mRNA_P-littoralis_Contig18.40.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig18.40.4
Unique NamemRNA_P-littoralis_Contig18.40.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 1408 bits (3644), Expect = 0.000e+0
Identity = 715/777 (92.02%), Postives = 736/777 (94.72%), Query Frame = 1
Query:    1 VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQPTAWSFLQTGDAHRWLRQLHGIHTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGAWAASLLPFDAVVGDLASRLLVESREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPPNAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHCKGSRSAKQCDLYGMSMSEGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAERNVHFDAGENISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREDSNSAHSA 2331
            +KLFEDRNFLVTVVFDGRPPPAK GTSQHRRERR+KSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARI G VYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLL+EVVKN RGELVGRCVRQRLLFQPTAWSFL++GDAH WLRQLHGIH PVDEGLD TPLPEPTARRRLLLFA+IVGN+FAKFKNVGPVTAARLAF D+ESG WAASLLPFDAVVG LASRLLVESREEDTPA RRE EIRLRACH MFTQPVVWNPLSGELQH SGAPT ++ITRH GT ELSPLAS VAR D CPLTGREWDPPLGTAQAKGQA GEDAGRQKKRATPETAS+RPPNA SR SR RGP DTNNYREHGFSRLP ETEDYTK TVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIR+CGVLDTNLAFRHPVPDLSSFEEKEARLM DLPATGLRIKEWSAMRRYLPEISKAVILRFMGEV K AGEGSR+WYRS+QRVLDMGNLSRFWAVPAAGGIMWIG SAGASFSADKEYR+RIKLRVEEVDE+APPT    XXXXXXX VVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQH KGSRSAKQC+LYGMSMS GTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWA R VHFDAGE+ISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVRE++NS+H A
Sbjct:   28 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRIRIKLRVEEVDESAPPTXXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGSRSAKQCELYGMSMSVGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAARKVHFDAGEDISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVREENNSSHFA 804          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 1095 bits (2831), Expect = 0.000e+0
Identity = 563/613 (91.84%), Postives = 581/613 (94.78%), Query Frame = 1
Query:    1 VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQPTAWSFLQTGDAHRWLRQLHGIHTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGAWAASLLPFDAVVGDLASRLLVESREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPPNAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAG 1839
            VKLFEDRNFLVTVVFDG+PPPAKGGTSQHRRERREKSAQQARALH AGGCP+E+NKLASAACAFDGRVTAEIATRLRARIGG VYIAPGEADPQLVVFQDIHLATG NVYVYANDSDLTVLGVRDLL+EVVKNTRGEL+GRCVRQRLLFQPTAWSFL++GDAH WLRQLHGIHTPVDEGLD TPLPEPTARRRL+LFAMIVGN+FAKFKNVGPVTAARLAF D+ SG WA SLLPFDAVVGDLASRLLVES+EEDTPAA REVEIRLRACH MFTQPVVWNPLSGELQH SGAPTS+DITRHTGTLELSPLAS VARGDVCPLTG EWDPPLGTAQAKGQA GEDA R KK+ TPE ASSRPPNA SRTSR RGP +TNNYR HGFSRLPGETEDYTKWTVPKLREFL+VFRCLDNAGTSGFNKALLAQMAGDVVRLIR+CGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRR+LPEISKAVILRFM EVNK AGEGSR+WYRSLQRVLDMGNLSRFWAV AAGGIMWIG SAGASFSADKEYRVRIKLRVEEVDENAPPT    XXXXXXX VVGNDPRSAQTLVALEVIAALCECPAG
Sbjct:  273 VKLFEDRNFLVTVVFDGQPPPAKGGTSQHRRERREKSAQQARALHAAGGCPMEVNKLASAACAFDGRVTAEIATRLRARIGGEVYIAPGEADPQLVVFQDIHLATGPNVYVYANDSDLTVLGVRDLLVEVVKNTRGELIGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHTPVDEGLDYTPLPEPTARRRLVLFAMIVGNDFAKFKNVGPVTAARLAFVDAASGVWATSLLPFDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGGEWDPPLGTAQAKGQAAGEDASRPKKKVTPEIASSRPPNASSRTSRARGPQETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRHLPEISKAVILRFMREVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVSAAGGIMWIGTSAGASFSADKEYRVRIKLRVEEVDENAPPTEXXXXXXXXXXXVVGNDPRSAQTLVALEVIAALCECPAG 885          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 1001 bits (2589), Expect = 0.000e+0
Identity = 539/661 (81.54%), Postives = 553/661 (83.66%), Query Frame = 1
Query:    1 VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQPTAWSFLQTGDAHRWLRQLHGIHTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGAWAASLLPFDAVVGDLASRLLVESREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPPNAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHCKGS 1983
            +KLFED NFLVTVVFDGRPPP K GTSQHRRERR+KSAQQARALHDAGGCPVEINKLASAACAF+GRVTAEIATR RA I G VYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLL+EVVKN                                                       T+R                 K    +  ARLAF D+ESG WAASL PFDAVVGDLASRLLVESREEDTPAARRE EIRLRACH M TQPVVW+PLSGELQH SGAPT ++ITRHTGTLELSPLAS VARGDVCPLTGREWDPPLGTAQAKGQA GEDAGRQKKRATPETAS+RPPNA SR SR RGP DTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLD AGTSGF KALLAQMAGDVVRLIR+CGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVI RF+GEVNK AGEGSR+WYRSLQRVLDMGNLSRFWAVPAAGGIMWIG SAGASFSADKEYRVRIKLRVE VDENAPPT QE XXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQH KGS
Sbjct:   28 MKLFEDHNFLVTVVFDGRPPPVKSGTSQHRRERRKKSAQQARALHDAGGCPVEINKLASAACAFNGRVTAEIATRSRALIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNAT-----------------------------------------------------TSRNS---------------KMSDQLLPARLAFVDTESGVWAASLQPFDAVVGDLASRLLVESREEDTPAARREFEIRLRACHTMVTQPVVWDPLSGELQHLSGAPTREEITRHTGTLELSPLASRVARGDVCPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVISRFLGEVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRVRIKLRVEGVDENAPPTEQEXXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHGKGS 620          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 883 bits (2282), Expect = 0.000e+0
Identity = 465/569 (81.72%), Postives = 484/569 (85.06%), Query Frame = 1
Query:    1 VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQPTAWSFLQTGDAHRWLRQLHGIHTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGAWAASLLPFDAVVGD---LASRLLVESREED---TPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPPNAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSADKEYRVRIKLR 1689
            +KLFEDRNFLVTVVFDGRPPPAK GTSQHRRERR+KSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARI G V IAPGEADPQL VFQDIHLATGANVYVYANDSD TVLGV DLL+EVVKN RGELVGRCVRQRLLFQPT WSFL++GD    LRQLHGIH PVDEG D TPLPEPTARRRLLLFA+IVG +FAKFKNVGPVTAARLAF D+ES            V G      S  L E+  +    +P  R            +   PVVWNPLSGELQH SGA T ++ITRHTGTLELSPLAS VARGD+C LTGREWDPPLGTAQ KGQA G DAGRQKK+ATPETASSRP NA SR SR RGP DTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDN GTSG NKALLAQMAGDVVRLIR+CGVLDTNLAFRHP PDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFM EVNK AG+GSR+WYRSLQRVLDMGNLSRFW V AAG IMWIG SAGASFSADKEYRVRIKLR
