prot_P-littoralis_Contig178.91.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig178.91.2
Unique Nameprot_P-littoralis_Contig178.91.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length585
Homology
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: D7FSG2_ECTSI (WD-repeat protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG2_ECTSI)

HSP 1 Score: 771 bits (1992), Expect = 2.160e-275
Identity = 433/592 (73.14%), Postives = 469/592 (79.22%), Query Frame = 0
Query:    1 MALFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXX--SRRRRPKELREVGRTPRVPLSQSGNGS---SYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXX-HRV----GVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWSSDDEGGGDGVEGRGAGLASSSSAGFDDVEAAVAAMERGSGGDGGSSSGGISRSXXXXXXXXXXXGRRRGGFIPRILTQDQRA 582
            MALFRALERRRAG+    STAD+LR SR+S+LDL+++VEIKSPH+GP+TWLDVDSAEERYLLTGGADCTVA+FDLDGAGE K PS+ SG  N    R    AA    +RRRRPK LREVGRTPRVPLSQS       SYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVV+EFDFKDKV++A+MS   GQHHLIAVGS SPQARLCDIRSGAFAH+LSG HSEAV ACAWSP SEFLLATGSADQT RLWDIRRSGASACLISLDQHQE XXXXXXXXXX H V    GV G  D G++D  G G        RGYL+H+KLAPHASRASKFARAHAGPVNSLCF+P+GLHL+TAGTDNRLRLW+V+TGRNTMTNYL+T NKRRRPFGMAV +PAG RSETVFFPNDKSGDVLVFPLHT DGRPKG LR HFDPVQCCAYRPRTQE+VTCGADGLVLLWS+A PPW SRASYLP PL  GA GTKRRLG  E  +DQDMWSSDDEGG DG         S +S  FD +E    +      G  GS  GG S             G   G F+PRILTQ +RA
Sbjct:    1 MALFRALERRRAGVLRQRSTADKLRTSRVSQLDLDINVEIKSPHHGPVTWLDVDSAEERYLLTGGADCTVAVFDLDGAGE-KRPSLASGDDNNSGPRRHGPAAETVAARRRRPKVLREVGRTPRVPLSQSSGXXXXXSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTTGQHHLIAVGSDSPQARLCDIRSGAFAHALSG-HSEAVSACAWSPRSEFLLATGSADQTVRLWDIRRSGASACLISLDQHQEDXXXXXXXXXXXHTVRCGSGVGGSAD-GSDDGRGSGVRGSGKRKRGYLKHIKLAPHASRASKFARAHAGPVNSLCFAPEGLHLLTAGTDNRLRLWEVETGRNTMTNYLQTKNKRRRPFGMAVGRPAGRRSETVFFPNDKSGDVLVFPLHTPDGRPKGKLRGHFDPVQCCAYRPRTQEVVTCGADGLVLLWSAAGPPWASRASYLPPPLAAGAGGTKRRLG--ESTEDQDMWSSDDEGG-DG---------SRTSPAFDSLEGVGNSTISSGTGRSGSRRGGRS------------PGGSGGAFVPRILTQPRRA 565          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A835YTD9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD9_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.630e-80
Identity = 176/450 (39.11%), Postives = 214/450 (47.56%), Query Frame = 0
Query:   13 GLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAA 462
            G T P  +  Q R     RL+LN DVE++SPH  P++WLDVD +E RYLLT  AD  +ALFDLD  G              V      A      RRR K L    RTP  P +     ++  GH ++ S VQWYPVD GLF+S  MDGVVK WDTNT  VV++F+    VFAAA+  +                              S GHS  VWA AWSP  E+LLA+G+ D   RLWDIRRSGASACL+ LDQ+Q                                                                                TAG   RL LW+  +G NT+T+YL T N+R +PF MA      P  + VFFP + +GDVL FP++T DGR +  LR HF+ VQ CAYR  TQEL+T GADGLVLLWS  A
Sbjct:   26 GATRPRQSQQQHRR----RLELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKG--------------VIT---DADGGGQLRRRIKRLSLAPRTP--PAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPS------------------------------SAGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ--------------------------------------------------------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMA------PAEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPA 336          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A1Y1IA25_KLENI (Putative WD-40 repeat family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IA25_KLENI)

