mRNA_P-littoralis_Contig179.38.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig179.38.4
Unique NamemRNA_P-littoralis_Contig179.38.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig179.38.4 vs. uniprot
Match: A0A6H5KK71_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK71_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 9.080e-81
Identity = 162/261 (62.07%), Postives = 177/261 (67.82%), Query Frame = 2 
Query:   95 KDPPAIPWADFRGKSPKLGQTPPSTLLYNPQPRPRFV--VPQSSSGEQVSKRGPPLGGRGASGYWQFRTSKLSEQAPREVSQLFHGLSFYFNGRTGDKQTMHLKGAVSKYGGRTTPFMSMRGVTHVIAENLSAVKTHKAMKSLKMKVVHPDWLSRCIEEGKLLPDAPFRVVRSQKLGMDKFLGSSXXXXXXXXXXXXXXXXPDSSTCDRDDGRCRS-AQKENETIGSPRRHLSSRRKVPAAPGARG-ERRHGEKILESRDR 865
            KDP A       GK     Q      LYNP PR +FV   P  S+  +  K+GPPLGG GASGYWQFRTSKL EQAP  VS++F GLSFYFNGR+GDKQTMHLKGAVSK+GGRTTPFMSM+GVTHVIAENLSAVKT KAMKSLKMKVVHPDW++RCI EGKLLPDAPFRVVRSQKLGMDKF GSS                  S  C+ D+GR  + AQKEN     PR H S  RK  A   A G E R G +  ESR R
Sbjct:    8 KDPSAAARLGSGGKQQTKCQ-----FLYNPNPR-QFVFPAPNLSNDGRSDKKGPPLGGGGASGYWQFRTSKLLEQAPAGVSEIFAGLSFYFNGRSGDKQTMHLKGAVSKHGGRTTPFMSMKGVTHVIAENLSAVKTDKAMKSLKMKVVHPDWVNRCIAEGKLLPDAPFRVVRSQKLGMDKFFGSSSSAPVSSP----------SPGCNDDEGRRNNRAQKENGKEAKPRHHRSVPRKSGAVVRAGGIEGRRGRRNRESRGR 252
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BLAST of mRNA_P-littoralis_Contig179.38.4 vs. uniprot
Match: A0A507E694_9FUNG (BRCT domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E694_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.660e-15
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 2 
Query:  278 YWQFRTSKLSEQAPREVSQLFHGLSFYFNGRTGDKQTMHLKGAVSKYGGRTTPFMSMRGVTHVIAENLSAVKTHKAMK-SLKMKVVHPDWLSRCIEEGKLLPDAPFRVV 601
            Y Q R  KL++Q   +VS++F G+  Y NG  G       +  V K+GG  +  + +R VTH+I  +LS +KT K ++ S  +K+V PDW+  C+E+GK +P+ P++V+
Sbjct:   62 YAQARDFKLAQQRAEQVSRIFQGVRVYVNGYVGTDDH-DFRQLVMKHGGDISTNLKLRSVTHMICTSLSGIKTDKFLRGSANVKIVRPDWIMDCVEQGKRVPEGPYKVI 169
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BLAST of mRNA_P-littoralis_Contig179.38.4 vs. uniprot
Match: A0A0G4IYX9_PLABS (BRCT domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYX9_PLABS)