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVNIAPGEADPQLAVFQDIHLATGANVYVYANDSDFTVLGVLDLLVEVVKNARGELVGRCVRQRLLFQPTTWSFLRSGDVRGRLRQLHGIHQPVDEGFDYTPLPEPTARRRLLLFAIIVGKDFAKFKNVGPVTAARLAFVDTES------------VSGRHLCYHSMRLWETWPQGCWWSPGRRTR----------LLRGPVVWNPLSGELQHLSGASTREEITRHTGTLELSPLASRVARGDICLLTGREWDPPLGTAQGKGQAAGADAGRQKKKATPETASSRPSNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNTGTSGLNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPFPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMREVNKLAGKGSRLWYRSLQRVLDMGNLSRFWTVQAAGSIMWIGTSAGASFSADKEYRVRIKLR 547          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 778 bits (2010), Expect = 1.870e-275
Identity = 437/594 (73.57%), Postives = 464/594 (78.11%), Query Frame = 1
Query:    1 VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQPTAWSFLQTGDAHRWLRQLHGIHTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGAWAASLLPFDAVVGDLASRLLVESREEDTPAAR-REVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTG--REWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPPNAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGND 1773
            +KLFEDRNFLVTVVFDGRPPPAK GTSQHRRERR+KSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARI G VYIAPG+ADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRD L+EVVKN RGELVGR VRQRLLFQPTAWSFL++GDAH WLRQLHGIH PVDEGLD TPLPEPT RRRLLLFA+IVGN+FAKFKNVGPVTAARLAF D+ESG WAASLLPFDAVVGDLASRLLVESREEDTPAAR R VE   R       +P                   D    H    ++  + + V  G    L+       P  G +  +G  G     + ++RAT ETAS+RPPNA SR SR RGP DTNNYREHGFSRLPGETEDYTKWTVPKLREF+SV+RCLDNAGTSGFNKALLAQMAGDVVR+IR+CGVLDTNLAFRHPVPDLSSFEE+EARLMPDLPATGLRIK  +A                                     VLDMGNLSRFWAVPAAGGIMWIG SAGASFSADKEYRVRIKLRVEEVDENA PT Q  XXXXXXXEVVGND
Sbjct:    1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGKADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDRLVEVVKNARGELVGRSVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTGRRRLLLFAVIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGDLASRLLVESREEDTPAARPRGVEPAERRTPTFVRRP-------------------DQGGNHPPYRDVGAIPAGVPCGPGRCLSADRARMGPTAGYSTNEGAGGRRGCWQAEERATLETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDLSSFEEEEARLMPDLPATGLRIKIAAA-------------------------------------VLDMGNLSRFWAVPAAGGIMWIGTSAGASFSADKEYRVRIKLRVEEVDENAHPTEQXXXXXXXXXEVVGND 538          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 790 bits (2040), Expect = 1.890e-275
Identity = 426/791 (53.86%), Postives = 535/791 (67.64%), Query Frame = 1
Query:    1 VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQPTAWSFLQTGDAHRWLRQLHGI---HTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGA-WAASLLPFDAVVGDLASRLLVESREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPPNAG-----------------SRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSADKEYRVRIKLRVEEVDENAPPTGQEEXXXXXXXEVVGNDPRSAQTLVALEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMACRWIMQHCKGSRSAKQCDLYGMSMSEGTTVVRSVRDPKGNVGWDDDKQVHASGVPPIDRMNQFNPHPTGGMWAERNVHFDAGENISKLKRDKLMAFVNHERRSDHQEVCLDYLPPRVRED 2310