HSP 1 Score: 260 bits (665), Expect = 7.670e-77
Identity = 176/463 (38.01%), Postives = 232/463 (50.11%), Query Frame = 0
Query:    3 LFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGN--EDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAP 463
            +++ L+ R+ G   P  TA ++  SRL  LDL+   EI S H   +T L VD+ E+RYLL+G +D ++A+ D       + P+        V  R                L ++ +             + G H+++VS V WYP+DTGLFVSG+ D  VK WDTNTL V + F    KVFA AMS  A  H LIAVGSG  + RLCD+ SG FAHSL+G H +AVWA  WS +SEF+L TG  D   R WDIRR+G   C   LDQH+                     D  N  +   G G     +  R  L H  +A    R S    AH  PV SL  +PDG +L + G D+RLRLW ++TG NT+ NY  T  K  R   +AV     P S  V+ P   SG V+        G P   LR HF+ V CC ++   QE+ + G D  +L+W   AP
Sbjct:   37 MWKHLQDRQTGSEKPQVTAARIAKSRLLALDLSTSKEISSGHRSGVTSLQVDNTEQRYLLSGASDGSLAVHDT------QVPTKYEQDGTAVHER----------------LFKIDKR------------TEGAHQYAVSSVSWYPIDTGLFVSGSFDDTVKCWDTNTLQVEMTFSLPAKVFAVAMSPVAVTHTLIAVGSGDTRVRLCDVSSGGFAHSLAG-HRDAVWAVTWSLSSEFVLMTGGCDGAIRFWDIRRAG---CFKVLDQHKTQMGRRPPPRPQDTR-----TDPPNALQQREGRGPKRRGAPDRPQLLHPGMASALDRTS----AHDAPVTSLQGTPDGQYLFSTGADSRLRLWDIETGNNTLVNYRTTRGKANRGTQIAV----SPDSSHVYQP---SGSVIQA-FDVWSGEPHATLRGHFEGVNCCTFQAHDQEMYSGGNDRQILVWEPPAP 444          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: ERCC8_MOUSE (DNA excision repair protein ERCC-8 n=31 Tax=Tetrapoda TaxID=32523 RepID=ERCC8_MOUSE)

HSP 1 Score: 243 bits (621), Expect = 3.000e-71
Identity = 167/501 (33.33%), Postives = 237/501 (47.31%), Query Frame = 0
Query:    7 LERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWSSDDEGG 506
            L  R++GL  P          R+  L+LN D +++  H   +  LD++  E RY+L+GG+D  V L+DL+ A            + +  Y  ++  +             VGR+ P V             H++SV  VQWYP DTG+F S + D  +KVWDTNTL     F+F++ V++  MS AA +H L+AVG+  P+ +LCD++SG+ +H L G H + + A +WSP  +++LAT SAD   +LWD+RR  AS CL++LDQH                                                     +  A     AH G VN LCF+ DGLHL+T GTDNR+RLW   +G NT+ NY K  N  R+    AV    G  SE VF P+  +  + V+ +H+  G     L+ H+  V CC ++P  QEL +   D  +L W    PP     SY P P        K +L         D WSS DE G
Sbjct:    5 LSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGVVVLYDLENA------------SRQPHYTCKAVCS-------------VGRSHPDV-------------HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRHDYILATASADSRVKLWDVRR--ASGCLLTLDQHN-------------------------------------------------GKKSQAAESANTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGDNTLVNYGKVCNDSRKGLQFAV--SCGCSSEFVFVPHGST--IAVYAVHS--GERLAMLKGHYKSVDCCVFQPNFQELYSGSRDCNILAW---VPP-----SYEPVPDDDDEAPAKSQLNPAF----ADAWSSSDEDG 397          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: UPI00074FF47C (DNA excision repair protein ERCC-8 isoform X1 n=2 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FF47C)

