prot_P-littoralis_Contig18.147.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.147.1
Unique Nameprot_P-littoralis_Contig18.147.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length58
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig18.147.1 vs. uniprot
Match: A0A6H5JYY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.580e-13
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0 
Query:    1 MEAAAKEGRENVIMALVERGFSCRVNVDQAAPPQVPGDNLLEMVLRELPRCDCY 54
            ME+AAKEGR NVI ALV RGF+C+V V+QAAP  V GD+L+   LR+LPRC+ +
Sbjct:  417 MESAAKEGRSNVIAALVGRGFACQVQVEQAAPCDVEGDDLMGRYLRDLPRCEWH 470
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYY2_9PHAE2.580e-1362.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:674836..675009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.147.1mRNA_P-littoralis_Contig18.147.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 674635..675098 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.147.1 ID=prot_P-littoralis_Contig18.147.1|Name=mRNA_P-littoralis_Contig18.147.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=58bp
MEAAAKEGRENVIMALVERGFSCRVNVDQAAPPQVPGDNLLEMVLRELPR
CDCYAGL*
back to top