            V  FE R F VTVV DG  PPAK  TS+ RR +RE +A +AR L   GG   EINK AS AC FD RV A +AT LR +I G VYIAP EADPQ+V+FQDI+L TG  VYVYANDSDL VLGVR LL +V     G L G C+R RL+FQP  W+F    + + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GN+FA FKN+GPV AA++AF   E      A+++ F+A+VG+LA  ++ +S+EE+TPAA  E E +LR  H MF   VVW+PL   L+HFSGA +S  IT+ TGTLE S +AS +A G+V P TG+ W PPL   +            Q+ R       S+PP                    ++ SR     DTNNY +HGFSRLPG  ED+ KWTV +LREFLSVFRCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE  +MP+LP    RI  +  ++++LPE+SK+VIL+F+G+VN  +GEGSR+WYR +Q+V+DMGNL+R W VPA  G+M++G+SAGASFS  K Y VRI+LRVE +DE+A P+  EE          G  PR    LVAL V+AALCECPAGI GGCSH AM LFL RLLQM+E++LATFNP+TCTG AC WIMQ+CKG RS +QC LYG  +S GT VVR +RDP+   G+DDD      GV  IDRM  FNPHP+GG W E  +HFDAG++ S+ K DKL+AFV+  R  D++ V +DYLPP VRED
Sbjct:   67 VSRFESRGFKVTVVLDGSTPPAKKSTSEARRTKREAAASEARELQRTGGRLTEINKKASNACVFDSRVVARVATLLRPQIAGEVYIAPREADPQIVIFQDIYLETGCTVYVYANDSDLIVLGVRSLLWDVRGTDAGNLTGVCIRSRLIFQPPEWAFAIDAEGYAFLRQLHGLPRGHTP---NLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVSFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRAHNMFHNAVVWDPLKNTLRHFSGAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIA----------QELRRATRRPGSQPPXXXXXXXXXXXXXXXXXXXXNKRSRNAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMSAGASFSDTKTYEVRIQLRVEALDESAHPSAAEEEGRGVES---GQWPRPP--LVALGVVAALCECPAGISGGCSHTAMVLFLTRLLQMTEDELATFNPSTCTGRACSWIMQNCKGGRSGEQCSLYGEPLSHGTNVVRKMRDPRR--GFDDDLLAKVQGVTAIDRMQHFNPHPSGGKWDELKLHFDAGKDFSRFKMDKLLAFVDCARGPDNRAVAMDYLPPLVRED 837          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 1.440e-108
Identity = 194/401 (48.38%), Postives = 263/401 (65.59%), Query Frame = 1
Query:  481 DAHRWLRQLHGI---HTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGA-WAASLLPFDAVVGDLASRLLVESREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPP-------------NAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGI 1632
            + + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GN+FA FKN+GPV AA++AF   E      A+++PF+A+VG+LA  ++ +S+EE+TPAA  E E +LR    MF   VVW+PL   L+HFS A +S  IT+ TGTLE S +AS +A G+V P TG+ W PPL   +   +          +RAT    S  PP                ++ SR     DTNNYR+HGFSRLPG  ED+ KWTV +LREFLSVFRCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE   MP LP    RI  +  ++++LPE+SK+VIL+F+ +VN  +GEGSR+    +Q+V+DMGNL+R W VPA  G+M++G+
Sbjct:    4 EGYDFLRQLHGLPRRHTP---NLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSQNMFHNAVVWDPLKNTLRHFSCAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEF---------RRATRRAGSQMPPXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPGLPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRV---GMQKVMDMGNLNRLWGVPAKNGLMYLGM 389          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 3.580e-80
Identity = 140/292 (47.95%), Postives = 189/292 (64.73%), Query Frame = 1
Query:  817 MFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPP------------------NAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISA 1638
            MF   VVW+PL   L+HFSGA +S  IT  TGTLE S +AS +A G+V P TG+ W PPL   +            Q+ R       S+PP                   + ++ SR     DTNNY +HGFSRLPG  ED+ KWTV +LREFLSVFRCLD+AG S + K  L ++AG +V +I+ CG+L++N AFRHPVPDLSSF++KE   MP+LP    RI  +  ++++LPE+SK+VIL+F+ +VN  +GEGSR+WYR +Q+V DMGNL+R W VPA  G+M++G+S+