HSP 1 Score: 242 bits (617), Expect = 1.130e-70
Identity = 172/499 (34.47%), Postives = 239/499 (47.90%), Query Frame = 0
Query:   10 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFAR--AHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWSSDDEG 505
            R+AGL  P          R+  L+LN D +++  H   I+ LD++  E RY+L+GG+D  + L+DL+           SGK     Y  ++  +             VGR+ P V             H+ SV  VQWYP DTG+F S + D  +KVWDTNTL    EF+F+  V++  MS  A +H LIAVG+ SP+ +LCD++SG+ +H L G H + V A +WSP  E++LAT SAD   +LWD+RR  ASACLI+LDQH                                                      S+AS  A   AH G VN LCF+ DGLHL+T GTD+R+RLW   +G NT+ NY K  N  R+    AV     P  E VF P   S  + ++ +++ D      LR H++ V CC ++P  QEL + G D  +L+W  +           P P     K       QC +   +D WSS  +G
Sbjct:    8 RQAGLDDPLRLRRAESTRRVLSLELNKDKDVERIHGSGISTLDIEPVEGRYMLSGGSDGVIVLYDLENC---------SGKP---CYTCKAVCS-------------VGRSHPDV-------------HKFSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQPADEFNFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSHILQG-HKQEVLAVSWSPRYEYILATASADSKVKLWDVRR--ASACLITLDQHNG--------------------------------------------------EKSKASSEAANTAHNGRVNGLCFTSDGLHLLTVGTDDRMRLWNSSSGENTLVNYGKVCNDSRKGLKFAVSHGCSP--EFVFVPY--SNTIAIYTIYSGDLITT--LRGHYNSVDCCVFQPHFQELYSSGRDSNILVWVPSVRE--------PEPDDASEK-------QCLNPAYEDAWSSSSDG 394          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A6I8NHV3_ORNAN (ERCC excision repair 8, CSA ubiquitin ligase complex subunit n=5 Tax=Monotremata TaxID=9255 RepID=A0A6I8NHV3_ORNAN)

HSP 1 Score: 238 bits (606), Expect = 1.430e-68
Identity = 158/450 (35.11%), Postives = 226/450 (50.22%), Query Frame = 0
Query:   10 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLW 458
            RR+GL  P        A R+  L+LN D +++  H   +  LD++  E RY+L+GG+D  + L+DL+     KP           +Y  ++  +             VGR+ P V             H+ SV  VQWYP DTG+F S + D  +K+WDTNTL    EF F+  V++  MS  A +H LIAVG+ SP+ +LCD++SG+ +H L G H + + A +WSP SE++LATGSAD   +LWD+RR  AS CL +LDQH                        G +  G                       +S A+    AH G VN LCF+ DGLHL+T GTD+R+RLW    G+NT+ NY K  N+ R+    A+ +   P  E VF P   +  + V+ +++  G     LR H++ V CC ++P  QEL +   D  VL W
Sbjct:   46 RRSGLDQPLRLRRAESARRVLSLELNKDRDVERVHSSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENF-TRKP-----------YYTCKAVCS-------------VGRSHPAV-------------HKFSVETVQWYPHDTGIFTSSSFDKTLKIWDTNTLQPADEFHFEGTVYSHHMSPIATKHCLIAVGTKSPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRSEYILATGSADSRVKLWDVRR--ASGCLTTLDQHN-----------------------GEKSKG-----------------------SSEAAN--TAHNGRVNGLCFTRDGLHLLTVGTDDRMRLWNSSAGKNTLVNYGKVCNESRKGLKFAISQGCSP--EFVFVPYGST--IAVYTVYS--GELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNVLAW 400          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A2K1XNW7_POPTR (Uncharacterized protein n=14 Tax=Saliceae TaxID=238069 RepID=A0A2K1XNW7_POPTR)