HSP 1 Score: 73.2 bits (178), Expect = 3.280e-11
Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 2 
Query:  332 QLFHGLSFYFNGRTGDKQTMHLKGAVSKYGGRTTPFMSMRGVTHVIAENLSAVKTHKAMKSLKMKVVH---PDWLSRCIEEGKLLPDAPFRVVRSQKLGMDKF 631
            Q+F G+  YFNGR+G+   + LK  V   GGR  P +S++ VTHV+ ENLSA+K+ K + S     VH   P+W+   I+  K + +  +R V S+   +  F
Sbjct:   61 QVFQGVCVYFNGRSGEFSALQLKSFVRLCGGRIAPMLSVKVVTHVVCENLSAIKSAKVVASGPKSRVHFVRPEWILDSIKGAKRVREHAYRAVSSRTTEITSF 163
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BLAST of mRNA_P-littoralis_Contig179.38.4 vs. uniprot
Match: M5GAE6_DACPD (DNA repair protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GAE6_DACPD)

HSP 1 Score: 58.9 bits (141), Expect = 4.350e-5
Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  284 QFRTSKLSEQAPREVS----QLFHGLSFYFNGRTGDKQTMHLKGAVSKYGGRTTPFMSMRG-VTHVIAENLSAVKTHKAMKSLKMKVVHPDWLSRCIEEGKLLPDAPFRVVRSQKLGMDKFLGS 640
            Q +  ++ EQ     S    ++F GL+ + NG T       L+G +++ GG    ++  +G VTHV+A NL+  K    ++   MK+V PDW+++ +E G LLP   F +  S+   +D+  GS
Sbjct:  194 QVQNDEMEEQNEANGSAGKPKIFRGLAIHINGFT-IPSVQVLRGMITQNGGTYHAYLDKKGLVTHVVASNLTPAKV---LEFKHMKIVTPDWITKSVEAGLLLPWRDFILHPSEMDRLDEAQGS 313
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.38.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KK71_9PHAE9.080e-8162.07BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A507E694_9FUNG1.660e-1537.61BRCT domain-containing protein n=1 Tax=Powellomyce... [more]
A0A0G4IYX9_PLABS3.280e-1137.86BRCT domain-containing protein n=1 Tax=Plasmodioph... [more]
M5GAE6_DACPD4.350e-531.45DNA repair protein n=1 Tax=Dacryopinax primogenitu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig179contigP-littoralis_Contig179:193413..201664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog109760.SPPG_07441T0
PFAMsBRCT_2,PTCB-BRCT
Model size2413
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.25e-17
EggNOG OGsCOG0389@1|root,KOG2093@2759|Eukaryota,3A7UN@33154|Opisthokonta,3P5TJ@4751|Fungi
Descriptionbreast cancer carboxy-terminal domain
Cds size1437
