prot_P-littoralis_Contig178.97.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig178.97.1
Unique Nameprot_P-littoralis_Contig178.97.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length174
Homology
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BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 9.560e-11
Identity = 62/160 (38.75%), Postives = 76/160 (47.50%), Query Frame = 0 
Query:    1 MLKDGNVSRPTPFQPAKWGIFSEKGSTAVYRGSCHGPCFGGGHDFHVNLT---PPHHTLTVRKSSYDIEAPILM--LNGRSVVEIETFTVSSTAATAL----------PLPAEPACSTTTAIADPTRFRSTPPLEQHAN-DIDTFGKAIAGSLMEERMAL 144
            MLKD ++  P  FQP KWG     G   V  G+  GP FG   D  VN     P   TL  +  SYD+ +      LNG+++ EIE F V S AAT            P     A ST+          ST    + AN D +TFG AIAG+LMEER+AL
Sbjct:  253 MLKDSDMGGPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRT-DLVVNFNNYFPV--TLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTS----------STNTASREANSDAETFGNAIAGALMEERIAL 399
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2H5_ECTSI9.560e-1138.75TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:444273..444794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.97.1mRNA_P-littoralis_Contig178.97.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig178 444273..445165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig178.97.1 ID=prot_P-littoralis_Contig178.97.1|Name=mRNA_P-littoralis_Contig178.97.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp
MLKDGNVSRPTPFQPAKWGIFSEKGSTAVYRGSCHGPCFGGGHDFHVNLT
PPHHTLTVRKSSYDIEAPILMLNGRSVVEIETFTVSSTAATALPLPAEPA
CSTTTAIADPTRFRSTPPLEQHANDIDTFGKAIAGSLMEERMALCLKPKS
SLLQQVTRSQPPPTPWPPCTARM*
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