prot_P-littoralis_Contig179.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig179.11.1
Unique Nameprot_P-littoralis_Contig179.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length623
Homology
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BLAST of mRNA_P-littoralis_Contig179.11.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 691 bits (1782), Expect = 1.320e-241
Identity = 425/660 (64.39%), Postives = 471/660 (71.36%), Query Frame = 0 
Query:   10 WTKGDRKARRQLEKSLESDQNDHVTRFALVRLLA-KADPAGAEASHELLRGPGIEHNILADPTTRVAMLSSLGGAYLMLWRGRGGATSGNNSSCGGDGQGKDDTRCVAEIRLDVSSERTDLLHRAQGFLEEALTAPENINDPAIRAQV-------------------------------------------AFCKEVRGDCKDALALYASIISDSALSPGTSAVIFRTSVLLAYIGRFDECVRYLEFIEGQPPKGCSPLLVQALLYTCYVSMGLEMKASRRLVTLREAFNDEYTAGRMGAGFSRDEIPWNRLPGWFHMWRELGVNNLRAGDYYAGVQMFSQATLQREDAETMVCTGEMLWVLGDAKRALALCERAYAADPSHTGAKRRLSAWAPDKWKERIAKEEERREQVNEMRRLADLSEKKADAMLARRKRREKARVLRAWQRLHGKQESRRRRAXXXXXXXXXXXXXXXXXXXXXXXXX----DEASGSRXXXXYXGXXXXXXXXXSPRSDACSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAVEATEAGRANFLACFRAETARANMMRRRRERDGVVDGRKVAANMAPVELAVEAVHQAIRGGRMHGKGMMGARS-LTTHEMRALARFEWHRKTHEEKITRVVYSS 620
            WTKGD +A++QLEKSL SDQ+DHVTRFALVRLLA KA+PA AE   ELLRGPG+E  +LADP TRVAMLSSLGGAYLMLWR RG  TS +  S  G GQGKD TR V EIRLDVSSERTDLLHRAQ FLEEAL +PEN+NDPAIRAQV                                           AFCKE RGD K+AL LYASIISDSALSPG SAVIFRTSVLLAY+GR DECVRYLEFIEGQPPKGCS LLVQALLYTCYVS+GLE+K SRRL+TLREA+NDEYTAGRMG GFSRDEIPW+RLPGWF+MWRELGV ++RAG+YYAG+QMFSQATLQR+D ETMVCT EMLWVLG+ KRALALCERAYAADP H GA+RRLS WAP KWKERI KEEERRE + EMRRLADLS+KKADAMLARR+RREKAR LRAW+RLH K + RR  +         XXXXXXXXXXXXX        ++S SR     X XXXXXXXXX         XX                                PSA EA EAGR+NF ACFRAET RA     RR+R+      ++  +MA V++A EA+H+A+RGG     G  GARS   THEMRALARF+ HRKTHE KIT+VVY S
Sbjct:    5 WTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAE---ELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKD-TREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAM----RRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWK-TGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVYGS 655
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L576_9PHAE1.320e-24164.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 368..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..505
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 12..422
e-value: 2.5E-11
score: 45.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 278..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig179contigP-littoralis_Contig179:45006..50620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig179.11.1mRNA_P-littoralis_Contig179.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig179 45006..50620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig179.11.1 ID=prot_P-littoralis_Contig179.11.1|Name=mRNA_P-littoralis_Contig179.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=623bp
MQSVGSSSGWTKGDRKARRQLEKSLESDQNDHVTRFALVRLLAKADPAGA
EASHELLRGPGIEHNILADPTTRVAMLSSLGGAYLMLWRGRGGATSGNNS
SCGGDGQGKDDTRCVAEIRLDVSSERTDLLHRAQGFLEEALTAPENINDP
AIRAQVAFCKEVRGDCKDALALYASIISDSALSPGTSAVIFRTSVLLAYI
GRFDECVRYLEFIEGQPPKGCSPLLVQALLYTCYVSMGLEMKASRRLVTL
REAFNDEYTAGRMGAGFSRDEIPWNRLPGWFHMWRELGVNNLRAGDYYAG
VQMFSQATLQREDAETMVCTGEMLWVLGDAKRALALCERAYAADPSHTGA
KRRLSAWAPDKWKERIAKEEERREQVNEMRRLADLSEKKADAMLARRKRR
EKARVLRAWQRLHGKQESRRRRAQSEQAEGTGGGRSRTASSRRNGSGSDE
ASGSRSSSSYSGSSSSSGSAGSPRSDACSSVSSRSSAFTSSSSSKEGRGA
SSSSSSVPPPSPPVPSAVEATEAGRANFLACFRAETARANMMRRRRERDG
VVDGRKVAANMAPVELAVEAVHQAIRGGRMHGKGMMGARSLTTHEMRALA
RFEWHRKTHEEKITRVVYSSVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf