mRNA_P-littoralis_Contig18.149.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig18.149.1
Unique NamemRNA_P-littoralis_Contig18.149.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 545 bits (1403), Expect = 5.990e-167
Identity = 298/478 (62.34%), Postives = 362/478 (75.73%), Query Frame = 1
Query:    7 GSGPNVELDASIWDFAGQRAYHDTHQ---------------------HSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQP-DLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ-TMFTRISKFFRHEHE-RRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQE-IEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 1365
            GSGPNVELD S+WDFAGQRAY+DTHQ                      SREDAL QWL+IL  RVPGSVVLLVGTH+D F  ++ +C  RT  F++DV++ + R R EC SAK   E E  +G   DL+   R+QPLRVV++E++L+L+L SSDGQDID+LQ+R+EHLAY+G++ + F SV SVVPEPYLPA+ATLEAVRRGADLRGSG TR  VA+RLGE G+ +KRRSF++FSEA+SLF +Q+ +MF+R+S  FR   E RR+F  A++ HE HGAILLT VD GGG QE+   G GAA    +L+IHVNPS+FAD VRRVVDVR  + +    V+E +EA +SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM LG+ SQEA PLEMSE D+ V+VGSLL +RFMYRVRDG  AF+ DR+VVASCL NKAG  VD  KILELK G AI+S+ LKLVGAHAVPPGLV R LA
Sbjct:  408 GSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTEGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGE-GDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLA 884          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 511 bits (1317), Expect = 1.490e-157
Identity = 286/499 (57.31%), Postives = 351/499 (70.34%), Query Frame = 1
Query:    7 GSGPNVELDASIWDFAGQRAYHDTHQ---------------------HSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ--TMFTRISK----------------------FFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAE-LQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 1365
            GSGPNVELD S+WDFAGQRAY+DTHQ                     HS EDA+ QWLDIL  RVPG+V+LLVGTH+D F  ++ +C +RT  F++DV+  + R   +C SAK  AE E  +  PDL+    ++PLRVV+EED+L+L+L SSD +DI +LQ R+EHLAY+G++ + FSSV SVVPEPYLP +ATLEAVR GADLRGSGGTR  V +RL  EG+  KRRSF++FSEA+SL  +QQ  +  +R+S                       F R +  RR+F  AI+ HE +GAILLT VD GG  QE+   G GAA    +L+IHVNPS+FAD VRRVVDVR  +  Q   V Q + A  SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM+LGQ S EA PLEMSE D+ V+VGSLL +RFMYRVRDG DAF+ DR+VVASCL NKAGP+VD  K+LELK G A++S+ LKLVGAHAVPPGLV R LA
Sbjct:  113 GSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAEGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRL-REGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLA 610          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 451 bits (1161), Expect = 2.330e-135
Identity = 268/498 (53.82%), Postives = 324/498 (65.06%), Query Frame = 1
Query:    7 GSGPNVELDASIWDFAGQRAYHDTHQ---------------------HSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQR-------------------DVDDFINRNRSECASAKAYAECESSKGQP-DLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ--TMFTRISKFFRHEHE-RRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRW-AELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 1365
