILPDSDYPDWLWRLLHIRPALSELRRKNVETLPYDDLKRFVKLDTRSKIKENN 119          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A6A6MX44_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MX44_HEVBR)

HSP 1 Score: 67.8 bits (164), Expect = 3.550e-12
Identity = 30/67 (44.78%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   86 VTPINFLKDGKDPSVMPDEDYPEWLWNM--QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            V   N LKDG DP ++PD +YP+WLW++  + P+L+ L+R K E    ++ +RFV+LD+R +IK  N
Sbjct:    6 VVGANILKDGADPKILPDSEYPDWLWHLLDKRPALSALRREKIETLPYEDLKRFVKLDNRARIKENN 72          
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Match: A0A6A1VFZ0_9ROSI (Uncharacterized protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VFZ0_9ROSI)

HSP 1 Score: 69.7 bits (169), Expect = 4.450e-12
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   86 VTPINFLKDGKDPSVMPDEDYPEWLWNM--QLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN 150
            V   N LKDG DP V+PD +YP+WLW++  + P+L+ L+R K E    D+ +RFV+LD+R +IK  N
Sbjct:   87 VVGANILKDGADPKVLPDSEYPDWLWHLLDKRPALSELRRKKIEALPYDDLKRFVKLDNRARIKENN 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCL9_9PHAE1.470e-5169.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS05_ECTSI6.500e-4995.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8B8ZE54_PHODC3.140e-1354.69uncharacterized protein LOC103718685 n=1 Tax=Phoen... [more]
A0A6I9RSS1_ELAGV1.260e-1249.2154S ribosomal protein L37, mitochondrial n=3 Tax=C... [more]
Q9S799_ARATH1.510e-1247.76F28J7.7 protein n=11 Tax=Brassicaceae TaxID=3700 R... [more]
A0A7I8KFI9_SPIIN1.580e-1241.24Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A4D8Y8A9_SALSN2.440e-1247.62Large subunit ribosomal protein L54 n=6 Tax=Salvia... [more]
A0A6J0NPD7_RAPSA2.920e-1247.76uncharacterized protein LOC108857114 n=1 Tax=Rapha... [more]
A0A6A6MX44_HEVBR3.550e-1244.78Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A6A1VFZ0_9ROSI4.450e-1247.76Uncharacterized protein n=1 Tax=Morella rubra TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 86..113
e-value: 3.4E-8
score: 34.0
IPR013870Ribosomal protein L37, mitochondrialPANTHERPTHR2859539S RIBOSOMAL PROTEIN L54, MITOCHONDRIALcoord: 51..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:899589..902369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.209.1mRNA_P-littoralis_Contig18.209.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 899521..902999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.209.1 ID=prot_P-littoralis_Contig18.209.1|Name=mRNA_P-littoralis_Contig18.209.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
MLSSCARRVVRTRCVQDLPRNVGASIPPACSRSTDSSSSSSGVDVIARGM
AAKAAAGGGKKGGGKGKGGGGAGDAKDNKGEHGLGVTPINFLKDGKDPSV
MPDEDYPEWLWNMQLPSLARLKRTKEEDYTLDEFRRFVQLDSREKIKRQN
RSGKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013870Ribosomal_L37_mit