prot_P-littoralis_Contig18.164.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.164.1
Unique Nameprot_P-littoralis_Contig18.164.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length579
Homology
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BLAST of mRNA_P-littoralis_Contig18.164.1 vs. uniprot
Match: A0A6H5JS47_9PHAE (Btz domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS47_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 3.890e-23
Identity = 76/133 (57.14%), Postives = 85/133 (63.91%), Query Frame = 0 
Query:  410 ARGGSPMPP--HPGGSTPILVGQSMA----MGMPPVGGIGVDAGGAGDMQMQGIFNPAAAGYFVTPGGQQLPMHMAAEMSAAG--------VGGGSWFPERQQQQPQHSSPVLVPWNAAGDGPEAAGAAAPSA 528
            AR GSPMPP  H  GS PILVGQSM     MGMP   G+G+   G GDMQ+QGI+NPAAAGYFVTPG QQLPMH+AAEM AA               +P+   Q  QHSSPV VPW+ AG+G      AAPSA
Sbjct:  791 ARDGSPMPPLPHASGSPPILVGQSMPGVQQMGMP---GVGMGVAGPGDMQIQGIYNPAAAGYFVTPGAQQLPMHVAAEMVAASGXXXXXXXXXXXXXYPD---QXXQHSSPVPVPWSVAGEG------AAPSA 911
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JS47_9PHAE3.890e-2357.14Btz domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 489..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:714016..717485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.164.1mRNA_P-littoralis_Contig18.164.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 714016..717485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.164.1 ID=prot_P-littoralis_Contig18.164.1|Name=mRNA_P-littoralis_Contig18.164.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=579bp
GTAAARTTSAAANGNSKPGEAGGSWAPATPDAGAWGTATSVNQNQNQNQN
AGGWGGGKISPGGVGDGSGRGGRGGRGRGSKTYVNSGGGMGANGGERGGG
GRDTSRGGRGGGGRGGVNAQVPRVTPAAAATPSKPSTLTANAKQWTGQPG
TAAATAAPATTSAAGAAGTAATPPATAAAAAASVASTTVPGKPLPSASAE
APAAASAGEDFSGVQVEPGFAPPARAVTGVPVILGEATVGVAGTAASALA
HLSPEQRAFFLHAQQQQLAQQVQQMQQVQLIQAHQALRNQQLQQQDEFFR
RQQQQKQGGTLQLDSGSTQQQQDEHARQQQHQQPHQQQHHSPLQQPGVHI
VSPTPPLAGGPPPQPQQNVSAGPPKIAEYHSSSTPPPPSALMPPVPNPEA
VAAAMQQQHARGGSPMPPHPGGSTPILVGQSMAMGMPPVGGIGVDAGGAG
DMQMQGIFNPAAAGYFVTPGGQQLPMHMAAEMSAAGVGGGSWFPERQQQQ
PQHSSPVLVPWNAAGDGPEAAGAAAPSAVLADDVMLPPQADSWMRAAVQQ
ELLREQMQEQAVAQQFHQQQQQQRYAAAV
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