            G GPN ELD S+WDFAGQRAY+DTHQ                      S+EDAL QWL+IL  RVPGS++LLVGTH+D F  ++ +C  RT +F+                    DVDD + R R EC SAK  AE E  +G   DL+   R+QPLRVV+EED+L+LNLASSD QDID+LQ R+E+LAY+G                             GADLRGSG TR  VA+RL  EG  +KRRSF++FSEA+SLF  QQ  +M + +S  F  ++E RR+F  A++ HE HGAI LT VD GGG QE+   G GAA    +L+IHVNPS+FAD VRRVVDVR  A  Q + V + +EA   VRS LL L++QHKRF+K GEVSK+YLKFLW RDM L + SQEA PLEMSE D+ V+V SLL +RFMYRVRDG  AF+ DR+VVASCL NKAGP VD  KILELK G AI+S+ LKLV  HAVPPGLV R L+
Sbjct:  153 GIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYEVGQSKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNG-----------------------------GADLRGSGSTREAVAQRL-REGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS 620          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 2.610e-96
Identity = 228/488 (46.72%), Postives = 296/488 (60.66%), Query Frame = 1
Query:   10 SGPNVELDASIWDFAGQRAYHDTHQ----------------------HSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRD-----VDDFI-NRNRSECASAKAYAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVE---QQTMFTRISKFFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVR---SVLLPLSEQHKRFVKAGEVSKEYLKFLWR-RDMKLGQGSQE-AQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 1365
            SG N ELD  +WDFAGQRAY+DTHQ                      HSREDAL QWLDIL  RVPGSVVLL+GTHSDSF   + +C +R   F +        +FI  R   EC +A       + +G   +QD RR++PLRVV+ +++L+LNL+ S G     L+E IE +AY   + + F SV + VPEP+L AVATLEAVRRG  LRGSGG  AEVARRL    +  +   F+ F EALS F+E   ++ MF       +     RVF  AI+LHE  GAILLT  D GGG  E++A+       E +LVIH+NP+ FAD +RR+VDVR   L  +   QE  A    R   + +  LS+QH RF  AGE+++ Y++FLW+ RD++LG  S   A PLEMSE+DI  IV SLL +RFM+RVR       +D ++V SCL +  G  +D  K++EL+ G AI SR L+ VGAH+VPPGL+ R LA
Sbjct:  102 SGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPA-ECSKRVDCFVKGELLPLYKNFIMKRIGDECKAA-------ADRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGG-----KATEGARVFLAAIKLHEVQGAILLTRAD-GGGEMEDMAS-------EEHLVIHMNPAWFADLIRRIVDVRL--LDPAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQN-----EDHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLA 561          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 5.530e-93
Identity = 232/487 (47.64%), Postives = 291/487 (59.75%), Query Frame = 1
Query:    7 GSGPNVELDASIWDFAGQRAYHDTHQ----------------------HSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQPD-----LQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGES-EKRRSFIKFSEALSLFVE---QQTMFTRISKFFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWR-RDMKLGQGSQE--AQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 1365
            GS  N ELD  +WDFAGQRAY+DTHQ                      HSREDAL QWLDIL  RVPGSVVLLVGTHSD F   +          +RD+ D + R   EC SA+  A  ES+ G  D     +QD RR+QPLR+V+ +++L+LNL  S G     LQE  E +AY   + + F SV S VPEP+L AVATLEAVRRGA LRGSGG  AEV RRL  +GE  ++ + FI F EALSLF+E   ++++F   +         + F  AI LHE  GAIL+T  D GGG +E++   +     E +LVIHVNP+ FAD +RR+VDVR  +      + E+    S  SV   LS+QH RF  AGEVSK Y+KFLW+ RD++LG  S    A P EMSE+ I  +V SLL +RFM+RVR       +D ++V SCL +  G  VDA K+L L  G AI SR L+L G   VPPGL+ R LA
Sbjct:  273 GSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPA-------DCSKRDIMDRVGR---ECKSARERARQESA-GNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRL--DGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNAT-----EGEQAFLAAITLHERQGAILVTRAD-GGGEKEDMKPAS-----EQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSPASVA-ELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHN-----KDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLA 729          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 7.590e-54
Identity = 122/220 (55.45%), Postives = 146/220 (66.36%), Query Frame = 1
Query:  706 RHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 1365
            R +  RR+F  AI+  ETHGAILLT VD             GA     +L+IHVN S+FAD ++              V + +EA  SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM+LGQ SQEA  LEMSE D+ V+V S L +R +YRVRDG  AF+ DR VVASCL NKAGP+VD   ILEL+   AI+ + LKLV AHAVPPGLV R LA
Sbjct:   20 RDDEPRRIFLAAIKSQETHGAILLTGVD-------------GA-----DLIIHVNLSRFADLLK--------------VKEAMEACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAGPEVDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELA 207          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 4.540e-51
Identity = 129/305 (42.30%), Postives = 166/305 (54.43%), Query Frame = 3
Query: 1710 SLREDVAFIRWPILRLVCVLPAPENEK----ELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAAVTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAYE-LTDIMKDFEMDG-RRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQFKS 2606
            SL  +VAF+ WPI  L+CVLPA E+      E DRSFE WS  L++  + G   GRG+ATQKLR+FFLC  D+SLAECGP GQ Y+   LL WAKKAK  A++GL LA I  K+C GLA+P+  +E  LG  AGG LS  V ++L S VE MA+VAGE LE   PA+ + HAGA R               +E++  R                                           RP P+QGFAY+ L ++++ F++D  ++G SP  SFD TM+ VDR G G EWA V      Q+ S
Sbjct:  874 SLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHHAGACR---------------LEREKMR-------------------------------------------RPTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPSFDKTMQLVDRGGRGVEWAWVRRRNVDQYVS 1120          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 8.630e-48
Identity = 121/291 (41.58%), Postives = 145/291 (49.83%), Query Frame = 3
Query: 1353 AVSGPAPGRIKECRKR*VCFNFKNHLALLYELQHGDGDAWIECHVRGGVHDESARSVLKDVGDQLHELVTDRKYGFPGLGLIRSE-EETVFASQLECEVLAERFAIVLKDQINVKFRMDRSLREDVAFIRWPILRLVCVLPAPENE----KELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQH 2210
            A  G   GR KEC KR +    K HL LL EL+   G +WIEC +RG + DES   VLKD   Q+HEL +D KYGFPGLGL   E  ET F    + + L ER   +L+DQ NV               RWPIL   CVLP PE++    +E++RSFE WS  L+     GK   +G AT+KL +FFLC  D SLAECGP GQ                         E+ F             E   G   GGA STLV +SL SG E +AS A E L+   P   LQH
Sbjct:   57 AWCGRGEGRYKECCKRGLLLEIKKHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGLSYDEVSETDFDLDGDDKALVERIKSILRDQTNV---------------RWPIL--ACVLPTPESDVKPLEEINRSFEGWSTVLRSCCRDGKKQRKGFATRKLWMFFLCPVDRSLAECGPGGQG-----------------------CEVDF-------------EATPGTRPGGAFSTLVEESLDSGGEALASSAEERLDGGWPKGPLQH 294          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.230e-39