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig179.38.4prot_P-littoralis_Contig179.38.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig179 194316..201591 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789858.2945228-UTR-P-littoralis_Contig179:193412..1943151680789858.2945228-UTR-P-littoralis_Contig179:193412..194315Pylaiella littoralis U1_48UTRP-littoralis_Contig179 193413..194315 -
1680789858.3676016-UTR-P-littoralis_Contig179:201591..2016641680789858.3676016-UTR-P-littoralis_Contig179:201591..201664Pylaiella littoralis U1_48UTRP-littoralis_Contig179 201592..201664 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789858.3108523-CDS-P-littoralis_Contig179:194315..1952861680789858.3108523-CDS-P-littoralis_Contig179:194315..195286Pylaiella littoralis U1_48CDSP-littoralis_Contig179 194316..195286 -
1680789858.3237894-CDS-P-littoralis_Contig179:195674..1957021680789858.3237894-CDS-P-littoralis_Contig179:195674..195702Pylaiella littoralis U1_48CDSP-littoralis_Contig179 195675..195702 -
1680789858.3332634-CDS-P-littoralis_Contig179:199864..1999881680789858.3332634-CDS-P-littoralis_Contig179:199864..199988Pylaiella littoralis U1_48CDSP-littoralis_Contig179 199865..199988 -
1680789858.342792-CDS-P-littoralis_Contig179:200344..2004291680789858.342792-CDS-P-littoralis_Contig179:200344..200429Pylaiella littoralis U1_48CDSP-littoralis_Contig179 200345..200429 -
1680789858.3554535-CDS-P-littoralis_Contig179:201362..2015911680789858.3554535-CDS-P-littoralis_Contig179:201362..201591Pylaiella littoralis U1_48CDSP-littoralis_Contig179 201363..201591 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig179.38.4

>prot_P-littoralis_Contig179.38.4 ID=prot_P-littoralis_Contig179.38.4|Name=mRNA_P-littoralis_Contig179.38.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=479bp
MERSRNDKDPPAIPWADFRGKSPKLGQTPPSTLLYNPQPRPRFVVPQSSS
GEQVSKRGPPLGGRGASGYWQFRTSKLSEQAPREVSQLFHGLSFYFNGRT
GDKQTMHLKGAVSKYGGRTTPFMSMRGVTHVIAENLSAVKTHKAMKSLKM
KVVHPDWLSRCIEEGKLLPDAPFRVVRSQKLGMDKFLGSSSSPPSSSSSS
SSSSSAPDSSTCDRDDGRCRSAQKENETIGSPRRHLSSRRKVPAAPGARG
ERRHGEKILESRDRRGGAGGKRGRDGSGVASAAGAAPDKSSNGLEGSRRS
KNGASNNRSVSRRTNSSTISCKRGASSSIKDGSHAGRNAPRLGGSMHDRV
GLEAPESNARLYRPGHTKNITTPRKRCRDTGEILLPPSRTITASSSLVRG
GEKRGSTIARKETVSSLPIDVTVLYSPSWTIKTHQTTAGSNNRVLSAGAQ
