prot_P-littoralis_Contig179.71.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig179.71.3
Unique Nameprot_P-littoralis_Contig179.71.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length705
Homology
BLAST of mRNA_P-littoralis_Contig179.71.3 vs. uniprot
Match: A0A6H5L887_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L887_9PHAE)

HSP 1 Score: 486 bits (1251), Expect = 1.960e-154
Identity = 358/693 (51.66%), Postives = 399/693 (57.58%), Query Frame = 0
Query:   26 DSPGTNSCEGMPRALGGGGLRAPAIWDGGSAASGLPGSGGGLSAPPVVCASCEGRGPCSC---GGKGG--------ALRTSSMSSCLCPLPFARSISSDSSGAGGEIGNQTGRNLFTDNSLPYPISGLQQSSLSVGPPL---------------------------------------------------AEGGRSLSGGGGGGVEGDGE-------------VEDFMLMENEDNTNDIHACMRTLQASPAHGGSSNHPPHSDHHAP-----VGFYISALNEAHDNDDDGN-----GGGMDVGSTAGSGSNSTNGG---------GDPFGREEEMDAAEAATALAASNGYGGVEAGPKVGDDHQAVIPDLASVARDGTPLRSSPRPPPLQLWRPGILSRAALDLAFPPPREDGAGSADLEQKMLSAFLVTKANESERCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP-----RPEGAGKGLFRPAATAAPASDYADVFARAEGGTNSLESLAAFVAAGQGGRWRSDWLDEDRAAFRKGIFAFRRDFHRVRARFLPHKAYGDVVEYFYRRWKRNPEYPDWKCTDQLVGRRVAKLVETTHVREGAGPAKRFEVSGLRRGWVVQKEEMLLYGRDEDMFVVRYPKMGVLPVKFERVDLGTLETMLVEGSATEEDRADEGLCDAG 619
            DSPG NSC+G  R LGGG LRA A  DGGSA+   PGSGGG SAPP +  SCEG+   SC   GGKG         ALR  S   CL PLPFARS+S++SS                                                                                         A  GRS SG                        V++  ++   DN +DI  CMRTLQASP HG S                 +GFYIS+L+EA              G MDV   AGS SN   GG          DPFGR+E+   A AAT  +  +     E GPK+GD HQAVIP L+S+  DGTPLRSSPRPPPLQLWRPG+LS AALDLA P P   GAGSA+LEQKML+AFL+ K NESER S  XXXX                XXXXXXXXXXXXXXXXX       R EGAGKGLFR AATA      ADV   +E  T+ L  LAA V AG+G RWRSDW +EDRAAFR+GIFAFRRDFHRVRA FLPHK YGDVVEYFYRRWKRNPEY  WKCTDQLVGRRVAK VETTHVREGAG AKRFE  G+RRGWVV+KE+MLL+GRDEDMFV+RYP+MGV  VKFERVDLGTLETMLVEGSA++EDRA+EGL D+G
Sbjct:  327 DSPG-NSCKGTKRPLGGG-LRASASCDGGSASDAPPGSGGGFSAPPALFESCEGKEAGSCSDAGGKGXXXXXXXXXALRPPSTI-CLSPLPFARSMSTESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGIGRSASGXXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXXXXXIGFYISSLDEAXXXXXXXXXXXXXSGDMDV-EGAGSRSNGALGGXXXXXXXXXADPFGRQEDSYGA-AATLTSYDD-----EVGPKIGDSHQAVIPKLSSMTEDGTPLRSSPRPPPLQLWRPGVLSHAALDLALPKPCPGGAGSAELEQKMLAAFLIAKTNESERRSDGXXXXRDSLSACGSSDGGDAAXXXXXXXXXXXXXXXXXXXXXXXSRAEGAGKGLFRAAATAT----AADVTGASERDTDGLHGLAAVVMAGEGARWRSDWSEEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKRFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDRAEEGLEDSG 1005          
BLAST of mRNA_P-littoralis_Contig179.71.3 vs. uniprot
Match: D8LF90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF90_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.800e-71
Identity = 209/543 (38.49%), Postives = 236/543 (43.46%), Query Frame = 0