Identity = 115/322 (35.71%), Postives = 149/322 (46.27%), Query Frame = 3
Query: 1710 SLREDVAFIRWPILRLVCVLPAPENE-KELDRSFEAWSAKLKEWSAGGKIAG-------------------RGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERER---PADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAAVTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAYE-LTDIMKDFEMDG-RRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQF 2600
             +  +VA +RWPI R VCVLPA +    E DRSFE WS  LKEW A    A                    RG+ T++LR+FFLC QD SLAECGP GQ YE K  L W +KA  +AK+GL LA I  K+C GLA+ ++  E A G      +S  V D+L +G+E   S AG  L+R +   P++ L HAG    G+  ++                                                             PL+GF Y+ L +++K FE+D  +R  S + SFD TM  VDR G G EWA V N    QF
Sbjct:  878 GVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSED--MSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTLI-------------------------------------------------------------PLEGFDYDKLKEVIKSFEVDRTQRDGSRYPSFDTTMNIVDRRGHGVEWAWVRNRNIDQF 1136          
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.410e-23
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = 3
Query: 1710 SLREDVAFIRWPILRLVCVLPAPEN-EKELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQHAGAH 2222
            S+ ++VAF+RWPI RLV +L AP++ E  L        AK           GR + T+KLR+FF  +   SLA CGP G       LL WAKKAK +AKVGL +A I  K+CIGLA+P   L  A G   G  ++ +V ++  S +++M S AG  +E     + L+HAG +
Sbjct:  225 SIAQNVAFMRWPIPRLVWLLLAPDSGEPALTAEQRCNQAK-----------GRRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIALKVCIGLAIPRMDLNAAFGASTGDVVTGVVEEAATSSIDSMTSAAGGRIESGGQTERLEHAGVN 383          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FU35_ECTSI5.990e-16762.34LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE1.490e-15757.31Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE2.330e-13553.82Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE2.610e-9646.72Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE5.530e-9347.64Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXU4_9PHAE7.590e-5455.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG1_ECTSI4.540e-5142.30LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K561_9PHAE8.630e-4841.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUH6_ECTSI1.230e-3935.71LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5JXK6_9PHAE4.410e-2340.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:688152..696525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FU35
PFAMsLRR_8,Roc
Model size4371
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue4e-69
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
Descriptionregulation of response to stimulus
Cds size912
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.149.1prot_P-littoralis_Contig18.149.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig18 689911..693502 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789867.0307696-UTR-P-littoralis_Contig18:688151..6899101680789867.0307696-UTR-P-littoralis_Contig18:688151..689910Pylaiella littoralis U1_48UTRP-littoralis_Contig18 688152..689910 -
