prot_P-littoralis_Contig179.77.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig179.77.1
Unique Nameprot_P-littoralis_Contig179.77.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length506
Homology
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: A0A6H5L7H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H8_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 1.810e-137
Identity = 312/519 (60.12%), Postives = 350/519 (67.44%), Query Frame = 0
Query:    1 MSNLSYHQPKMELEPNKLLSRTIYAHQGYVSSVAFFGPQCEQLITGSYDETAKLWDLKTGLHIQKFQGHTDGVTFVLPGPDGCVLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGHLCGETELDSEVAAVTSPPPLVPRHQRNRLSASRSGGRGSVGSGGGRAKRKGDMVKQLFTSSSDGGDAFSSPRPPPT-PPVVRVLACGGTHIPAPPRPMLRSVDVRTKPKA----DAIVQDDDLV-RPSRSNLCTR---RSEYEDNSQ--------------------RAAAKEAGVMTCVAISAAGARGRGILVTGSYDRRVRVLHNVLLSDRDKDPLSASEDTDTAPPLASXXXXXXXXXXXXXXXXXXXXVTMRLLGRHDDGVRAVAISADGRWAVSGDREGGVKVWEVLQEAAPATDR-PLCEP---EAEFEAHKGYVFALCMSPNARTLVSGGSDKAVRVWDLSLIVYARRMALNRLRALWTTGRLRRGRQTR 486
            MSNLSYHQPK+EL+P +LL+RTIYAH  YVSSVAFFG QC++L+TGSYDETAKLWDLKTGL +QKFQGHTDG+TFV+PGPDG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ GHL GETELDSE+ AV                                             + SDG  + SS  P P  P VVR+LACGGT +PAP +PMLR VDVRT   A     A  ++ D+V RP+RS+LC     RSE    +                      AA KEAG+MTCVAISAAGARGRGILVTGSYD+ VRVLHNVL  DR+  P S+       PP                       VTMR+LGRH++GVRAVAISADGRWAV+GDR+G VKVWEV +EA P  DR PL      EAEFEAHKGYV++LCMSP+ART+VSGGSDKA RVWDLSLIVYARRM+LNRLRALWT  RLRR R  R
Sbjct:   51 MSNLSYHQPKVELKPTRLLARTIYAHHSYVSSVAFFGSQCDRLLTGSYDETAKLWDLKTGLALQKFQGHTDGITFVMPGPDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGHLHGETELDSEITAV---------------------------------------------AGSDGPPSPSSSSPAPVVPSVVRILACGGTFLPAPAKPMLRRVDVRTAAAAARADQAGGEEADVVSRPARSDLCAAAAGRSERNGENXXXXXXXXXXXXXXXDARGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDRENPPSSSXXXXXXXPP-----------------------VTMRMLGRHEEGVRAVAISADGRWAVTGDRKGIVKVWEVPREAPPGADREPLSSDGAAEAEFEAHKGYVYSLCMSPDARTVVSGGSDKAFRVWDLSLIVYARRMSLNRLRALWTADRLRRARLKR 501          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: D8LF89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF89_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 9.420e-67
Identity = 156/282 (55.32%), Postives = 178/282 (63.12%), Query Frame = 0
Query:  195 MVKQLFTSSS--DGGDA--FSSPRPPPTPPVVRVLACGGTHIPAPPRPMLRSVDVRTKPKADAIV-----QDDDLV-RPSRSNLCTR---RSEYEDNSQ-----------------RAAAKEAGVMTCVAISAAGARGRGILVTGSYDRRVRVLHNVLLSDRDKDPLSASEDTDTAPPLASXXXXXXXXXXXXXXXXXXXXVTMRLLGRHDDGVRAVAISADGRWAVSGDREGGVKVWEVLQEAAPATDRPLCEP----EAEFEAHKGYVFALCMSPNARTL 442
            MV QLF S S  DG  +  FSSP P   PPVVR+LACGGT +PAP +PMLR VDVRT   A A       ++ D+V RP RS+LC     RSE +  +                   AA KEAG+MTCVAISAAGARGRGILVTGSYD+ VRVLHNVL  DR+  P                           XXXXXXXXVTMR+LGRH++GVRAVAISADGRWAV+GDR+G VKVWEV +E  P  DR    P    EAEFEAHKGYV++LCMSP+ARTL
Sbjct:    1 MVTQLFRSGSGSDGAPSPSFSSPAPV-VPPVVRILACGGTFLPAPAKPMLRRVDVRTAAPAGAGADQAGGEEADVVSRPVRSDLCAAAAGRSERDGENXXXXXXXXXXXXXXRGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDRENPPXXXXX----------------------XXXXXXXXVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGLVKVWEVPRETPPGADREPSSPDGAAEAEFEAHKGYVYSLCMSPDARTL 259          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: D8LF88_ECTSI (WD repeat-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF88_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 2.580e-43
Identity = 134/160 (83.75%), Postives = 146/160 (91.25%), Query Frame = 0
Query:    1 MSNLSYHQPKMELEPNKLLSRTIYAHQGYVSSVAFFGPQCEQLITGSYDETAKLWDLKTGLHIQKFQGHTDGVTFVLPGPDGCVLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGHLCGETELDSEVAAVTSPP 160
            MSNLSYHQPK+EL+P +LL+RTIYAH  YVSSVAFFG QC++L+TGSYDETAKLWDLKTGL +QKFQGHTDG+TFV+PGPDG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ GHL GETELDSE+ AV SPP
Sbjct:    1 MSNLSYHQPKVELKPTRLLARTIYAHHSYVSSVAFFGSQCDRLLTGSYDETAKLWDLKTGLALQKFQGHTDGITFVMPGPDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGHLHGETELDSEITAVASPP 160          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: UPI001B88401B (WD40-repeat-containing domain protein n=1 Tax=Suillus bovinus TaxID=48563 RepID=UPI001B88401B)