Query:  110 ISSDSSGAGGE-IGNQTGRNL------FTDNSLPYPISGLQQSSLSVGPPLAEGGRSLSGGGGGGVEGDGE------------VEDFMLMENEDNTNDIHACMRTLQASPAHGGSSNHPPHSDHHAPV-----GFYISALNEAHDNDDDGN----GGGMDVGSTAGSGSNSTNGGG-----------DPFGREEEMDAAEAATALAASNGYGGVEAGPKVGDDHQAVIPDLASVARDGTPLRSSPRPPPLQLWRPGILSRAALDLAFPPPREDGAGSADLEQKMLSAFLVTKANESERCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPEGAGKGLFRPAATAAPASDYADVFARAEGGTNSLESLAAFVAAGQGGRWRSDWLDEDRAAFRKGIFAFRRDFHRVRARFLPHKAYGDVVEYFYRRWKRNPEYPDWKCTDQLVGRRVAKLVETTHVREGAGPAKRFEVSGLRRGWVVQKEEMLLYGRDEDMFVVRYPKMGVLPVKFERVDLGTLETMLVEGSATEEDRADE 613
            +S++SSGAGG  + N   RNL      FTD    Y  S LQ +S S G   A  GRS SG                       V++  ++   DN +DI  CMRTLQASP HG S                  GFYIS L                G MDV    G+GS S                DPFG+EE  D+  AA AL + +     E GPK+GD HQAVIP L+SV  DGT LRSSPRPPPLQLWRPG LS AALDLA P PR  GAGSA+LEQKM                                                                                                                                                         RWKRNPEY  WKCTDQLVGRRVAK VETTHVREGAG AKRFE  G+RRGWVV+KE+MLL+GRDEDMFV+RYP+MGV  VKFE  DLGTLETMLVE SA++EDR +E
Sbjct:    1 MSTESSGAGGGGVANDLRRNLLGEGDGFTDGG--YSFSSLQSTS-STGTHPAGIGRSASGXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXXXXXXGFYISXLXXXXXXXXXXXXXXXSGDMDV---EGAGSRSXXXXXXXXXXXXXXXXDPFGQEE--DSFGAAAALTSYDD----EVGPKIGDSHQAVIPKLSSVTEDGTTLRSSPRPPPLQLWRPGALSPAALDLALPKPRPGGAGSAELEQKM---------------------------------------------------------------------------------------------------------------------------------------------------------RWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKRFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFEG-DLGTLETMLVERSASDEDRGEE 377          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.71.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L887_9PHAE1.960e-15451.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF90_ECTSI3.800e-7138.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 461..524
e-value: 8.3E-11
score: 43.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 616..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig179contigP-littoralis_Contig179:325934..331136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig179.71.3mRNA_P-littoralis_Contig179.71.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig179 323655..331136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig179.71.3 ID=prot_P-littoralis_Contig179.71.3|Name=mRNA_P-littoralis_Contig179.71.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=705bp
MSESELVAWKTVSTPPERGGADGGVDSPGTNSCEGMPRALGGGGLRAPAI
WDGGSAASGLPGSGGGLSAPPVVCASCEGRGPCSCGGKGGALRTSSMSSC
LCPLPFARSISSDSSGAGGEIGNQTGRNLFTDNSLPYPISGLQQSSLSVG
PPLAEGGRSLSGGGGGGVEGDGEVEDFMLMENEDNTNDIHACMRTLQASP
AHGGSSNHPPHSDHHAPVGFYISALNEAHDNDDDGNGGGMDVGSTAGSGS
NSTNGGGDPFGREEEMDAAEAATALAASNGYGGVEAGPKVGDDHQAVIPD
LASVARDGTPLRSSPRPPPLQLWRPGILSRAALDLAFPPPREDGAGSADL
EQKMLSAFLVTKANESERCSGGGGGDTSGRESAAGAAAAAAAAAAAAAAA
AAAAAAAAAAPRPEGAGKGLFRPAATAAPASDYADVFARAEGGTNSLESL
AAFVAAGQGGRWRSDWLDEDRAAFRKGIFAFRRDFHRVRARFLPHKAYGD
VVEYFYRRWKRNPEYPDWKCTDQLVGRRVAKLVETTHVREGAGPAKRFEV
SGLRRGWVVQKEEMLLYGRDEDMFVVRYPKMGVLPVKFERVDLGTLETML
VEGSATEEDRADEGLCDAGDTGDGSFGGSGGRHLLYDTAPTGGVGNRGGD
SGGSHHSGLTGVMAGGHRGPLGGQQRISRQAELGSADDSDNDCAKEQDDE
RGGDG
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