RLAGGEKRRRPAGGGGGKGPARFAPVTN*
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mRNA from alignment at P-littoralis_Contig179:193413..201664-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig179.38.4 ID=mRNA_P-littoralis_Contig179.38.4|Name=mRNA_P-littoralis_Contig179.38.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=8252bp|location=Sequence derived from alignment at P-littoralis_Contig179:193413..201664- (Pylaiella littoralis U1_48)
AGTCAGTCCCCTTGTCGTGTGTCTCTCTCCACCTTTTACGTAGTCATCGG
GGATTACAGCGGTAGGACCAACCATGGAAAGATCCCGAAATGATAAGGAT
CCCCCAGCGATACCATGGGCGGATTTCCGCGGCAAGTCCCCGAAACTTGG
TCAAACACCACCATCAACCCTCCTTTACAACCCTCAACCGCGCCCCCGAT
TCGTCGTCCCTCAAAGTAGCAGCGGCGAACAGGTTAGCAAGAGAGGACCG
CCGCTTGGTGGAAGGGGTGCATCAGGCTACTGGCAATTCAGGACGTCCAA
ACGTGAGAAACTGAGGGGGGGGATGCCGTTTTGTGTGTGCAACGCGGGGG
GTTTTGGCCCCCCTCTGTTGGAGAGAAGAGGAGGGCTGTGTCAAAATAGA
TACCGGGTGCTGGTCAGTTACGGTCAGTACGAGTAAAATGTCGGAGTGGC
TCCCGAAAAAGTGCCAACGGCCAGATTGTTCCCAGATTTTTTTATCGTAC
ATCTTCTTTTGATCCAGTGCTTTCAGTTTTCAGTTTTTCAAACGCAAACG
CGACGCTTACACTTGTACAGTAAACAAGCACCCCGGGTGCGCTGAACACA
AACCAGCGGCGCTCCGTAGTTCTGTCCATGTGGGCCTGCCTCCCTTGAGT
GCTACTCAAGTACTATGTTGACGTGTGTTGAGCTGACAAGCGGGTTGTGT
CGAGGGCGTGTGTGTGGACCGTTATGACCGACATGATAAATACCATGAGC
GGTTTCGCCACGAACACGGCGATACAGCCGGCTTGCTTCTGACGACGGCA
GAGCACTATTTACAAGTACAGCACGGAAGGCAGCAGCGAAAAGAGTTTAG
GCCACTGCTGTACTCCTCTGGCTCTTTAATCACGTTGCGCTCCACGTAAC
AATGGAGCACGCGTGATGCGAAGCTTCCTGTATCGGTTCAAACGTCAGCA
ACGCAATGCCGCCAACATGTACCATGTACCTGGTACTGTGGCAGAGCAGT
AGTAGAATACATGCTGCGGCTACATCAATAATTACACAACGTTGTAGCTG
TTGAATGCTGTTGCTCGCTCTTCAGCCGATTCCACAGCTTTCCGTAAGGT
CTCCTACAGAGCAATAATTTGTTTGAGGTTAAAAAAATGCAATCGAGGAA
CCGCCTCCATTCACGAAAGTTTGATGTGCCACCACACACGACGCCCCCCT
GTGTGCCCCGAATTTCGTTCACGTGTGAGAGACAGTCTCAGAACAAGCGC
CGAGAGAAGTCTCGCAGCTTTTTCACGGTCTGAGCTTCTACTTCAACGGA
CGCACCGGGGACAAGCAGACGTGAGGGTCGCGAGCGTACTTTTTATCACA
AGCCGCTACCACATTTTTAGGTGGCGGAGTTTTTGGTCTATCATGTTGAC
GTAGCAACCTAACCTGCTTGGTCGTGACGTAACGATGCTCCTTTTTTCCT
TCAAGTCCTTCTGCCTGTCTCTCTTTTGCTTCTCCCCACTCCATTTCTTA
CCACCCTCTGTACGTATGATATGCACACAAAAAAGTACCAGATGTGGGCA
TTTACAGTCCCTTTCTATCAAAAAAATATCTCTAGAACTCTCCCCCGAGA
CCCGATACACTCGCTTATGAAATCAGTCGCAAGAAAAATATGTTCGCGTT
CGGATACAATGCTGATGCTGCTGCAGGATGCATCTGAAGGGCGCCGTCAG
CAAGTACGGAGGGCGAACCACGCCTTTCATGTCGATGAGGGGAGTCACAC
ACGTCATTGCGGAAAACCTGAGCGCCGTGAAGACTCATAAGGCCATGAAG
GTACATCGGTGTTGACTCTAACCCAGGGACCAACTTGAACCTTGAGAAAT
GCCCCCCCACCGACCCCAAACAAGCCCATGCCATGATTTCGTGTAATGTT
TTTTTTCCAAAAGAGCCGATGGTCTTCTCACGGTATTGCATGCCTGCTAC
CATTTTCGTCCAGTATTGCCGGTGTAAATGTGCTGCTACGTAAAAGAAGC
TCTTGTCCCTACCTACGGCGCAAGAGAGTGTAGATTTCACGAAAAATGGA
AAAGAAAAAATTCTTCTACGGTAAAATTTGGGACGTTCAGCTCTCAAAGC
GAGTTTTTTTCGCTTCGCGTTCCCGTGTGAAAGTGTGACCAGGAATACTG
CTGGTGTCAACGTAAGATTCGACCGAGACGTCGCGCTGCAGCCGCATGAC
GTGTATCGAAATCGTCCCCGGGAGACACGCCATGATGTCATCTCGCAGCG
CGCATGCTCGTGTGTAGGCCATCAGAAGTCCGCTGTCAGATTCTCAGATA
CCCCCCCTTTTGAAGCAAAATAGACCACCCTAAACATGATACAAGTATCA
GTAGAAGACACCATGTAGCGGCGATAGTGTGTATTGGAACCCTCAGATCT
GCTGCTGGGTTGTGGTGTCAGAGGTGAAAAGTATTATTTGTTCAAGCCAT
CCAGACACCGTCCACATCTTCTCAGCAGCAATAACCAACATCTTCTACTG
CGCTGCTGCTGTACTCACAACCACGATCCCTTGAAGTGATATTCTGCAGT
AAACAGCTGGAGCTCATAGCTGCACCGTATTGGACCTGTTGCAGAGTTGC
AGTTTTAGAGATATGGGTTCGTGGTGGTAGGTCCAGCAGAAGTAGATATC
AATGCTGGTTTGTTGCGGGCTGAGATGCGGACGATTTACAAACTGCTTGA
ACAAACACTGCTGCATATGATAGGCCACTACAGTATTTGATCTCCGACTC
ACTGTCCTGGCCGCAGACCTCAGTGTACCAATACACACGGCGCCCCGACA
TGATGTCATCTACTGATGTCAAACCTTGCACGCGTAGGACAGAACATGTT
ACTAGGTCATCTCTTGCGCACAGAAGAAGACCACGTGGGAAAATGTAAGA
GGTCACCTATGCGCACAGAACACCGCCGCACAGGACATGATCTATCTGTG
CCACAGAACAATGATTTATGGAGCACACTATTTCTCAGTGATCTGTGGAG
CACAGGTGACCTGTGCGCACAGAACAGCGGTTGGCAAAATGTCACAGGTC
ACCTGTGCGCCATAGAACATCAGATATTATGTGGCACAGGTGACCTGTGC
GCACAGAACACTGGTTGTCACATGTGACCTGTGCGCCACGCAACATCATG
ATCTGCGACTGTTCTAGTTCTAGGTGACCTGAAGGTGTTCTGATCTGTCC
TTTGTGTGAAACTTTGTGTGTTGGAACCAGCACACGGGAAGGAGGTCGCT
TGTTGAGGGCCCTCTCTTTCTTCTTGTGTGATGTCGTGAAATTGGAGGCG
TGGGCGCTTATCATGTTGAATTTAGTGGAAACGAAAATAAAATAGAGGTA
GAGACAAGACAAAAATAATACTGCAAGTACTGCCCGTACGACACGCCCCA
AACCACTGTCTTTTACCTGTTTTTTCGCCTCTAGCCCTCTTCTAGCTGCT
ATCACGTCTACCTCTCCTTCTACAACGCGTTCATGATGATACTGAACGTA
TTGTGTTCTGCATCATGGTGCAATTGTCGAAGGCGTGCGGGTCGTGCCGC
GTGCTTTTCCCTCAGCGTTTTTTCTTAGTTTTTAGGGTAGCGCGAGGTCT
GTGTGATGCAGTTTGTCTTTGTACGCACAAAGACGGGCTGGACATGACGC
CAATGTGATACTTAGGTATGATGGACATTGATGTGCGAAGGCGTGAAGCA
TAACGAAGTGTGGTCTGATGCCATCGCACACAGAGCGACTCAAATTACGA
GTACAAGTACTACACGGTAACTCAACAGGGGGGGGCGCACTGATGATGCA
GTGGGGAAACGGATGGGAAGGGTTAGTGCTATCACAGCAGTGTCAATCAA
CCTGGTGCACCTGGCAACTGAATAGGAGATTGTGCGGAATCCCCGGTAAT
AGACGAGCGAGCTATAGAAAAAACCATGCGATGTGTTTGGAGGGATGTTT
GGTTGTTTGGTTGATTTTCGGTTTGTTACTGAATTTGTTATGGTTAAGAT
TTTTTGGTGTCAGACGACAAATAAATAGAACAACAGAGAGCGGTGGGCGT
AACGCAAACGGCATGCCCAAGCAATCATCGCCGCCGGCGGCAGCGGATGT
GTTGCAGACATTGTTCCGCGAGCGAACATATAGATATCCTGTGACGGGTA
ATTCAGACAGACGCTGTTGTTCTGCAAGATCGCACCCGCGGAGCGTTCTG
TGTTTTTGTTTGTCGATTAGAGTTTGTGAATCAACTTAAAAAGTGCTGAT
ACATGCTACAGTACTTCGAGTATTTCCTTTCTATATTTTCGCTCAGCGCT
GAATTTCATGTAGTAATTTGATTTAATCACCTAATCTAGATGCTACTCCG
GAGTATATAAAATCGATTCGAGACATGTACTTTTTTCGAACATGTATGGT
CTTTCTAGGTCCTAGGGAAGGCGTTCACGATATTTGTTTTCGAAATTCCT
CGAAAACTGACGTAGTTTGGCTACGAAACCCTTAGAATAGCCGATTTCGT
TCTAATTTCAGTAATTGGGGGTTATTGTTGAAGTATTTTGCACTCACCGG
TATTTTCTCGCCCGTTTTTTTCAAGTTAGACGCTGAAATTTTGGACGCAT
GTACTATGAGTCACTACGCAACTTCGGACGGTGGGGATTTTTATTTTTTT
ATTTCACCGGATATCTGGGGTCCCAGTCGACCCAAACACCCCAGAAAGCA
CCCCAGAAACCTGACTCCAGATATCTGGTGAATGAAAAAATAAATACATG
AACAAATAAACCCCACCGTTCTAAGTTGCGCACAGTGACCCGTAGTACAT
GCATGCAAAAATTTCAGCGTCTAACTCGAAAAAACCGCGTGAGAAAATAC
CGGGCAGTAAATTTCGGGTTTCTTGCGTGAACCAGCCTGTAATCAAATCA
AACCCGTTTTCAGGTTGAATCACAACTACTCTATTGTTGACGCCGTACTC
GAAACGAAAGCAGTTGGGCCGCATGCCAGACCACATCTCATCATGAATTC
ATGCCAAAAGAGCGTGTTCTACGGCAAAGAATAGCCAAGTTATGGTCTTG
GACCCCGAGATCATTATCATAGCTTCATTTTGATCCCACTTGCGTGTCAC
ATACTTCGGTGCTGGCTGAGAAAAGGCCAAAATGCTCCATGCGGCGCAAT
TACATCTGTGTACGAGGCAGTCTTTTCTCTCGTTCTCTCTCTGTTGTCGA
GGCGAGAGGGTGCGTTTGGTGAACGACAAGCGTCTGCATGCAAACCCACG
AACACACGTCAAATAAGGGGCAGCACTGGGTAGCAGTGCACCGCATCCAG
ACCGTCGCGGAGAAAGACGCTCGCGGCGAGGTGGTCTTTACTGACTGTTG
TAATCGTTCGTGTGTGTGTGTGATGTGCCCCGGAAACCTGCGTCCAACCT
GACGAGTCCCAAAACAGACCTGCGTCCAACCTGACCAGTCGAACTCGGCC
CAGGAAGCACCAACTGAGCTAAAACTTTCTGGAGGCCTCTATCGTCTTAG
ACGGGCGATGGGCTCGCCGGTTGCGTCGCGCGCGATTGGCTCCACTTTTT
TCGTGGTGTGGAGCTACCTCATACATACGTACGTACATACATACATAAAT
AGAAATGTTTTACCGTTTCGAAATTTGATACCTCATCCATACGCCGGCCT
TAAACCCCTCGGCAGCGTTGTTCAAGTAATTTCTCGCCATCTCTTTGCAC
GATGATAAATCTTACGCTGACGGGCCTTACGCGGAGCAAGCCTCCGGGTG
GCGGCCCGTTTCAAGCGCAGCCCCCTGAAGTGCTCACATTTACGTGGTTT
AAGCAGAGGAATTGTTTTTTTTCTGCCGCTACCGCAAAATGTCGGGGTCC
CTTCTTACGGTAACATGTGCCGCCTCGTATCTTCCGCGTGTTGCTGCTGC
