prot_P-littoralis_Contig18.123.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.123.3
Unique Nameprot_P-littoralis_Contig18.123.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length123
Homology
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.900e-40
Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNLHG 122
            S TQ+IV+LST+EAEY+A G+GVKEALF +AV SF+ P  S   IKVL DN+GAI+L  NP SSAR+KHIDVRFHF+REL  SG+I+ EY+PT E+ AD+LTKAL  +  + HR+ LMN+ G
Sbjct:  250 SKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIPG 371          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5KVG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG7_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.810e-39
Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNL 120
            S +Q++V LSTTEAEY+A G+GVKEALF +AV SF+ P  S   I+V  DN+GA+ L  NPLSSAR+KHIDVRFHF+REL  SG+I+ EYV T E+ AD+LTKAL     + HR  LMNL
Sbjct:   17 SKSQRVVALSTTEAEYIAAGEGVKEALFVRAVLSFVAPETSWASIQVREDNQGAMTLVQNPLSSARSKHIDVRFHFIRELFKSGRISVEYVSTDEQHADLLTKALCRVKLEYHRKALMNL 136          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.230e-38
Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNLHG 122
            S TQ+IV+LST+EAEY+A G+GVKEALF +AV SF+ P  S   IKVL DN+GAI+L  NP SSAR+KHIDVRFHF+REL  SG+I+ EY+PT E+ AD+LTKAL  +  + HR+ LMN+ G
Sbjct: 1125 SKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIPG 1246          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.280e-38
Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNLHG 122
            S TQ+IV+LST+EAEY+A G+GVKEALF +AV SF+ P  S   IKVL DN+GAI+L  NP SSAR+KHIDVRFHF+REL  SG+I+ EY+PT E+ AD+LTKAL  +  + HR+ LMN+ G
Sbjct: 1678 SKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIPG 1799          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 8.020e-38
Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNL 120
            S TQ IV+LS+TEAEY+A G+GVK ALF +AV SF+ P  S + I+VL DN+GAI L  NPLSS RTKHIDVRFHF+R L  SG I+  +VPT E+ AD+LTKAL  ++ + HR  LMNL
Sbjct:  111 SKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYHRRKLMNL 230          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5JYL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL4_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.180e-37
Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNL 120
            S TQ IV+LS+TEAEY+A G+GVKEALF +AV SF+ P  S + IKVL DN+GAI L  NPLSS RTKHIDVR+HF+R L  SG I+ ++VPT E+ AD+LTKAL   + + HR  LM L
Sbjct:   87 SKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMKL 206          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5KXX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX2_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 3.450e-37
Identity = 72/120 (60.00%), Postives = 91/120 (75.83%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTV-ERADILTKALVGSAFKAHRDFLMNL 120
            S TQ IVTLS+TEAEY+A G+GVKEALF +A  SF+ P  S + I+VL DN+GAI +  NPLSS+RTKHID+RFHF+R L  SG I+A+ VPT  + AD+LTKAL  ++ + HR  LMNL
Sbjct:  127 SKTQSIVTLSSTEAEYIAAGEGVKEALFVRAALSFVAPETSGSNIQVLEDNQGAIAVVQNPLSSSRTKHIDLRFHFIRRLFRSGDISAKLVPTTGQHADLLTKALSRASLQYHRRKLMNL 246          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5JFV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV7_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 7.130e-37
Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    5 QKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNL 120
            Q++   ST+EAEY+A G+GV+EALF + V SF+ P  S+  IKVL DN+GA+ L  NP SSAR+KHIDVRFH++REL  SGKITAEYVPT E+ AD+LTK L    F+ HR  LMNL
Sbjct:  145 QRVSAQSTSEAEYMAAGEGVREALFVRGVLSFIAPETSEAKIKVLEDNKGALALIENPFSSARSKHIDVRFHYIRELFKSGKITAEYVPTGEQHADMLTKVLGREKFEYHRKALMNL 261          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.190e-36
Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMN 119
            S TQ IV+LS+TEAEY+A G+GVKEALF +AV SF+ P  S + I+VL DN+GAI L  NPLSS RTKHIDVR+HF+R L  SG I  ++VPT E+ AD+LTKAL  ++ + HR  L+N
Sbjct:  106 SKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFGSGDIAVKFVPTKEQHADLLTKALSRASLQYHRRKLIN 224          
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Match: A0A6H5KUQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ2_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.770e-36
Identity = 70/120 (58.33%), Postives = 91/120 (75.83%), Query Frame = 0
Query:    2 SSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLVDNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVER-ADILTKALVGSAFKAHRDFLMNL 120
            S TQ IV+LS+T AEY+A G+GVKEALF +AV SF+ P    + I+VL DN+GA+ L  NPL+S RTKHIDVRFHF+R L  SG+I+ ++VPT E+ AD+LTKAL  ++ + HR  LMNL
Sbjct:   97 SKTQSIVSLSSTVAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAMALVQNPLNSGRTKHIDVRFHFIRGLFRSGEISVKFVPTTEQHADLLTKALSRASLQYHRPKLMNL 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.123.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K6_9PHAE3.900e-4062.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVG7_9PHAE3.810e-3960.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKS3_9PHAE3.230e-3862.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE3.280e-3862.30Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJM0_9PHAE8.020e-3860.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYL4_9PHAE1.180e-3760.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXX2_9PHAE3.450e-3760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFV7_9PHAE7.130e-3760.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE1.190e-3659.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUQ2_9PHAE1.770e-3658.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 42..118
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 42..118
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 2..105
e-value: 1.89958E-41
score: 132.207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:586367..586735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.123.3mRNA_P-littoralis_Contig18.123.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 586256..592067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.123.3 ID=prot_P-littoralis_Contig18.123.3|Name=mRNA_P-littoralis_Contig18.123.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp
MSSTQKIVTLSTTEAEYVALGDGVKEALFAKAVASFLVPALSQNIIKVLV
DNEGAINLASNPLSSARTKHIDVRFHFVRELVSSGKITAEYVPTVERADI
LTKALVGSAFKAHRDFLMNLHG*
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