mRNA_P-littoralis_Contig179.44.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A6H5KJ68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ68_9PHAE) HSP 1 Score: 538 bits (1386), Expect = 4.180e-168 Identity = 528/1192 (44.30%), Postives = 648/1192 (54.36%), Query Frame = 2
Query: 83 MSLKDAVGALRSLKAEXXXXXXXXXXXXXAYRGVLE----------ELRVAKGAQQHQQGAKSQ---NENDD---------GIAEPPKETDERRMALEEEARGLRQELAAVKARAEESXXXXXXXXXXXXXXXXXXXXXXERARAEVEAAEGTLVMEXXXXXXXXXXXXXXXXXXXXLRTRLDETSKELESARDAIAADGTSR---SREEGEDIAELESELKSIREAVVAQPLSSPESTETQAAASRSAASMAALEDAVASAAERANHLEKDLASVAQENLEMRESMETFKRKEEEESKQRLAQHGEAAAERELEMKRLNLRLAEAEQAAE-------EAQQKAAQDKASSEDSVSALTDAHEKARAEVATXXXXXXXXXXXXXXXXXLVVSEGARKDEEASXXXXXXXXXXXXXXXXXXXXXAAALERES-------------------LTSAVALSRITELETALRESEASRSSLLASAAAERETRDAEGDAAAAAXXXXXXXXXXXKESAEEEVRKAEVRVSTAEATVLHLQSQVATLXXXXXXXXXXXXXXXXXXXXXXVARTEASESKRGVEETLLMANKELQRLKIKCEEALSESKGLREECGRLTSTVETLRAAANETASDYSSNTRESTLAVQPGMGKEIKEGVKGEEDLSSSVRESREEILYLRKTIEELERAREEVDLPRSRV-------------ERGDQEEGKGDETGGETMKEATREVFEERDSLRAELGEEKQKAAARVAGLEMQLADQEREAEDTQRRLYLRQSELETELEDLNAHHDALRVEMARMDASMQDAADASF---PSSSXXXXXXXXXXXXXXXXXXXXXXXXRDGSAAARKALGRDPADMGAEVGGAVGGIFRGKFWSGWGGRGGXXXXXXXXXXXXXXXXGSAAASKRSTARGRGGGGTGN-----------------------------FPGGVAGAAAEADQEQSISRVRQNMMARLQEATTQSVSRHEQEDQEQSNAGGDRGNAVNTKIGVRSDISGTSRRATGSGGNGERAETDVLEASDGGGAVAAGVVEEEWVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSRRSPLDESLALGDGSPGANDGTSSREKILWDLRVKVDLAG 3370
MSLKDAV ALRSLK XXXXXXXXXXXX AYRGVL ELR+AK +Q + S+ N NDD GIAE +E ERR LEEEAR LR+ELAAVKARAEE+ E A + AA+G LV E LRTRL++T+ ELESAR+A+ DGT+R S G+D + ++ LK IR+A+ AQP SSP TE Q A A EDAVASA E+ N L+++L S ++N+E+R +E +++EEEE++ RL Q GEAAA + ++ +LAE+ + E +Q+ A+ +AS + VSAL E A EVA+ LVV+ R++E ++ XXXXXXXXXXXXXXXX AAAL E+ ++ ALSR+ ELET LRE+EA R SLL +AA+ DA+ A AA KE+A+EE XXXXXXXXXXXX VA + E++ VEETLLMANKELQRLKIK EEALS S GLREEC L +TVETLRAAA A D + + + AV + D + E E LR +EE++R +EV + R V D+EEG G G+ R++ ERDSLRAEL EK+ DTQRRLYLRQSELETELEDLNAHHDALRVE+ARMDAS+++A+DAS PSSS GS A+ K+ GRDPA +GAEVGGAVGGI RGKFWSGWGG GS ++ + GGG TG+ G AGA EADQ SISRVR+NMMARLQEA R + +Q++++ G D N +G + + + A+G+ N E ++ + SD G A A VE+EWVEE V+HP PDYG++SPVIRYLLQQWS++PDK++YLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIR GGIPVLVHSRRSP +ES G G+P DG S+E LWDLRVKVDL G
Sbjct: 1 MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVLNVRVIRFFVAAELRLAKEDKQLEGQDPSRSVGNTNDDDAPWRGDDSGIAEVERE--ERRETLEEEARCLREELAAVKARAEEAVASINQELEEAVCAR-------ESACSAAAAAQGELVQEKARAAAAERQLKGATEEAAQLRTRLNDTTTELESARNALETDGTNRVGKSTNNGDD--DEDAALKLIRDAITAQPPSSPARTEGQ-----EAVRPVASEDAVASALEKVNQLQEELESTVRDNVELRRLIENTRQREEEENQHRLVQEGEAAAA----LAAMSSQLAESTEELEGLRERLKNVEQEEARIRASCSEKVSAL----EAAEGEVASLGASLAHTTEALEEARQLVVT---REEESSTAQRXXXXXXXXXXXXXXXXSNAAALAAEAEEGRAXXXXXXTVVLXXXXXXTSEALSRVKELETTLRETEAGRESLLDTAAS-----DAKKIEALAADVAKGLEE---KEAAKEEXXXX----------XXXXXXXXXXXXXXXXXXXXXXXTMAEAEKAHKVAVEKEVEARLAVEETLLMANKELQRLKIKNEEALSASNGLREECEVLKATVETLRAAAVAAAGDGGNKLNDVSTAVAT------------QTDEAEENEEKEGEFARLRAVVEEMKRGGDEVGVVRGCVGDVSSHDGRDPDDSGSDEEEGDGARRHGKGRASTKRQILAERDSLRAELASEKEXXXXXXXXXXXXXXXXXXXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASLRRIPSSSATSMVGRGGGRLRAGG----------GSVASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGG-------------------GSVTSADTN-----GGGSTGDAGXXXXXXXXXXXXXXXXXXXXXXXXXXKISAGAAGAG-EADQR-SISRVRENMMARLQEAA-----REGKAEQKETSGGAD--GVKNKDVGHANTNNSGLQGASGN--NMEETRSENKDVSDVGMAAAPRTVEDEWVEENVEHPPPDYGLESPVIRYLLQQWSTDPDKIKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGTPAYPDG-HSKETALWDLRVKVDLNG 1089
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: D8LFB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB2_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 4.750e-127 Identity = 468/1142 (40.98%), Postives = 547/1142 (47.90%), Query Frame = 2
Query: 83 MSLKDAVGALRSLKAEXXXXXXXXXXXXXAYRGVLEELRVAKGAQQHQQGAKSQ---NENDD---------GIAEPPKETDERRMALEEEARGLRQELAAVKARAEESXXXXXXXXXXXXXXXXXXXXXXERARAEVEAAEGTLVMEXXXXXXXXXXXXXXXXXXXXLRTRLDETSKELESARDAIAADGTSRSREEGEDIAELESELKSIREAVVAQPLSSPESTETQAAASRSAASMAALEDAVASAAERANHLEKDLASVAQENLEMRESMETFKRKEEEESKQRLAQHGEAAAERELEMKRLNLRLAEAEQAAEE-------AQQKAAQDKASSEDSVSALTDAHEKARAEVATXXXXXXXXXXXXXXXXXLVVSEGARKDEEASXXXXXXXXXXXXXXXXXXXXXAAA----------------LERESLTSAVALSRITELETALRESEASRSSLLASAAAERETRDAEGDAAAAAXXXXXXXXXXXKESAEEEVRKAEVRVSTAEATVLHLQSQVATLXXXXXXXXXXXXXXXXXXXXXXVARTEASESKRGVEETLLMANKELQRLKIKCEEALSESKGLREECGRLTSTVETLRAAANETASDYSSNTRESTLAVQPGMGKEIKEGVKGEEDLSSSVRESREEILYLRKTIEELERAREEVDLPRSRVERGDQEEGKGDETGGETMKEATREVFEERDSLRAELGEEKQKAAARVAGLEMQLADQEREAEDTQRRLYLRQSELETELEDLNAHHDALRVEMARMDASMQDAADASF---PSSSXXXXXXXXXXXXXXXXXXXXXXXXRDGSAAARKALGRDPADMGAEVGGAVGGIFRGKFWSGWGG--------RGGXXXXXXXXXXXXXXXXGSAAASKRSTARGRGGGGTGNFPGGVAGAAAEADQEQSISRVRQNMMARLQEATTQSVSRHEQEDQEQSNAGGDRGNAVNTKIGVRSDISGTSRRATGSGGNGERAETDVLEASDGGGAVAAGVVEEEWVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSRRSPLDESLALGDGSPGANDGTSSREKILWDLRVKVDLAG 3370
MSLKDAV ALRSLK XXXXXXXXXXXX AYRGVL ELR+AK +Q + S+ N NDD G AE +E E R LEEEAR LR+ELAAVKARAE LKSIR+ + AQP SSP TE Q A A EDAVASA E+ N L+++L S ++N+EMR +E +++EEEE++ RL Q GEAAA + ++ +LAE+ + E +Q+ A+ KAS ++VSAL E + EVA+ L V+ XXXXXXXXXXXXXXXXXXXX AA LERE ++ ALSR+TELET LRE+EA R SLL +AA+ DAE A AA KE+A+EE XXXXXXXXXXX VA + E++ GVEETLLMANK V ERDSLRAEL EK++A+ R AGLE QLAD+EREA DTQRRLYLRQSELETELEDLNAHHDALRVE+ARMDAS+++A+DASF PSSS GS A+ K+ GRDPA +GAE I RGKFWSGWGG GG XXXXXX R RG G G G AGA EAD QSISRVR+NMMARLQEA + EQ G G N +G + + S+ A+G N E +DV SD G A A VE+EWVEETV+HP PDYG++SPVIRYLLQQWS++PDKL+YLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIR GGIPVLVHSRRSP +ES+ G G+P + D + S+E LWDLRVKVDL G
Sbjct: 1 MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVLNELRLAKEPKQKEGQDPSRSVGNNNDDDAPRRGDESGTAEVERE--EWRETLEEEARCLREELAAVKARAE-----------------------------------------------------------------------------------------------------LKSIRDTITAQPPSSPARTEGQ-----EAVRPVASEDAVASALEKVNQLQEELESTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAAN----LAAMSSQLAESTEELEGLRERLKGVEQEEARIKASCSENVSAL----EASEGEVASLGASLAHTTEALEEAQQLAVTREEESSNAQRXXXXXXXXXXXXXXXXXXXXALAAEAEEGXXXXXXXXXVVLERERAATSEALSRVTELETTLRETEAGRKSLLDAAAS-----DAEKIEALAADVAKGLEE---KEAAKEEXXXX----------XXXXXXXXXXXXXXXXXXXXXXETMVEAEKAHKVAVEKEVEARLGVEETLLMANK------------------------------------------------------------------------------------------------------------------------------------VMAERDSLRAELASEKEQASMRAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMGGRGGGRLRAGG----------GSVASPKSTGRDPASIGAEXXXXXXXILRGKFWSGWGGGSVTSADTNGGGSTGEAGAGKXXXXXXXXXXXXXREGGRGYG---EGKISTGAAGAG-EADH-QSISRVRENMMARLQEAAREGKV-------EQKETSGGAGGVKNKDVGGANTDNSGSQGASGE--NKEETGSDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESIPAGAGTPTSPD-SHSKETALWDLRVKVDLNG 851
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A7S2DMV1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMV1_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.250e-23 Identity = 43/84 (51.19%), Postives = 64/84 (76.19%), Query Frame = 2
Query: 2978 WVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGG 3229
W +E+ HP P +G++ PVI++LL W+S+P KLRY+SLWL + +++ + FP+GLQLV L PEIKDGFLTL++P++R + G
Sbjct: 32 WEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRG 115
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A7S2DLI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLI1_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.110e-23 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 2
Query: 2978 WVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSR 3253
W +E+ HP P +G++ PVI++LL W+S+P KLRY+SLWL + +++ + FP+GLQLV L PEIKDGFLTL++P++R + G V V R
Sbjct: 32 WEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRGSRVSVKVR 123
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A7S2SI89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SI89_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.980e-20 Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 2
Query: 2978 WVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIER---RKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIR 3217
W ET +P P +G+ SPVI++LL W+S+P KLRY+SLWL +I VP++FPSGLQL+GL PEIKDGFLTL++PM++
Sbjct: 203 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLK 285
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A7S2SIB0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIB0_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.160e-19 Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 2
Query: 2978 WVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIER---RKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIR 3217
W ET +P P +G+ SPVI++LL W+S+P KLRY+SLWL +I VP++FPSGLQL+GL PEIKDGFLTL++PM++
Sbjct: 655 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLK 737
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A8K1C2V5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2V5_PYTOL) HSP 1 Score: 99.8 bits (247), Expect = 1.980e-18 Identity = 44/102 (43.14%), Postives = 68/102 (66.67%), Query Frame = 2
Query: 2954 AAGVVEEEWVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWL-RCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSRR 3256
++G +E W E+ ++HP P + +DSP ++YLLQ W+ KL+Y+ WL V+E +PD FP G++L L PEI+DGFLTLV+P++R + VH+R+
Sbjct: 263 SSGGIEFAWQEDLIRHPTPHFDLDSPEVQYLLQSWTQNIKKLQYIRTWLTHVVVETADLPDDFPMGIELPRLLPEIRDGFLTLVVPLLRKQTRREIQVHTRQ 364
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A662Y4D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.810e-17 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2
Query: 2978 WVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWL-RCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSRR 3256
W EE V+HP P + +DSP + YLL W++ K++YL WL + V+ R +P FP G++L L PE++DGFLTLV+P++R +L HSRR
Sbjct: 298 WQEELVRHPTPHFDLDSPEVTYLLHAWTANVKKMQYLRRWLTQVVVTRGPLPADFPMGVELPRLPPEVRDGFLTLVVPLLRRQTEREILAHSRR 391
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A484ECE1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECE1_BRELC) HSP 1 Score: 95.1 bits (235), Expect = 4.470e-17 Identity = 43/101 (42.57%), Postives = 66/101 (65.35%), Query Frame = 2
Query: 2957 AGVVEEEWVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWLRCVIERR-KVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSRR 3256
A V +W EE V+HP P + ++SP + YLL+ W+ + K RYL WL V++ + +PDAFP ++L L+PE++DGFLTLV+P++R +L H R+
Sbjct: 234 ADTVNSKWFEELVRHPTPHFDLNSPEVAYLLRAWTIDMKKWRYLRRWLLQVVQTKGPLPDAFPMAVELPRLSPEVRDGFLTLVLPLLRKQTERDILAHCRK 334
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Match: A0A225W8L9_9STRA (RxLR effector protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8L9_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.290e-17 Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 2
Query: 2912 ETDVLEASDGGGAVAA----GVVEEEWVEETVKHPAPDYGVDSPVIRYLLQQWSSEPDKLRYLSLWL-RCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRLAGGIPVLVHSRR 3256
E V + D GG A V W EE V+HP P + + SP + Y+L+ W+ K+RYL WL + V + +PD FP G++L L PE++DGFLTLV+P++R +L HSRR
Sbjct: 229 EAKVTKPQDDGGRARAPADADAVIPTWQEELVRHPTPHFDMQSPEVAYILRAWTKNIKKMRYLRRWLIQVVTTKGPLPDDFPMGVELPRLPPEVRDGFLTLVLPLLRKQTEREILAHSRR 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.44.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig179.44.2 >prot_P-littoralis_Contig179.44.2 ID=prot_P-littoralis_Contig179.44.2|Name=mRNA_P-littoralis_Contig179.44.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1136bp MSLKDAVGALRSLKAELEASRSSKRELEVAYRGVLEELRVAKGAQQHQQGback to top mRNA from alignment at P-littoralis_Contig179:204458..214280- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig179.44.2 ID=mRNA_P-littoralis_Contig179.44.2|Name=mRNA_P-littoralis_Contig179.44.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9823bp|location=Sequence derived from alignment at P-littoralis_Contig179:204458..214280- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig179:204458..214280- >mRNA_P-littoralis_Contig179.44.2 ID=mRNA_P-littoralis_Contig179.44.2|Name=mRNA_P-littoralis_Contig179.44.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3408bp|location=Sequence derived from alignment at P-littoralis_Contig179:204458..214280- (Pylaiella littoralis U1_48)back to top |