GCCGCCCTCGGTGAATGTTTCTTGGCGGATGGAACGTGAACCACCACATC
TGCGAACAACAGTCGCTCAAGATGAAGGTGGTGCACCCAGGTGAGACCGG
GTTCAGACGACGCCTACAATTGTTTCAATCTGCCGTATCGGCTGCCGGCG
ATACGGCGGCCACGAGCACACTAGTCTAGTCAATGTTGCAGCCTTGCACA
GAGGAAAGTAATGCGTCAGACCTTCGGATTGTCAGCTCGATTTTGCCGCG
CACGTTTTTCGTGAAAGTGAACGTTTCCCGAACAGTTGTACAGTATATTT
GAGGTAGTTGGACTTCTTCACAACCCACGCAAAGCAGGCGGTCGTGAGCT
ACGTAGAACCCACGAGAGTGGGTCATAGATGCGTCTGTCTCCTGTAAATC
GAAAGGCACACCGTCCCCAACTCCGCAGCCCCACAAACGCCTCTTATTCC
GCGATCGCGACGATATTCCTGGACACAGACTGGCTGAGCCGTTGCATCGA
GGAGGGGAAGCTACTCCCCGACGCTCCTTTCCGCGTGGTCCGCAGCCAAA
AGCTGGGGATGGATAAGTTTTTAGGCTCGTCTTCATCGCCGCCATCGTCG
TCGTCGTCGTCGTCGTCGTCATCTTCTGCGCCTGATTCTTCTACGTGCGA
TCGGGATGACGGTCGGTGCCGTAGCGCTCAGAAAGAGAACGAGACGATTG
GGTCGCCAAGACGTCACCTTTCGTCTCGACGAAAGGTACCGGCGGCGCCC
GGAGCCCGCGGCGAGCGGAGACACGGGGAGAAGATATTAGAGAGCCGGGA
TCGGAGAGGCGGGGCAGGGGGCAAGAGGGGTAGAGACGGGAGTGGTGTTG
CAAGCGCTGCCGGCGCCGCGCCCGATAAATCGAGCAATGGACTCGAAGGT
AGCAGGAGGAGCAAAAACGGTGCTTCGAACAACAGGAGCGTAAGCCGTCG
CACAAACAGCAGCACCATTAGCTGCAAGAGGGGGGCGAGCAGTAGCATCA
AGGACGGCAGCCACGCCGGTCGCAACGCTCCTCGCCTTGGAGGCTCCATG
CACGATCGGGTAGGCCTAGAAGCACCGGAGTCGAACGCACGGCTATACCG
GCCGGGGCACACCAAAAACATCACAACGCCAAGAAAAAGGTGCCGAGATA
CTGGTGAAATCCTCCTTCCTCCTTCCCGTACGATTACAGCATCGAGCTCT
TTGGTTCGAGGAGGAGAGAAGCGAGGATCTACGATTGCACGGAAGGAGAC
CGTGTCATCTCTGCCGATTGACGTTACTGTTTTATATTCGCCGAGCTGGA
CCATCAAGACGCACCAGACTACTGCGGGGTCGAACAATCGCGTTTTGTCG
GCGGGGGCGCAGCGCTTGGCGGGCGGCGAGAAGAGGCGAAGGCCAGCTGG
CGGTGGCGGTGGCAAGGGCCCAGCGCGTTTTGCACCTGTGACCAACTGAG
GTCGATTGCTGACGGCTAGGAATGGCCTTGCACGACAAAGACGCGCCGAG
ACCGTTTTGTGTTGCCAGTGCAGCCAGTCTCCGGTAGAAAAAATGCTGCT
GCTTGTACATTCCGGTAACTACAGGCGTGCCTAGGTCCTGGGGACGTCGA
TACTGACTGCTTCGTTTCCTTTCCTTAAGAGTAGCCTGCCTGGAGGTCAA
GGTTTTGACCATCTTGGTTCGGGCGATCGACGTTTACTATCCTTCTGCGG
AGACCCCGCTCCTCGGGGGAAAGGGGGAGCGACTTTCGAAATTATTTGAT
CATATGATACACGTTCATTGACCACGTATGCCCATCAGAAGGTAGTGAGA
TGAGACCAAGAGCAAATGGTTTACATCCCCGAGTTTTGCGCGGCTACTAC
CCTGAAAGTGGGGCTACCGGGTTGAGGCAGGAAACGTGTCAAATGGTAAA
TGGTTGTACGAGTAGCGCTGTGTGTTGTGTGTGGTCCTTCCTTTCAACGA
AGACCGTCGTGCCAACCAGTCGACCAACCAATACTTCAGTATACGTTTGT
CCCAGCGGGTCGACAAGGGTCGACAAACTTTGTTCGTGGTCTGCGTGTTG
CATTGCTCATTGCTGCTACTGTAGTGAGTGCGGTTGGTCCAAAGAGCGTA
TGATAATCGATTTCGTTTCGCTACTATGTGATCATTTGAGGTTGTCAGAA