HSP 1 Score: 58.2 bits (139), Expect = 3.140e-5
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query:   13 LEPNKLLSRTIYAHQGYVSSVAFFGPQCEQLITGSYDETAKLWDLKTGLHIQKFQGHTDGVTFVLPGPDGCVLSA 87
            L P+ +  RT   H+  V +VA F P   +++TGS D T +LWDLKTG  ++K +GH+ GV  +    DG ++++
Sbjct:   90 LIPSTIPPRTFEDHEATVQAVAVF-PDKRRMVTGSEDNTLRLWDLKTGAVLKKMKGHSGGVWALTVSRDGQIIAS 163          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: UPI001B882EA7 (WD40-repeat-containing domain protein n=1 Tax=Suillus fuscotomentosus TaxID=1912939 RepID=UPI001B882EA7)

HSP 1 Score: 53.9 bits (128), Expect = 6.350e-5
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   21 RTIYAHQGYVSSVAFFGPQCEQLITGSYDETAKLWDLKTGLHIQKFQGHTDGVTFVLPGPDGCVLSA 87
            R    H+G++++VA F P   +++TGSYD T  LWDLKTG+ ++K  GH + V  +    DG ++++
Sbjct:   12 RWFEGHEGHINAVAVF-PDKYRMVTGSYDTTLHLWDLKTGVVLKKMVGHRNPVWRLAISRDGQLIAS 77          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: UPI00194ECD24 (hypothetical protein n=1 Tax=Microbispora siamensis TaxID=564413 RepID=UPI00194ECD24)

HSP 1 Score: 56.6 bits (135), Expect = 6.960e-5
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0
Query:  378 VRAVAISADGRWAVSGDREGGVKVWEVLQE-AAPATDRPLCEPEAEFEAHKGYVFALCMSPNARTLVSGGSDKAVRVWDLS 457
            V AVAISADGR AV+ D E GVKVW ++   +  ATD       A  +  +G+V ++ ++P+ +  ++G S  +V VWDL+
Sbjct:  107 VEAVAISADGRLAVTSDLETGVKVWTLVSGMSVDATDI------AALKGQEGWVTSIALTPDGKVALTGISGGSVIVWDLT 181          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: A0A5N7BLL4_9EURO (WD40-repeat-containing domain protein n=1 Tax=Aspergillus bertholletiae TaxID=1226010 RepID=A0A5N7BLL4_9EURO)

HSP 1 Score: 52.0 bits (123), Expect = 8.980e-5
Identity = 23/54 (42.59%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   21 RTIYAHQGYVSSVAFFGPQCEQLITGSYDETAKLWDLKTGLHIQKFQGHTDGVT 74
            +T   H  +V SVAF  P  + + +GS+D+T K+WD KTG+ +Q   GH++ VT
Sbjct:    4 QTFKGHSSWVKSVAF-SPDGQTIASGSWDDTIKVWDTKTGVELQTLNGHSNPVT 56          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: K9R6J1_9CYAN (WD40 repeat-containing protein n=1 Tax=Rivularia sp. PCC 7116 TaxID=373994 RepID=K9R6J1_9CYAN)

HSP 1 Score: 55.8 bits (133), Expect = 9.590e-5
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   27 QGYVSSVAF--FGPQCEQLITGSYDETAKLWDLKTGLHIQKFQGHTDGVTFVLPGPDG 82
            QG++ ++    F P  + L++GSYD T K+WDLK G  I+   GH DGV  VL  PDG
Sbjct:   55 QGHIWTIEALDFTPDGQTLVSGSYDHTVKVWDLKNGKLIRTLDGHKDGVNDVLISPDG 112          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: A0A3M1LBA9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LBA9_9CHLR)

HSP 1 Score: 51.6 bits (122), Expect = 9.870e-5
Identity = 33/81 (40.74%), Postives = 43/81 (53.09%), Query Frame = 0
Query:  374 HDDGVRAVAISADGRWAVSGDREGGVKVWEVLQEAAPATDRPLCEPEAEFEAHKGYVFALCMSPNARTLVSGGSDKAVRVW 454
            H D VRAVA+S DGRW VSG R+  V+ W+     A  T R L   +A        + +L +SP+ R L  G  D+  RVW
Sbjct:    4 HTDWVRAVAVSPDGRWIVSGSRDRTVRAWDP----ASGTPRVLFWNDAP-------ILSLALSPDGRLLACG--DEVGRVW 71          
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Match: K9W2N1_9CYAN (WD40 repeat-containing protein n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9W2N1_9CYAN)