Sbjct:    1 MFHNAVVWDPLKNTLRHFSGAASSLAITNDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIA----------QEFRRATRRPGSQPPXXXXXXXXXXXXXXXXXSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRVWYRGMQKVTDMGNLNRLWGVPAKNGLMYLGMSS 282          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7G6L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 6.140e-77
Identity = 159/360 (44.17%), Postives = 213/360 (59.17%), Query Frame = 1
Query:  481 DAHRWLRQLHGI---HTPVDEGLDCTPLPEPTARRRLLLFAMIVGNEFAKFKNVGPVTAARLAFGDSESGA-WAASLLPFDAVVGDLASRLLVESREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDITRHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQKKRATPETASSRPP----------------NAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFM 1500
            + + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GN+FA FKN+GPV AA++AF   E      A+++PF+A+VG+LA  ++ +S+EE+TPAA  E E +LR  H MF   VVW PL   L+HFS A +S  IT+ TGTLE S +AS +A G+V P TG+ W PPL  A+            Q+ R       S+PP                   ++ SR     DTNNY +HGFSRLPG  ED+ KWTV +LREFLSV                       VV +I+ CG+L++N AFRHPVPDLSSF++KE   MP+LP    RI  +  ++++LPE+SK+VIL+F+
Sbjct:    4 EGYDFLRQLHGLPRRHTP---NLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSHNMFHNAVVWGPLKNTLRHFSCAASSLAITKDTGTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMA----------QEFRRATRRPGSQPPXXXXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV----------------------QVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFL 328          
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Match: D7G2U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U9_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 4.460e-34
Identity = 61/116 (52.59%), Postives = 89/116 (76.72%), Query Frame = 1
Query: 1309 LIRNCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASFSA 1656
            +I+ CG+L++N AFRHP+PDLSSF++KE   MP+LP    RI  +   +++LPE+SK+VIL+F  +VN  +GEGSR+WYR +Q+V+DMGNL+R W VPA  G+M++G+S   + SA
Sbjct:    1 MIKKCGLLNSNQAFRHPIPDLSSFQDKERMAMPELPGPRSRISGFEHPQQHLPEMSKSVILQFPRQVNPISGEGSRVWYRGMQKVMDMGNLNRLWRVPAKNGLMYLGMSFVGALSA 116          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.40.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G0K2_ECTSI0.000e+092.02Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A6H5KVY6_9PHAE0.000e+091.84Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZG7_ECTSI0.000e+081.54Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus ... [more]
D7FZU5_ECTSI0.000e+081.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4G5_ECTSI1.870e-27573.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFX7_9PHAE1.890e-27553.86Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FQM4_ECTSI1.440e-10848.38Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G3Y3_ECTSI3.580e-8047.95Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G6L7_ECTSI6.140e-7744.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2U9_ECTSI4.460e-3452.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:200291..204399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G0K2
PFAMsXPG_I,XPG_N
Model size2334
Max annot lvl2759|Eukaryota
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons4
Evalue0.0
EggNOG OGsCOG0258@1|root,KOG2518@2759|Eukaryota
Description5'-3' exodeoxyribonuclease activity
Cds size2334
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789861.7739515-CDS-P-littoralis_Contig18:200290..2009901680789861.7739515-CDS-P-littoralis_Contig18:200290..200990Pylaiella littoralis U1_48CDSP-littoralis_Contig18 200291..200990 -
1680789861.7860224-CDS-P-littoralis_Contig18:201527..2019341680789861.7860224-CDS-P-littoralis_Contig18:201527..201934Pylaiella littoralis U1_48CDSP-littoralis_Contig18 201528..201934 -
1680789861.8029695-CDS-P-littoralis_Contig18:202796..2031131680789861.8029695-CDS-P-littoralis_Contig18:202796..203113Pylaiella littoralis U1_48CDSP-littoralis_Contig18 202797..203113 -
1680789861.815827-CDS-P-littoralis_Contig18:203489..2043991680789861.815827-CDS-P-littoralis_Contig18:203489..204399Pylaiella littoralis U1_48CDSP-littoralis_Contig18 203490..204399 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.40.4prot_P-littoralis_Contig18.40.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig18 200291..204399 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig18.40.4

>prot_P-littoralis_Contig18.40.4 ID=prot_P-littoralis_Contig18.40.4|Name=mRNA_P-littoralis_Contig18.40.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=778bp
VKLFEDRNFLVTVVFDGRPPPAKGGTSQHRRERREKSAQQARALHDAGGC
PVEINKLASAACAFDGRVTAEIATRLRARIGGVVYIAPGEADPQLVVFQD
IHLATGANVYVYANDSDLTVLGVRDLLLEVVKNTRGELVGRCVRQRLLFQ
PTAWSFLQTGDAHRWLRQLHGIHTPVDEGLDCTPLPEPTARRRLLLFAMI
VGNEFAKFKNVGPVTAARLAFGDSESGAWAASLLPFDAVVGDLASRLLVE
SREEDTPAARREVEIRLRACHAMFTQPVVWNPLSGELQHFSGAPTSDDIT
RHTGTLELSPLASAVARGDVCPLTGREWDPPLGTAQAKGQAGGEDAGRQK
KRATPETASSRPPNAGSRTSRPRGPPDTNNYREHGFSRLPGETEDYTKWT
VPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRNCGVLDTNLAF
RHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFM
GEVNKFAGEGSRMWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGISAGASF
SADKEYRVRIKLRVEEVDENAPPTGQEEKEREEEEEVVGNDPRSAQTLVA
LEVIAALCECPAGIKGGCSHAAMALFLGRLLQMSEEQLATFNPTTCTGMA
CRWIMQHCKGSRSAKQCDLYGMSMSEGTTVVRSVRDPKGNVGWDDDKQVH
ASGVPPIDRMNQFNPHPTGGMWAERNVHFDAGENISKLKRDKLMAFVNHE
RRSDHQEVCLDYLPPRVREDSNSAHSA*
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mRNA from alignment at P-littoralis_Contig18:200291..204399-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig18.40.4 ID=mRNA_P-littoralis_Contig18.40.4|Name=mRNA_P-littoralis_Contig18.40.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=4109bp|location=Sequence derived from alignment at P-littoralis_Contig18:200291..204399- (Pylaiella littoralis U1_48)
GTGAAGCTCTTTGAAGACCGCAATTTCCTAGTGACGGTGGTGTTCGACGG TCGGCCGCCTCCGGCCAAGGGTGGGACATCTCAACACCGACGAGAGAGGA GGGAGAAGAGTGCACAACAGGCGCGCGCTCTACACGACGCCGGTGGGTGT CCCGTGGAAATCAACAAGTTGGCCAGCGCTGCATGTGCTTTCGACGGTCG AGTCACCGCTGAGATCGCAACGCGCTTGAGAGCCCGTATCGGGGGGGTGG TTTATATCGCCCCAGGCGAAGCGGATCCACAGCTTGTAGTTTTCCAGGAC ATCCATCTCGCAACAGGGGCGAACGTGTACGTGTATGCCAATGACTCCGA CTTGACAGTTCTTGGGGTGCGGGATCTGTTGTTGGAAGTGGTCAAGAACA CGAGAGGAGAGCTTGTCGGGAGATGCGTCCGGCAGAGGCTGCTCTTCCAA CCCACGGCATGGTCCTTCCTCCAGACTGGGGATGCTCATAGGTGGCTGCG CCAGCTGCACGGAATACACACGCCAGTTGACGAGGGCCTAGACTGCACGC CTCTACCGGAACCGACTGCCCGCCGCCGCCTCCTCTTGTTCGCCATGATC GTAGGCAACGAGTTCGCGAAATTCAAAAATGTTGGACCTGTTACTGCGGC AAGACTAGCTTTCGGTGACTCCGAGAGCGGTGCCTGGGCGGCATCTTTGC TGCCATTCGATGCGGTAGTGGGAGACCTGGCCTCAAGGCTGCTGGTGGAG TCCAGGGAGGAGGACACGCCTGCTGCGCGGCGTGAGGTTGAGATCCGACT GCGCGCCTGCCACGCCATGTTTACACAGCCCGTGGTGTGGAACCCGCTGA GCGGCGAACTCCAACATTTTTCCGGCGCGCCGACCAGCGATGACATCACC CGCCATACAGGTCAGTGTTAGTGGCGTGTGTAGGAATGCTCCTCATACAT AAGACCAGCTTTTGAATGGTGTTTCCCGACGTCACCCTACTTGTAGTCGG GCACCAGCAGTGAGACCTTACATCTGCGTGCAGCAAGGAGGGCTGCTGTA CCTTCAAACATTTTGCAGCCTTTCTACAAGTATTCAACAATTTAATTGTA GATTTGTTGTAAAACTGAATTCAACCTCAACCGGCATTTGCTCGTCCCGT GATTACACCGCTCCCGCTGTATGCATATTGTCTAAACCTGCTGTACTGAT GTATATGCAGATACATTTAGTGACGGCGTTGCATATTCTATCGCCTGAAC TGACTTCATTGTCATGCTCGCATCCCGCACGTACAGGGACATTGGAGCTA TCCCCGCTGGCGTCCGCCGTGGCCCGGGGAGATGTCTGTCCGCTGACCGG GCGCGAATGGGACCCACCGCTGGGTACAGCACAGGCGAAGGGGCAGGCGG GAGGCGAGGATGCTGGCAGGCAGAAGAAAAGGGCAACACCCGAGACGGCT AGCAGCCGCCCCCCGAATGCTGGTAGCAGGACGTCTCGCCCTCGAGGTCC TCCAGACACAAACAACTACCGCGAGCACGGCTTCAGCAGACTCCCTGGGG AGACTGAAGATTACACCAAGTGGACCGTGCCTAAGCTTCGCGAGTTTCTA AGTGTGAGTAAAAGACGATTCATTTTGTAGAGAGCTGCTGTCAGTAGGTA ACCATTAGATTGGGATGAGGGTACTTACAGTGCTAGCTGTGACAGAATAT TTGGTCCATAGACCATTGCTACATCGAAGTTTATTTTGGGCACAAGATGC GTCCCGTGTTGTAAACTTGGCGTTTCATAATATTCCAGCTTCCGAGTGCG CCCTAACCCTCAAGCATGAGGTAGAGCGATGTACGCACACACGCGTACCT ATGTCGGTCCGCATACGAAAGAGACCACACACCACGTTCCGCTTCTAACC TAGCGCACTATGCATGCGGCTGCTATGCATGCGGCTGCTGTTAATAAGGT TCGGGGCGGATATCCCGATTGGTTCACGTGGATTGGTTTACGTAGTACTG TGTGTTAGAATACCCCACACATCGTGCGAGTACGGACTGTAGTGAAGTTC TCGCGTACGGTGGGCCACCCTCAAACCAGATTAAGTATACCGTTGGCGCC GGGTATGTGCAATTCATCCCCCCTCGCAGTCTGTTTACGGTAATTGTCAC ATTGATCACAAGTCAGATATTGATGCGCGTCAAGCTCTCGGTAACAGCAG TAGGTCGGACACGGGATTATTGTGCGTAGGGTGACAACAAACCTAGAGAT TTCGGTGCAGTTCGCGCTCTGTTCGAGGCAGCGGGATGTTACGAGATACA CGCGGCAACTGCACGTAAAGATAGAAAATTGTAACCGAAGATAAACGTTG TTCTTCGCCTAAGATAATCGGGTGGGTTTTTGTGTGCGTCATCAGCTAAG CATGAACGTGTACGCGCCCCACATGCTTAGAATGCTCCTCTTGTCATGTG CATTTCTGTCGTCAGGTTTTCAGGTGTCTCGACAACGCCGGGACGAGCGG GTTCAACAAAGCACTCCTTGCTCAGATGGCCGGGGATGTCGTCAGGCTGA TTAGGAACTGCGGTGTGTTGGACACCAACTTGGCGTTTCGCCATCCCGTT CCGGACCTCAGCTCTTTTGAGGAAAAGGAGGCCAGGCTAATGCCGGATCT TCCTGCGACAGGGCTGCGCATAAAGGAGTGGTCCGCTATGCGGCGGTATC TCCCCGAGATATCGAAAGCCGTCATCTTACGGTTCATGGGAGAAGTGAAC AAATTTGCCGGCGAGGGCTCGCGGATGTGGTATAGATCGCTGCAGCGGGT GTTGGACATGGGGAACCTCAGCAGGTTCTGGGCCGTTCCGGCAGCAGGGG GCATAATGTGGATTGGGATTAGGTGAGGCACACGATATGCACCCCGCCTG GGAGGAGGATAGGCATAGACTGCTTCGCGTTGCCGTCATAATGTTCCCGG TTTGTGTTCCGACGTTGTTGTGTTTGATTTTCGGATTACTTAGACGGAGT ATGCTTGGTCTAGTCCCGACGTACGATTCGACGGTGACAGCGCAGCATAT TGCCACCCGGGTCTATGTGCACCATGTGCACACGTACTTTCCGTTGCATT TGTACTTTTCTATCTTCACCATGTTTACAACCGTGTAGACGTTCCCGTCG GTACGACGCTGATGCCAGCATCGTACACAAAACAAGTTACCCGCTACGAA CCTCGACGGATAGACGCGTTCCGCCAGGTGTTCTTGAATCGTTTCCCCGC ACGGCATGACGGTGCGGTACGCTGCCTTTCGTTGACTTGGTTTTCAATCC CTTCCTGCTCCGTCAGCAACGGTGTAGTTGAGAAATGAATCTAGTAAATG AAACTTCACCTAACAACCTTCCCATCCCGATGGAATAATCTCCAACTGAC AACGCACAGCGCGGGCGCCTCCTTCTCGGCCGACAAGGAGTACCGCGTCC GCATCAAACTACGAGTGGAAGAAGTGGATGAGAACGCACCCCCGACGGGG CAAGAGGAGAAGGAGAGGGAGGAAGAGGAGGAGGTCGTCGGCAACGACCC GCGGTCGGCGCAAACCCTGGTAGCCCTGGAGGTCATCGCGGCTCTCTGCG AATGTCCTGCAGGAATTAAGGGGGGGTGCTCCCACGCCGCCATGGCGCTG TTTTTAGGTAGACTGCTCCAGATGTCTGAAGAACAGTTAGCCACGTTCAA TCCTACCACGTGTACGGGAATGGCATGCCGCTGGATAATGCAGCATTGTA AGGGTTCTCGATCGGCAAAACAGTGCGACCTATACGGCATGAGTATGTCG GAAGGAACCACGGTAGTCAGGAGTGTTAGGGACCCGAAAGGGAATGTAGG ATGGGACGACGACAAACAAGTCCACGCGAGTGGGGTTCCACCCATAGATC GAATGAACCAATTCAACCCGCATCCTACCGGGGGGATGTGGGCCGAACGC AACGTGCACTTCGATGCTGGCGAGAACATCAGCAAACTCAAGAGGGACAA ATTAATGGCGTTTGTGAATCACGAGAGGCGATCGGACCACCAAGAGGTGT GCCTGGATTATCTACCGCCAAGAGTACGCGAAGATAGCAATTCTGCACAC TCTGCGTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig18:200291..204399-