AACGGGGTGTCGTGTAATGTGGCTGTGCGGGGGAGGCTTACTCGAAGCGT
TTGGGCAAGCCTACGGTTGGTTGTGGTGCTTCCCGCAGAAGGATACGGCG
GTGGCATGCACATGCGTGTACCGTGTGTACCGCATGTGCCACGTCGGGCT
GTTCAATTTACTGTCAATTTGATCCAAAGTTTAGTTTTCAAGAACTGTCG
AG
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Coding sequence (CDS) from alignment at P-littoralis_Contig179:193413..201664-

>mRNA_P-littoralis_Contig179.38.4 ID=mRNA_P-littoralis_Contig179.38.4|Name=mRNA_P-littoralis_Contig179.38.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1437bp|location=Sequence derived from alignment at P-littoralis_Contig179:193413..201664- (Pylaiella littoralis U1_48)
ATGGAAAGATCCCGAAATGATAAGGATCCCCCAGCGATACCATGGGCGGA
TTTCCGCGGCAAGTCCCCGAAACTTGGTCAAACACCACCATCAACCCTCC
TTTACAACCCTCAACCGCGCCCCCGATTCGTCGTCCCTCAAAGTAGCAGC
GGCGAACAGGTTAGCAAGAGAGGACCGCCGCTTGGTGGAAGGGGTGCATC
AGGCTACTGGCAATTCAGGACGTCCAAACTCTCAGAACAAGCGCCGAGAG
AAGTCTCGCAGCTTTTTCACGGTCTGAGCTTCTACTTCAACGGACGCACC
GGGGACAAGCAGACGATGCATCTGAAGGGCGCCGTCAGCAAGTACGGAGG
GCGAACCACGCCTTTCATGTCGATGAGGGGAGTCACACACGTCATTGCGG
AAAACCTGAGCGCCGTGAAGACTCATAAGGCCATGAAGTCGCTCAAGATG
AAGGTGGTGCACCCAGACTGGCTGAGCCGTTGCATCGAGGAGGGGAAGCT
ACTCCCCGACGCTCCTTTCCGCGTGGTCCGCAGCCAAAAGCTGGGGATGG
ATAAGTTTTTAGGCTCGTCTTCATCGCCGCCATCGTCGTCGTCGTCGTCG
TCGTCGTCATCTTCTGCGCCTGATTCTTCTACGTGCGATCGGGATGACGG
TCGGTGCCGTAGCGCTCAGAAAGAGAACGAGACGATTGGGTCGCCAAGAC
GTCACCTTTCGTCTCGACGAAAGGTACCGGCGGCGCCCGGAGCCCGCGGC
GAGCGGAGACACGGGGAGAAGATATTAGAGAGCCGGGATCGGAGAGGCGG
GGCAGGGGGCAAGAGGGGTAGAGACGGGAGTGGTGTTGCAAGCGCTGCCG
GCGCCGCGCCCGATAAATCGAGCAATGGACTCGAAGGTAGCAGGAGGAGC
AAAAACGGTGCTTCGAACAACAGGAGCGTAAGCCGTCGCACAAACAGCAG
CACCATTAGCTGCAAGAGGGGGGCGAGCAGTAGCATCAAGGACGGCAGCC
ACGCCGGTCGCAACGCTCCTCGCCTTGGAGGCTCCATGCACGATCGGGTA
GGCCTAGAAGCACCGGAGTCGAACGCACGGCTATACCGGCCGGGGCACAC
CAAAAACATCACAACGCCAAGAAAAAGGTGCCGAGATACTGGTGAAATCC
TCCTTCCTCCTTCCCGTACGATTACAGCATCGAGCTCTTTGGTTCGAGGA
GGAGAGAAGCGAGGATCTACGATTGCACGGAAGGAGACCGTGTCATCTCT
GCCGATTGACGTTACTGTTTTATATTCGCCGAGCTGGACCATCAAGACGC
ACCAGACTACTGCGGGGTCGAACAATCGCGTTTTGTCGGCGGGGGCGCAG
CGCTTGGCGGGCGGCGAGAAGAGGCGAAGGCCAGCTGGCGGTGGCGGTGG
CAAGGGCCCAGCGCGTTTTGCACCTGTGACCAACTGA
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