HSP 1 Score: 56.6 bits (135), Expect = 9.910e-5
Identity = 35/101 (34.65%), Postives = 51/101 (50.50%), Query Frame = 0
Query:  375 DDGVRAVAISADGRWAVSGDREGGVKVWEVLQEAAPATDRP-----------LCEPE------AEFEAHKGYVFALCMSPNARTLVSGGSDKAVRVWDLSL 458
            +D VRAVAI+ DG+ AVSG     VKVW++     P T R            + +PE      +    H   V A+ ++P+ +T VSG  D  ++VWDL +
Sbjct:  673 NDFVRAVAITPDGKTAVSGSXXNTVKVWDL-----PGTARSTLPAWLTRIFKMLKPEFTGTALSTLTGHNASVIAVAITPDGKTAVSGSEDNTLKVWDLQI 768          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L7H8_9PHAE1.810e-13760.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF89_ECTSI9.420e-6755.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LF88_ECTSI2.580e-4383.75WD repeat-containing protein (Partial) (Fragment) ... [more]
UPI001B88401B3.140e-538.67WD40-repeat-containing domain protein n=1 Tax=Suil... [more]
UPI001B882EA76.350e-538.81WD40-repeat-containing domain protein n=1 Tax=Suil... [more]
UPI00194ECD246.960e-540.74hypothetical protein n=1 Tax=Microbispora siamensi... [more]
A0A5N7BLL4_9EURO8.980e-542.59WD40-repeat-containing domain protein n=1 Tax=Aspe... [more]
K9R6J1_9CYAN9.590e-546.55WD40 repeat-containing protein n=1 Tax=Rivularia s... [more]
A0A3M1LBA9_9CHLR9.870e-540.74Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
K9W2N1_9CYAN9.910e-534.65WD40 repeat-containing protein n=1 Tax=Crinalium e... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 84..98
score: 37.18
coord: 43..57
score: 39.26
coord: 442..456
score: 40.58
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 100..138
e-value: 7.7E-7
score: 38.7
coord: 364..403
e-value: 0.0013
score: 28.0
coord: 59..97
e-value: 1.6E-6
score: 37.6
coord: 277..319
e-value: 190.0
score: 2.6
coord: 416..455
e-value: 2.2E-8
score: 43.9
coord: 16..56
e-value: 1.4E-5
score: 34.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 419..455
e-value: 7.1E-6
score: 26.7
coord: 63..97
e-value: 6.2E-5
score: 23.7
coord: 21..56
e-value: 0.049
score: 14.5
coord: 371..402
e-value: 0.0019
score: 19.0
coord: 101..138
e-value: 0.004
score: 18.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 371..412
score: 11.176815
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 23..65
score: 11.778342
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 423..457
score: 15.086744
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 66..106
score: 12.714052
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..161
e-value: 1.9E-36
score: 127.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 273..498
e-value: 5.7E-24
score: 86.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..219
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 291..457
coord: 22..146
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 23..60
score: 9.414692
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 423..457
score: 12.446495
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 371..404
score: 9.335602
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 66..102
score: 9.625601
NoneNo IPR availableCDDcd00200WD40coord: 19..455
e-value: 1.58626E-39
score: 142.859
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 43..57
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 442..456
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 84..98
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 21..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig179contigP-littoralis_Contig179:335236..342445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig179.77.1mRNA_P-littoralis_Contig179.77.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig179 335236..342702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig179.77.1 ID=prot_P-littoralis_Contig179.77.1|Name=mRNA_P-littoralis_Contig179.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=506bp
MSNLSYHQPKMELEPNKLLSRTIYAHQGYVSSVAFFGPQCEQLITGSYDE
TAKLWDLKTGLHIQKFQGHTDGVTFVLPGPDGCVLSASEDRTLRVWDADT
GECLRVIRSHSGAVTSLCMAGPDRIVTGSSDKKLRVFDITGHLCGETELD
SEVAAVTSPPPLVPRHQRNRLSASRSGGRGSVGSGGGRAKRKGDMVKQLF
TSSSDGGDAFSSPRPPPTPPVVRVLACGGTHIPAPPRPMLRSVDVRTKPK
ADAIVQDDDLVRPSRSNLCTRRSEYEDNSQRAAAKEAGVMTCVAISAAGA
RGRGILVTGSYDRRVRVLHNVLLSDRDKDPLSASEDTDTAPPLASSAPAA
AIAAAAAAAAPPPPPVTMRLLGRHDDGVRAVAISADGRWAVSGDREGGVK
VWEVLQEAAPATDRPLCEPEAEFEAHKGYVFALCMSPNARTLVSGGSDKA
VRVWDLSLIVYARRMALNRLRALWTTGRLRRGRQTRNSSSSSSNYSLASP
RRSGGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf