mRNA_P-littoralis_Contig18.19.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: D8LRI8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI8_ECTSI) HSP 1 Score: 412 bits (1059), Expect = 4.520e-121 Identity = 280/598 (46.82%), Postives = 337/598 (56.35%), Query Frame = 3
Query: 534 ESTAWELSSSSMERSPLSPS--RSTSRLRGEKRXXXXXXXXXXXXXXXXXXXXXXPPRRVAAFSSPPTRPESPGSYVARMQRVLAHVEQTTGAGSASTGXXXXXXXXXXXXXXXXX--------------------VAPIEGTRVVQCWEERECGEAEQ--------------QXXXXXHQPCD----------AINRAR-------------EVNEALAF-SEEPEIQRDIEVLIAAVSAMVGMLVPEQHQWLLWAACCAVTVWFPMRRHVG----WPPSLRASWCSSPPLPPPRPSPPSLTGDSNLDNNQPSPRPAYPDQLPPPPPYTDLGGDG-DVDAAGL----------------GMDASPSAGGGAPKKNAESAAVGEVSG-------------ERYRQVLEGLSESETDFVESAGEEEKMRLLHQCLEYANYDTVGAIKVCSTFCKFRQSEGWGLVLSAEELEGPLRSRVHTLTAGRDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
+ST WELSSSS E + LSP+ RSTSR R ++ PPR ++ S+ PESPGSYVARM R+LA V QTT +++T VAP+E C ++ E E +Q + HQ + A ++ R E + L + E+PE + D+E++IAAVS MVGM+VPEQ+QW+LW CCAVTVWFP+RRH W S ++W PSL + +D D L PPPPY D+ DG DV AG+ G +P G + K VGE SG ERY+Q+L GLS++E +FVESAG+EEK RLLHQCLEYANYD GAIKVCSTFCKFR EGW LVLSA ELE PLRSRVHTLT RDRTGRG++TF+PGKLD+ KAPPA YHKMLCYVLQEV+KDEELQTKGLVLLVDAR VGF +LR FT+ADY+RGLRMLGGAFPAK+KAIRILH+NR IG+AL +AMPLLSAKMR R
Sbjct: 222 DSTLWELSSSSEESNALSPTWPRSTSRSRVRRKDGGRENGHGHANS---------PPRAIS--SAQQVLPESPGSYVARMSRILAQVRQTTSPSASATNSQAPDNGRKAFGRPLGGSSSGSNEIAAGGENTVGGETVAPVE-----DCLKDSETSEHQQPGISAVDITETSPSEGLGIGHQRLEGAVGMNQKPAAPDQKRWQGGRVLEGAELGEEHHGLVYHKEQPESRGDVELMIAAVSVMVGMIVPEQYQWILWIGCCAVTVWFPLRRHXXXXXXWG-SDASAWQQ-----------PSL--EVLIDAG---------DGLDPPPPYYDIHVDGVDVGGAGVLLKAGEPPTPSHEKLDGRAGTPMFRGESEKSIKAGEGVGESSGVLGGGGKHEEELEERYQQLLAGLSKTELEFVESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFCKFRLQEGWDLVLSAPELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVIGMALKIAMPLLSAKMRAR 780
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: A0A6H5JJW0_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW0_9PHAE) HSP 1 Score: 408 bits (1049), Expect = 2.800e-119 Identity = 276/595 (46.39%), Postives = 331/595 (55.63%), Query Frame = 3
Query: 546 WELSSSSMERSPLSPSR--STSRLRGEKRXXXXXXXXXXXXXXXXXXXXXXPPRRVAAFSSPPTRPESPGSYVARMQRVLAHVEQTTGAGSASTGXXXXXXXXXXXXXXXXX--------------------VAPIEGTRVVQCWEERECGEAEQQXXXXXHQ----PCDAIN---------------------------------RAREVNEALAFSEE-PEIQRDIEVLIAAVSAMVGMLVPEQHQWLLWAACCAVTVWFPMRRHVGWPPSLRASWCSSPPLPPPRPSPPSLTGDSNLDNNQPSPRPAYPDQLPPPPPYTDLGGDGDVDAAGLG-MDASPSAGG-------------------GAPKKNAESA-AVGEVSG-------------ERYRQVLEGLSESETDFVESAGEEEKMRLLHQCLEYANYDTVGAIKVCSTFCKFRQSEGWGLVLSAEELEGPLRSRVHTLTAGRDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDRQ 2048
WELSSSS E + LSP+R STSR R +R PPR ++ S+ PESPGSYVARM R+LAHV QTT +++T VAP+E C E+ E E +Q + P + + + E + L + E+ PE + D+EV+IAAVSAMVGM VP+Q+QW+LW CCA+TVWFP+RRH W LR +S P R + +D D L PPPPY D+ D VD +G P+AGG G +K+ E+ VGE SG ERY+Q+L GLS+ E +FVESAG+EEK RLL QCLEYANYD GA+KVCSTFCKFR EGW LVLSA ELE PLRSRVHTLT RDRTGRG++TF+PGKLD+ KAPPA YHKMLCYVLQEV+KD+ELQTKGLVLLVDAR VGF +LR FT+ DY+RGLRMLGGAFPAK+KAIRILH+NR I ALS+AMPLLSAKMR RQ
Sbjct: 257 WELSSSSEENNALSPTRPRSTSRSRVRRRDGGRENGHGHDKS---------PPRAIS--SAQQVLPESPGSYVARMSRILAHVRQTTSPSASATNSPAPDSGRKVFGRPLGGSSSGSNEIAVGGETTVGGETVAPVE-----DCLEDSEMVEQQQPGISAVDRTETSPSEGLGIEHRRLGGAVGINQKPTAPDQKRWQGGRVLEGAKLGEEHRGLVYHEQQPENRGDLEVMIAAVSAMVGMTVPKQYQWILWIGCCAITVWFPLRRHFRW--RLRRGPDASAWQQPSR--------EVLIDAG---------DGLDPPPPYDDIDIDVHVDGVDVGGTGVLPTAGGPPAPSHENIDGRTGTPMFRGDSEKSMEAGEGVGESSGVLGGGEKPEEELEERYQQLLAGLSKKELEFVESAGDEEKTRLLQQCLEYANYDMAGAVKVCSTFCKFRLQEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDKELQTKGLVLLVDARGVGFGLLRRFTLVDYKRGLRMLGGAFPAKVKAIRILHLNRVIRFALSIAMPLLSAKMRARQ 816
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: A0A0G4E9Z0_VITBC (CRAL-TRIO domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4E9Z0_VITBC) HSP 1 Score: 83.6 bits (205), Expect = 1.610e-13 Identity = 50/178 (28.09%), Postives = 86/178 (48.31%), Query Frame = 3
Query: 1539 LHQCLEYANYDTVGAIKVCSTFCKFRQSEGWGLVLSA-EELEGPLRSRVHTLTAGRDRTGRGMITFTPGKLDV--------KKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
L +CL ++ A V F +FR S GW + E+++ L S +H + RD GR M+ + LD ++ KM C++++ + D G+ L+ D + +LRHFT+AD +RG+ M +FP K++ + +L + I + + LL+ K+RDR
Sbjct: 51 LRKCLMCRDWHQQEAATVARNFSRFRDSAGWPYRIECTEDVKAALLSGLHWILPTRDIDGRPMLVYNGKVLDSINARITPQQRISIESLQKMGCFLMELLTDDPACHQHGVALVFDVGGITLGLLRHFTLADIKRGVMMWKESFPCKLRRVYVLRASPVISSIVHFVLGLLAKKIRDR 228
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: A0A7M7JFQ6_VARDE (CRAL-TRIO domain-containing protein n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7JFQ6_VARDE) HSP 1 Score: 76.6 bits (187), Expect = 5.230e-11 Identity = 47/167 (28.14%), Postives = 77/167 (46.11%), Query Frame = 3
Query: 1551 LEYANYDTVGAIKVCSTFCKFRQSEG--WGLVLSAEELEGPLRSRVHTLTAGRDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
L YD A KV + K R + +G + + EG + + T+ GRDR G + F G D K P D K+ L++ ++D Q G+ ++D + G LRH A ++ ++++ FPA+ KAI I+H GI + L+ K++ R
Sbjct: 53 LRCRKYDADRAFKVLKNYYKIRSNHPHIFGAFHPSAQ-EGTINLNLQTILRGRDRNGCAVFIFKGGCWDPKTTKPEDIFKVNVMFLEQSIQDPITQVNGISAIMDMKHFGLLQLRHSPPAHLQKVVQLIQDCFPARFKAIHIVHEPAVFGILFGIVKRFLNTKLQKR 218
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: UPI0002658DAA (alpha-tocopherol transfer protein-like n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658DAA) HSP 1 Score: 70.5 bits (171), Expect = 4.580e-9 Identity = 44/167 (26.35%), Postives = 75/167 (44.91%), Query Frame = 3
Query: 1551 LEYANYDTVGAIKVCSTFCKFRQSEG--WGLVLSAEELEGPLRSRVHTLTAGRDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
L YD+ A KV + + R S +G + + + + + T+ GRDR G + F G D K D K L++ ++D Q G+ ++D + G LRH A ++ ++++ FPA+ KAI I+H + S+ LS K+ +R
Sbjct: 55 LRCRKYDSERAYKVLKNYYRVRASHPNIYGEFYPSAQ-KNTIDRNLQTILRGRDRQGCAVFIFKGGLWDPKSTKSEDIFKSNVLFLEQSIQDPVTQVNGICAIMDMKHFGLLQLRHSPPAHLQKVVQLIQDCFPARFKAIHIIHEPTVFSLLFSIVKRFLSTKLHER 220
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: UPI001E1DA7B2 (alpha-tocopherol transfer protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA7B2) HSP 1 Score: 65.5 bits (158), Expect = 2.320e-7 Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 3
Query: 1683 HTLTAG-------RDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILH 1976
H L AG RD+ GR ++ F PGK D K P D K L + ++DEE Q KG+V++ D +GF + H + +R + +L +FP + KA+ +++
Sbjct: 101 HVLEAGVTGELPNRDKLGRRVMVFRPGKWDPSKFPITDMFKTNFMTLYKFIEDEETQIKGVVVIFDMNGMGFGQITHLSPFFAKRIVALLQESFPMQFKAVHLVN 205
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: UPI001E1D2ABC (alpha-tocopherol transfer protein-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2ABC) HSP 1 Score: 64.7 bits (156), Expect = 4.800e-7 Identity = 39/128 (30.47%), Postives = 63/128 (49.22%), Query Frame = 3
Query: 1683 HTLTAG-------RDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
H L AG RDR GR ++ F PGK D K D + L +++++EE Q G++LL D + +G++ R F RR + +L +FP + K I ++ + +V P + K+ DR
Sbjct: 105 HVLDAGVTGVLPHRDRQGRRVMIFRPGKWDPTKYAIDDIFRANFISLTKLVEEEEAQINGIILLADLKGMGWKQTRRFKPLLARRLIGLLQDSFPMRFKGIHYVNEPVVFDMVFAVIRPFMKQKILDR 232
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: A0A0G4H1Q5_9ALVE (CRAL-TRIO domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H1Q5_9ALVE) HSP 1 Score: 65.1 bits (157), Expect = 9.090e-7 Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 3
Query: 1563 NYDTVGAIKVCSTFCKFRQSEGWGLVLSAEELEGP---LRSRVHTLTAGRDRTGRGMITFTPGKLDV--KKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVG-FRMLRHFTMADYRRGLRMLGGAFP-AKIKAIRI 1970
++D A V F FRQS+ WG+ +SA++ EG L VH L D+ GR ++ + L+ ++ P KM ++++ V D ++ KG+ LL D RD R+L F + D +RG M AFP +K++++ +
Sbjct: 74 DWDVSQARTVLRNFVLFRQSQQWGMRISAQD-EGVATVLTKDVHWLLPSHDKKGRRLLVYNVRALETAAREHPVEVLQKMGMFLMERVTDDPQVCAKGMGLLFDCRDARPLRLLSLFGLNDMKRGTLMWKEAFPCSKLRSLSL 215
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: UPI001E1DA0C0 (alpha-tocopherol transfer protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA0C0) HSP 1 Score: 63.5 bits (153), Expect = 1.060e-6 Identity = 33/115 (28.70%), Postives = 57/115 (49.57%), Query Frame = 3
Query: 1701 RDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
RD+ GR ++ F PG+ D K P K L ++++DEE Q G+++L D + VGF T +R + +L FP ++K + ++ I +VA + K+ +R
Sbjct: 116 RDKFGRRVLVFRPGRWDPSKYPVPHVFKTNFMTLSKLIEDEETQVSGIIMLADLKGVGFGHATQMTPFFAKRIVSLLQDTFPMRLKGVHYVNEPTVFDIVFAVARQFMRKKLLER 230
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Match: A0A8C6K5R2_NOTFU (CRAL-TRIO domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6K5R2_NOTFU) HSP 1 Score: 62.4 bits (150), Expect = 1.480e-6 Identity = 45/181 (24.86%), Postives = 88/181 (48.62%), Query Frame = 3
Query: 1518 EEEKMRLLHQCLEYANYDTVGAIKVCST----FCKFRQSEGWGLV-LSAEELEGPLRSRVHTLTAGRDRTGRGMITFTPGKLDVKKAPPADYHKMLCYVLQEVLKDEELQTKGLVLLVDARDVGFRMLRHFTMADYRRGLRMLGGAFPAKIKAIRILHINRAIGIALSVAMPLLSAKMRDR 2045
EEE+ R H+ L +DT+G +VCS + +FR+ L+ E + + + + RDR G ++ F D+++ + + C +L+++L++EE Q G VL+ + + + A+ ++ + ML +FPA+ KA+ ++H +V P + AK+ +R
Sbjct: 34 EEEEQRPQHRTL----WDTMGK-RVCSVDPLGYVRFRKEYPELFENLTPEAVRSTIEAGYPVVLPSRDRYGHVVLLFNIDNWDLEEITFDEVLRAYCVILEKLLENEETQINGFVLIENFKGFTMQHASGIKTAELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKAKLLER 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.19.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig18.19.4 >prot_P-littoralis_Contig18.19.4 ID=prot_P-littoralis_Contig18.19.4|Name=mRNA_P-littoralis_Contig18.19.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=565bp MERSPLSPSRSTSRLRGEKREHEHEHEHERERERGNATSPSPPPRRVAAFback to top mRNA from alignment at P-littoralis_Contig18:126263..136273- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig18.19.4 ID=mRNA_P-littoralis_Contig18.19.4|Name=mRNA_P-littoralis_Contig18.19.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=10011bp|location=Sequence derived from alignment at P-littoralis_Contig18:126263..136273- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig18:126263..136273- >mRNA_P-littoralis_Contig18.19.4 ID=mRNA_P-littoralis_Contig18.19.4|Name=mRNA_P-littoralis_Contig18.19.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1695bp|location=Sequence derived from alignment at P-littoralis_Contig18:126263..136273- (Pylaiella littoralis U1_48)back to top |