1680789867.108172-UTR-P-littoralis_Contig18:693502..6949701680789867.108172-UTR-P-littoralis_Contig18:693502..694970Pylaiella littoralis U1_48UTRP-littoralis_Contig18 693503..694970 -
1680789867.1178942-UTR-P-littoralis_Contig18:695998..6961461680789867.1178942-UTR-P-littoralis_Contig18:695998..696146Pylaiella littoralis U1_48UTRP-littoralis_Contig18 695999..696146 -
1680789867.1283104-UTR-P-littoralis_Contig18:696441..6965251680789867.1283104-UTR-P-littoralis_Contig18:696441..696525Pylaiella littoralis U1_48UTRP-littoralis_Contig18 696442..696525 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789867.0419416-CDS-P-littoralis_Contig18:689910..6902821680789867.0419416-CDS-P-littoralis_Contig18:689910..690282Pylaiella littoralis U1_48CDSP-littoralis_Contig18 689911..690282 -
1680789867.0737052-CDS-P-littoralis_Contig18:690396..6906811680789867.0737052-CDS-P-littoralis_Contig18:690396..690681Pylaiella littoralis U1_48CDSP-littoralis_Contig18 690397..690681 -
1680789867.084195-CDS-P-littoralis_Contig18:692132..6923491680789867.084195-CDS-P-littoralis_Contig18:692132..692349Pylaiella littoralis U1_48CDSP-littoralis_Contig18 692133..692349 -
1680789867.0938704-CDS-P-littoralis_Contig18:693464..6935021680789867.0938704-CDS-P-littoralis_Contig18:693464..693502Pylaiella littoralis U1_48CDSP-littoralis_Contig18 693465..693502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig18.149.1

>prot_P-littoralis_Contig18.149.1 ID=prot_P-littoralis_Contig18.149.1|Name=mRNA_P-littoralis_Contig18.149.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=304bp
MDRSLREDVAFIRWPILRLVCVLPAPENEKELDRSFEAWSAKLKEWSAGG
KIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSA
KVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVET
MASVAGENLERERPADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAA
VTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAY
ELTDIMKDFEMDGRRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQF
KSK*
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mRNA from alignment at P-littoralis_Contig18:688152..696525-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig18.149.1 ID=mRNA_P-littoralis_Contig18.149.1|Name=mRNA_P-littoralis_Contig18.149.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8374bp|location=Sequence derived from alignment at P-littoralis_Contig18:688152..696525- (Pylaiella littoralis U1_48)
GCTACAGGAAGCGGGCCAAACGTCGAGCTAGACGCGAGCATCTGGGATTT TGCTGGCCAGAGAGCATACCACGACACGCACCAGGTGGGAGGTTTCATAC AGCTAAATGTGAGACCAACATTTTCGCCGCCCATTGGTGATGGAGCAAGC CTACTACTGCTCTCGATGACTTACTGAAGGGGTGGGAGATGAGTGTTATT TGGAATGCGTTAGGTTGTCTCCTGTTCGCGGTCTCCTTTTCACACTAACG TTGTCATATACGCATACACATGCATACGTAATGCTACCGCTCTTCACGCT GCCCCGCTGTACCCAGTTATTCCTCACCCCATGCGCTCTTTTTATCCTGG TCGTGGACATGTCCGCGTATTCGGACAAGCACTCCCGGGAAGATGCGCTC CACCAGTGGCTTGACATCCTGCCTTTCAGAGTCCCCGGTTCCGTGGTTTT GCTCGTGGGGACGCACAGCGATTCGTTTGGAGGGGATTCCGTCAAGTGCA GGGAGCGAACGGGTGCCTTCCAGAGAGGTGGGTCGTGGGGGCGAACCGTT GCGATCTACGTTGCGTAAAATGATTAATGGCTTTGTCGTTTACCATAAAT CAACAACCCAAAAATTTGGTGTCATAGCCAGTGAGGGTGCACTTCACTGG GTGACTCACACTTTCGGCAGTTTTCATAAAAGGCCCATGGGCGGCCCATG GGCACATTATAAAACTGCCCATGGGCGTGCTCACAGGCGTTCCACGAGAA ATGCTCATGGACATGCTCATGGGCGGCCCGCGAGCGGCCCATGGGTGGCC CATGAGCGTATTTTTCTCTGAATTTTGGGCGGTCCATGAGCGTGAGTAAG GTTTGAGATCGCTGCGGCCTTGGTAAGGTCCTATTTTTCTCGTCAGTGTT GGATCACAGTAAGCCGCGGCAAACGTTTTTAAGCCTAACCCTAACCCTGA CCCAACCCCAATCAACCCTGGATGGGCCTTGGTGAGGTTCTAGGTCGCTG CGGCCTTCCTAAAGTGCTAGGTTACCGTGCGGGGGGCTGGGTTAGGCCGT GGCGGCGGACTCGCCGTGGGGTTCCCATGAGGTGCCCATGGGCATGCTCA CGGAAGGCTCATGGGCGGCTCATGGGCTTTTTATGAAAACTCCCAGTGTG GGAGATTGACTTCACTTGCTTGACGTGGCTTGATCAAGCTCGGCTCCACA CAGCCACTCTGCTTGAAACACACTTGTGTAAAATGTGGCAAGGATAAAAG CTGTCGCTGGTCCCGCGTGAACACGGGCTGAGCGGTGACCGATTGTTGAC TTAATATTACTCGGGTGTTGATGCGCCGGGGGCTCATCCTTTGAGACAAG CAAGTGGCGCCTTCGGATTTTGTACTTGTTGGGTTCATCGGCTTTCGCCC CTGTTGATTTTTCCTGCCGATGGTAACACGTTCATTTTCTGCACACCTCT CGTGGCGAAATGCTGCGGCCGGTTTGTATCCAAGAGCCCGGCTGCATAAC GGCTTCCAATGATCCTGCGTTTGCCAACGTTACCTTTTTTTCCGGGGAAA AACAGATGTGGATGATTTCATCAACCGGAATCGCTCCGAATGCGCCTCAG CCAAAGCATATGCAGAATGTGAATCGAGCAAGGGGCAGCCGGACTTGCAG GACAAGCGCCGCTTCCAACCCCTTCGCGTTGTCATGGAAGAGGATATGCT TTCTCTTAACCTCGCGTCCTCGGACGGGCAAGATATTGATATGCTTCAGG AGCGCATCGAGCACCTTGCCTACAGCGGCTTCGAAGACCACTTGTTCTCT TCCGTAATGAGCGTCGTACCTGAACCTTATTTGCCAGCCGTCGCAACGCT GGAAGCAGTTCGTCGTGGAGCGGATTTGCGTGGTTCGGGCGGTACACGAG CCGAGGTAGCGAGAAGGCTTGGGGAGGAGGGGGAGTCCGAGAAAAGACGC TCGTTCATAAAGTTCTCAGAGGCCCTGTCGCTTTTCGTCGAACAGCAAAC CATGTTCACACGGATTTCCAAGTTTTTTCGCCACGAACACGAACGACGTG TGTTTCACGACGCCATCCAGTTACACGAGACTCACGGTGCGATTCTTCTG ACCGCGGTTGATGAAGGCGGGGGTGGTCAAGAGGAACTTGCAGCCGGCAC TGGTGCTGCGACATACGAAGGTAACCTCGTCATCCACGTGAATCCGTCCC AGTTTGCTGATGCGGTTCGCCGAGTTGTCGACGTTCGGTGGGCAGAGCTG CAGTAGTCAATGGTAGTCCAAGAGATTGAGGCATCGTCGTCGGTAAGGTC GGTGCTTTTACCCCTCTCAGAGCAGCACAAGAGATTCGTCAAGGCTGGAG AGGTGAGCAAGGAATATCTCAAATTTCTGTGGCGCCGAGACATGAAGCTG GGTCAGGGAAGCCAAGAAGCGCAACCTCTCGAAATGTCGGAAGACGACAT TCGCGTGATTGTGGGCAGCTTGCTTCACATCCGGTTCATGTATCGGGTAC GGGATGGTCCCGATGCCTTCTTGCAGGACCGCTTCGTTGTCGCAAGCTGT CTTGCGAACAAAGCCGGGCCTCAGGTGGACGCAGCAAAAATTTTGGAGCT GAAGCCCGGATGCGCGATACACTCGCGGGTGCTGAAGCTTGTTGGTGCGC ATGCCGTGCCCCCTGGACTGGTAACGCGGTTTCTGGCCCCGCGCCAGGGC GCATCAAGGAATGCCGGAAGCGATGAGTTTGTTTCAACTTCAAGAACCAC TTGGCGTTGCTGTATGAACTCCAGCACGGTGATGGGGACGCTTGGATTGA GTGCCACGTAAGGGGGGGTGTTCACGACGAGAGTGCGAGGAGCGTCTTGA AGGACGTCGGCGACCAGCTTCACGAGCTGGTCACCGACCGCAAGTACGGG TTCCCCGGCCTTGGCCTCATCCGTAGCGAAGAGGAAACGGTTTTCGCCTC GCAGCTTGAGTGCGAGGTCTTAGCGGAGCGGTTCGCGATTGTCTTGAAGG ATCAGATAAACGTCAAGTTCAGAATGGATAGGAGCTTGAGAGAGGACGTG GCCTTCATACGGTGAGCGAATCGAACAAAGAGGTATTGATTTATCGCTTT GATTAATCCCGGTATTACTTTTTGCGCCCCATATTCGTTTCAGGGTTCAA AATTCTAGCCCACAAGTCACCCGACGAATACACCATCATTCCCTCAAACC AGTCTACGTACGCTTGGTCGCCTTTCCGCTGTGTTGTGGTTAGGTTGCAA CACTCCTGTTGTACCGTACTACAGCAAAGGCATTTCCCGCAACATGGATA GTCTGCATTTGTACGAGCCCACGACTCGAAAGCAAGAGGGGGCGTTTTTT TTTTACCATCGCATTTTCCGGTCAGTCCATTTAGTTAGTTGGCGTCGAGG GCGTTGCACCACGTACGTTGAAGATTTGCAAGGTGCCGTGCGACATTAAT TTTCTCGTTTTCCTCCTGTGTGGGCCGTGTCATTGGTTTGTATTAAAGGA CGGGCTGTGAAATCTTGAAATATATTGCACGCCAGGCCCGACCACTCCGC CTCCTTTGTCGAACCTTGTGCAACGCGGAGGGGCTCCGCTGCGTGAAATC CAATGTAGGAAATTGAGTACCCTGCTCTTCCAACCGTTAGCAAATTGAAA GTACTCCGCATCCCCGCACCCAAATCAACGGTTTGCACCACCCCATACAG AGTGAAGAAAGCGAGAGCCGTGTCACAGCTCTATTCATTGGCTACCTTAT TTCTGGCGTCGAATAGCAGCAAAGGTGGTCGTGTGCGCATGGCATTTGGT GCTGTATAGTGCGGCGGTGCAGGCAAAAAACGCCAACACACGCGGTCGAT CACCCTCATAGCAGGAATTTATGCTTGACTACTGTAGCGCTGCCGCGATA CGGGCGGCGACGTCCCCAATCTCCACCAGCTAGGTGGTCGTGATCACGCC CTCTCCCCACCGGTCATGCGTGAGAAATTGAGCAGGGAACGGATTGCTCC TCAAGTCATATTTTGAGCAACAACTTGATGTTTCGGATTCTCGTTCCATC TCACGGCGGCATCTACGTGGCTGGTTTGATTAAACAGAAACGTCTTCGAG GAAAAGCATGCTGCCTGAGCTTGCGTTCCTTCGCTGATATATCAATGGAA CTTTTTTTTGTCTTTGGGATGTGCAGGTGGCCGATCCTTCGCCTAGTGTG CGTGCTGCCCGCCCCCGAGAACGAGAAGGAGTTAGATAGATCGTTCGAGG CATGGTCGGCCAAACTGAAGGAGTGGTCCGCCGGCGGGAAAATAGCAGGG AGAGGGATTGCAACGCAAAAGCTGCGTGTGTTCTTCCTCTGCGCGCAGGA TCTGAGCCTCGCCGAGTGCGGGCCCAAAGGGCAATGGTACGAGGTGAGTA CTATCGAACAAAGCAAAAGTTGCGTGTCCCCCTTGCTTGGAATAACAATT TTCTTGTTGTCCGGTATCCTTCCGTCATTTATAACTCAAACGGCAGCAAT TTATTTTCGGGATCACCGAGAGCGCTCCATTCCACAGGTTCGAGTGTTCA CAGCCCTGCATTTGGTAATTTTCAGGTGGCCATAAAGAACGAAGGAGGGA AGAAAAATAATCGGGAAAAGTTTTGTTACTTGTTAGGGTGGCGGGTTTAG AACCCAGCGCATGGCACTGTCGGCAAGGTCAGCCTGTGTTCCGCTCAACC ACCGAAAATAATTGAAATGAACGGCGAATTTATCGCATGTGCAAAGTGGA ATTGACTGTTTTCTGTGTCCACTGATTGATTTCGTGGCACTCGAGGAGAG AGGTCAACTAGCTTCTGTCTACCAAGTGTTTTAACTTCGAAGTTTCAAGT TTGTGTCCGTCTCTTTACTCGACTTCTTAAATCAAAAGAAAAACGGTGCC GTCAAGAATTTTACGTCGGTAGGGTCGTGTCTTCCGGTTTTGGAAATCCA GCAATTTTTGTCGAGAACAAATTCTAGCCGAAACACGTCACTCGGAAACA GCTCGTTTCTCGCGGTTGGTGAGCTTGATATCACAGCTTGTGGGGAAGAG GAGGTGGCTCTCCTCATTTCACTTTGGAGGCACAGGTCCCGATTCCGTAA GGAATACTGACCGTAGAGCACACATCGAGAGCTCCCACCATCTCTAGGTT CCAGGCACTGCTGCGCTGGTCGCTGATCAGTGTCGGTCGCTCGTCAGGAG ACCAAAAGGTTTTTTTTCGCACGCCTGACAAGCGACCAGAGCCGCAGTGC TTTTATCCTAGGTATGGCGGGAGCCCTTGCTGAGCGCGACGTTCAGAATT TGTGTCGCAGCAGTTCTGCTCTGACACAATATCCCAAACATTAAAAATCC AAGTCGATAATTTTCCTCGGTTTCCACATGGATCTTCCTCCAAAGTCCAA CAAGCCGACAGCCAGGATGTCAGATTATTTCGCTCGACTTGGATTTTGGT TTTGGAATTTTGGTGGTTTCCCAAACCGCAAGGAGCCATTCGAGATTTTC TTGTTGGTTTAGTTCGTTTTTCTCTGAATTTCCCAACCGCGAGAAATGGC CTGAGCGTGGAAGTCTGTCCAAATGCTCTTTTGAGCGCTGAAACAACTGT CTTGGTAAACATCCCGCACCTGGGATCAGTGACGGCGCATCCTGCCGATA TGGTCATATGTTGTGCTCTCCCCCCGTATTTCCTCCTTGCCGTCATTGTA GAGAAAAGTTTGATGTCTCATGATGAGTGACTTTGAAGTGGCAGCTGGAA AGAATGCTTCGTTTGCCTCGTGTCTGCGGAAATGAACCGATCTTACTCGT GAAAGCTCGACTTACACTCACACCTTAACTCCATCATTGATCAGGCGAAG GTGTTGTTGAAGTGGGCGAAGAAAGCGAAGCGGTCGGCGAAGGTGGGATT GTTCCTCGCCGAGATCGTGTTCAAACTGTGCATCGGCCTGGCACTTCCTT CTAACATGTTGGAGACCGCACTTGGGATAGAAGCCGGCGGTGCCTTATCC ACGTTGGTCACGGACTCGCTAGGCTCGGGCGTCGAGACGATGGCGAGCGT CGCCGGGGAGAACCTGGAAAGGGAAAGGCCGGCGGACCTACTCCAGCACG CTGGCGCGCACAGGCAGGGGATACCAGGGGTGAGGTGATCTTCGGCGTTT TCTGTTGCTCTTTAAACCTGTTGGAAACCGTCCCGAAAATAACCACTACT GTGAAGGTCTTTGACGGGAATCCTGCCTGTCCGTATCCCTCAGGTGCTAG CCGCACCTGCCGTGCGTAGCCCAATTGAGCAGAAAAGCCCAAGGCATGCT GCTGTCACGTCGACCATGGCTGTCGAGCCCAGAATCACAACGTCCTATAC CACCAAGGCCGCGTCCCGCGCATGTTCGTCCGCTCTTGCTCAATCTACGA ATTCGGTGTCCGTCTATTGGCAGCGACCTGCCCCGCTGCAGGGGTTCGCC TACGAACTCACGGACATCATGAAGGATTTCGAGATGGATGGAAGGCGGGG CAGTTCTCCCTTCCGCAGTTTCGACCCTACAATGAAGCCCGTTGACAGGC ATGGGCTAGGAGAAGAGTGGGCACGGGTTACGAATGACACCGCTCATCAG TTCAAGAGTAAATGAGCGAAGCCCAGCGTCGGCGAGTTCTTTTGACTAGG GCTCAAATTGACGCCAACGGCGACTATTACTCCCTCCTCTATACAAATAT GGTATCTACTGTTTTGATACCACCGTACCCGCCACGGCTCATAGGAGCGT TCGCAGAGAAAGCGTCCTCTATTACTCGTCCCTGAGATTGATTTTTATTT AGGATTGGCGTCTATAAGGAGATTTGGCGTGGGGCGCGGTCGATCAGAGT GGTTGTGATGCCTCCGTTTATGTTTACACGAAAACCGGCTGTTTGCATCA CAGAGAGGGGAAGCCCAGATAGCGAAGGACGCCTGTCGTGGCTGACGACG TGGCTGAAACGCCATCTTGGGGTGTTTGACCCTGGCCGAAGCGTGGTTGT CCACCCTGTAGATACGCGATGACGGCAGGGGAGAAGACCAAGAGGTGGGC ATTGAGCTCACGATGCTTGCTGTCATTTTCGCCGTGGTTGTGACTGGGTT ATTGTGTGTTGGGCGTCAAGTGGTTGCGTCTACGTACGGATCGTGGCCCC CTAGACCGCTCGCCCACCGCGGTTAGGCGCTTGCTGCCAACGGTACGTAG GCGCAGGCGGTGTTGCTTCGATGGTGGTGGTCATCACCGGACTATGTTGG CGATTTGGTCGTAAATACAGCAAGTAGTTCGGATGTGGGGATGGCTTGCT TTCTTTTATCGCGCTTTTGTTGACCTGTCTGGGTCCTTTGTCTTTTTTTT TTTTTTTTACCTTTCTTGAGGTGGTTAGCTCGTTTCCACGGAAGGCGTCC GCATCGGCTGGATCAGTACGGATGGTGAAAGGAAGGTTTTGCGGAGAGAT CGAACGGTTTTTAATGTGATGGCAACAATAACAACAAAACAAAGTGCAGC CGAAATATGGACGGACCGAACGTTGAGCCACCCTGTTAGTTTTCCCATGT TTGAACGCCCATCGCTTGGTGTATGGTTTGCACCTGCTTGCATAGTATGG CGTCGGTTTGCCATGTCGTGGTTGGTGTTTGAGGTTCATGTGTTCAATTG ATTCCCTCCGCTCCGCCCGGCACCAATGAATCTAAGAGGCAGCTGTGCAA GGTGACTTTTTACAATTTTTGACAGACTGGTGTGAATTTGCGCCTAGAAC CTGTTCCCATAAAAATTGAAGTTTATCGTGATGGTACTGTATGTGGAAGA AAACCGTCCTCTCTACGATGACGAGGTGTTGGACGAATGCATGTGGGCTA CGGCATTTCCCGCTCGAACTCGAGTTCGTTGACGTCTTTTGCGGGGATTG GCAGGGAACACATCGATCGGTGGTCTTGATCTGTGGTTGATCGCAAAAAA TGTGTATCACCCACCGTACCTCCCTGTAGTTATCCTCGGCCATTTGTGCT TTTGGGTAAAAGCCGTAAGACAACACATTTATTTTATTTTATTTTTTTGG TCCTCCGGCGGACATGGGAAAAAAAGTAACGCACATAACAATACACTTCT TCCCTGGTGAGCGCACGGCACGACCACGCAGAGATGTGAGATAGTACGCG GGCTGTTGGGGGAGACGTACTTTTTGTATTGCCCTGTTACCTCATGACAC TTGATTTGCACAGTGTCGGAGTTGCTCTCGAAGCTCCCGTATCCTGGTTC ACGCGAAGTCCCCAAAATCATTTTCTTTCCCATTTGACAAGGTGTTCGGT GTGTTTGTGTGTTGTGTTCATGCATACACGCCACGTCTTTAGGATTGATA GCGATTCAAGGGACGACTTTTGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig18:688152..696525-

>mRNA_P-littoralis_Contig18.149.1 ID=mRNA_P-littoralis_Contig18.149.1|Name=mRNA_P-littoralis_Contig18.149.1|organism=Pylaiella littoralis U1_48|type=CDS|length=912bp|location=Sequence derived from alignment at P-littoralis_Contig18:688152..696525- (Pylaiella littoralis U1_48)
ATGGATAGGAGCTTGAGAGAGGACGTGGCCTTCATACGGTGGCCGATCCT
TCGCCTAGTGTGCGTGCTGCCCGCCCCCGAGAACGAGAAGGAGTTAGATA
GATCGTTCGAGGCATGGTCGGCCAAACTGAAGGAGTGGTCCGCCGGCGGG
AAAATAGCAGGGAGAGGGATTGCAACGCAAAAGCTGCGTGTGTTCTTCCT
CTGCGCGCAGGATCTGAGCCTCGCCGAGTGCGGGCCCAAAGGGCAATGGT
ACGAGGCGAAGGTGTTGTTGAAGTGGGCGAAGAAAGCGAAGCGGTCGGCG
AAGGTGGGATTGTTCCTCGCCGAGATCGTGTTCAAACTGTGCATCGGCCT
GGCACTTCCTTCTAACATGTTGGAGACCGCACTTGGGATAGAAGCCGGCG
GTGCCTTATCCACGTTGGTCACGGACTCGCTAGGCTCGGGCGTCGAGACG
ATGGCGAGCGTCGCCGGGGAGAACCTGGAAAGGGAAAGGCCGGCGGACCT
ACTCCAGCACGCTGGCGCGCACAGGCAGGGGATACCAGGGGTGCTAGCCG
CACCTGCCGTGCGTAGCCCAATTGAGCAGAAAAGCCCAAGGCATGCTGCT
GTCACGTCGACCATGGCTGTCGAGCCCAGAATCACAACGTCCTATACCAC
CAAGGCCGCGTCCCGCGCATGTTCGTCCGCTCTTGCTCAATCTACGAATT
CGGTGTCCGTCTATTGGCAGCGACCTGCCCCGCTGCAGGGGTTCGCCTAC
GAACTCACGGACATCATGAAGGATTTCGAGATGGATGGAAGGCGGGGCAG
TTCTCCCTTCCGCAGTTTCGACCCTACAATGAAGCCCGTTGACAGGCATG
GGCTAGGAGAAGAGTGGGCACGGGTTACGAATGACACCGCTCATCAGTTC
AAGAGTAAATGA
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