>mRNA_P-littoralis_Contig18.40.4 ID=mRNA_P-littoralis_Contig18.40.4|Name=mRNA_P-littoralis_Contig18.40.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2334bp|location=Sequence derived from alignment at P-littoralis_Contig18:200291..204399- (Pylaiella littoralis U1_48)
GTGAAGCTCTTTGAAGACCGCAATTTCCTAGTGACGGTGGTGTTCGACGG
TCGGCCGCCTCCGGCCAAGGGTGGGACATCTCAACACCGACGAGAGAGGA
GGGAGAAGAGTGCACAACAGGCGCGCGCTCTACACGACGCCGGTGGGTGT
CCCGTGGAAATCAACAAGTTGGCCAGCGCTGCATGTGCTTTCGACGGTCG
AGTCACCGCTGAGATCGCAACGCGCTTGAGAGCCCGTATCGGGGGGGTGG
TTTATATCGCCCCAGGCGAAGCGGATCCACAGCTTGTAGTTTTCCAGGAC
ATCCATCTCGCAACAGGGGCGAACGTGTACGTGTATGCCAATGACTCCGA
CTTGACAGTTCTTGGGGTGCGGGATCTGTTGTTGGAAGTGGTCAAGAACA
CGAGAGGAGAGCTTGTCGGGAGATGCGTCCGGCAGAGGCTGCTCTTCCAA
CCCACGGCATGGTCCTTCCTCCAGACTGGGGATGCTCATAGGTGGCTGCG
CCAGCTGCACGGAATACACACGCCAGTTGACGAGGGCCTAGACTGCACGC
CTCTACCGGAACCGACTGCCCGCCGCCGCCTCCTCTTGTTCGCCATGATC
GTAGGCAACGAGTTCGCGAAATTCAAAAATGTTGGACCTGTTACTGCGGC
AAGACTAGCTTTCGGTGACTCCGAGAGCGGTGCCTGGGCGGCATCTTTGC
TGCCATTCGATGCGGTAGTGGGAGACCTGGCCTCAAGGCTGCTGGTGGAG
TCCAGGGAGGAGGACACGCCTGCTGCGCGGCGTGAGGTTGAGATCCGACT
GCGCGCCTGCCACGCCATGTTTACACAGCCCGTGGTGTGGAACCCGCTGA
GCGGCGAACTCCAACATTTTTCCGGCGCGCCGACCAGCGATGACATCACC
CGCCATACAGGGACATTGGAGCTATCCCCGCTGGCGTCCGCCGTGGCCCG
GGGAGATGTCTGTCCGCTGACCGGGCGCGAATGGGACCCACCGCTGGGTA
CAGCACAGGCGAAGGGGCAGGCGGGAGGCGAGGATGCTGGCAGGCAGAAG
AAAAGGGCAACACCCGAGACGGCTAGCAGCCGCCCCCCGAATGCTGGTAG
CAGGACGTCTCGCCCTCGAGGTCCTCCAGACACAAACAACTACCGCGAGC
ACGGCTTCAGCAGACTCCCTGGGGAGACTGAAGATTACACCAAGTGGACC
GTGCCTAAGCTTCGCGAGTTTCTAAGTGTTTTCAGGTGTCTCGACAACGC
CGGGACGAGCGGGTTCAACAAAGCACTCCTTGCTCAGATGGCCGGGGATG
TCGTCAGGCTGATTAGGAACTGCGGTGTGTTGGACACCAACTTGGCGTTT
CGCCATCCCGTTCCGGACCTCAGCTCTTTTGAGGAAAAGGAGGCCAGGCT
AATGCCGGATCTTCCTGCGACAGGGCTGCGCATAAAGGAGTGGTCCGCTA
TGCGGCGGTATCTCCCCGAGATATCGAAAGCCGTCATCTTACGGTTCATG
GGAGAAGTGAACAAATTTGCCGGCGAGGGCTCGCGGATGTGGTATAGATC
GCTGCAGCGGGTGTTGGACATGGGGAACCTCAGCAGGTTCTGGGCCGTTC
CGGCAGCAGGGGGCATAATGTGGATTGGGATTAGCGCGGGCGCCTCCTTC
TCGGCCGACAAGGAGTACCGCGTCCGCATCAAACTACGAGTGGAAGAAGT
GGATGAGAACGCACCCCCGACGGGGCAAGAGGAGAAGGAGAGGGAGGAAG
AGGAGGAGGTCGTCGGCAACGACCCGCGGTCGGCGCAAACCCTGGTAGCC
CTGGAGGTCATCGCGGCTCTCTGCGAATGTCCTGCAGGAATTAAGGGGGG
GTGCTCCCACGCCGCCATGGCGCTGTTTTTAGGTAGACTGCTCCAGATGT
CTGAAGAACAGTTAGCCACGTTCAATCCTACCACGTGTACGGGAATGGCA
TGCCGCTGGATAATGCAGCATTGTAAGGGTTCTCGATCGGCAAAACAGTG
CGACCTATACGGCATGAGTATGTCGGAAGGAACCACGGTAGTCAGGAGTG
TTAGGGACCCGAAAGGGAATGTAGGATGGGACGACGACAAACAAGTCCAC
GCGAGTGGGGTTCCACCCATAGATCGAATGAACCAATTCAACCCGCATCC
TACCGGGGGGATGTGGGCCGAACGCAACGTGCACTTCGATGCTGGCGAGA
ACATCAGCAAACTCAAGAGGGACAAATTAATGGCGTTTGTGAATCACGAG
AGGCGATCGGACCACCAAGAGGTGTGCCTGGATTATCTACCGCCAAGAGT
ACGCGAAGATAGCAATTCTGCACACTCTGCGTAG
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