HSP 1 Score: 238 bits (607), Expect = 1.520e-68
Identity = 163/479 (34.03%), Postives = 235/479 (49.06%), Query Frame = 0
Query:    3 LFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVG-------------VFGGRDLGNEDVGGG-GXXXXXSG---TRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFP---NDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSA 461
            ++R +  R AG T P S  +++ +SR+S L L+   ++ SPH G I  L VD  E RYLL+G +D + ++FD+  A +        G    +  + +S                          Q  NG     H+ ++S   WYP+DTGLFV+G+ D  +KVWDTN+  +V+ F    KV+  AMS  A  H LIA G+   Q RLCDI SGAFAH+LSG H + V    WS +SE++L TG  D   R WDIRR+G   C + LDQ Q              V              + G   +  +  GGG G      G    +GYL+  +L P    +   A AH G V  L  + DG++L++AG+D+R+RLW V++GRNT+ N+     +  +P  +A  +     S  VF P   + K+ DV     + T        R H++ V CC +  + QEL T G D  +L+WS A
Sbjct:    1 MWREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLLSGASDASASVFDIQHATD-----FEGGGEGALIAKHKSLITIDK--------------------QHQNG-----HKFAISSAIWYPIDTGLFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSG-HRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAG---CFLVLDQSQSQLGRRPPVLARSAVSKVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQ-RLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQTSKPIQLATAQD----SNLVFVPCMTSVKAFDVWSGKTYVT-------FRGHYEHVNCCWFSSQDQELYTGGNDRQILVWSPA 433          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A7N0ZUG6_KALFE (Uncharacterized protein n=4 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ZUG6_KALFE)

HSP 1 Score: 238 bits (606), Expect = 2.240e-68
Identity = 169/501 (33.73%), Postives = 239/501 (47.70%), Query Frame = 0
Query:   10 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQ-EXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTR---------GYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWS 500
            R +G   P S + +L+++R++ + L+   E  SPH G I  L VD AE RYLL+G AD +VA+FD+ GA + +   + + K   +F   +                         L +SG       H+++VS   WYP+DTGLF++G+ D  + VWDTNT  VV+ F    KV+  AMS  A  H LIA G+   Q RLCDI SGAF H LSG H + V +  WS +SE++L TG  D   R WDIRR+G+   L   DQ Q +               V   R   +            + ++            R  +L P        A AH G V  L  + DG++L++AG+D+RLRLW V++GRNT+ NY     +  +P  +AV +     S  VF P   S     F      G      R H++ V CC +    QEL T G D  +L+WS   PP  + A  +   + GG +   RR      ++DQD WS
Sbjct:    8 RESGRLRPNSFSSRLKSTRVASIQLSNHKEFVSPHKGAINCLQVDLAEGRYLLSGAADASVAVFDVQGATDYEGGGLIA-KHKSIFTVDK-------------------------LHESG-------HQYAVSSAIWYPIDTGLFITGSYDNFINVWDTNTTQVVMNFKMPGKVYRTAMSPLANSHMLIAAGTEDVQVRLCDISSGAFTHMLSG-HRDGVMSIEWSMSSEWVLMTGGCDGAIRFWDIRRAGSFRVL---DQSQSQLGRRTPILRRCESEKVLTSRSSPSSHTATNKSRIPLTDSKQSPSRNQRXXXXRKQRLHPGLLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGRNTLVNYETARLQGTKPMQLAVTQD----SALVFVPCMSSVKAFDF----WSGSISKTFRGHYESVNCCCFNFHDQELYTGGNDRQILVWS---PPRFTSADQMDTQVEGGGR---RRY----PLEDQDNWS 453          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: F6Y8S9_MONDO (Uncharacterized protein n=11 Tax=Metatheria TaxID=9263 RepID=F6Y8S9_MONDO)

HSP 1 Score: 235 bits (599), Expect = 4.960e-68
Identity = 157/458 (34.28%), Postives = 222/458 (48.47%), Query Frame = 0
Query:    7 LERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFAR--AHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSA 461
            LE R+ GL  PG         R+ +L+LN D +++  H   +  LD++  E RY+L+GG+D  +AL+DL+              + +V Y  +S  +             VGR  P V             H++SV  VQWYP DTG+F S + D  +K+WDTNTL     F F+  V++  MS  A +H LIAVG+  P+ +LCD++SG+ +H L G H + + A +WSP  E++LAT SAD   +LWDIRR  AS CLI+LDQH                                                      S+AS  A   AH G VN LCF+ DGLHL+T GTD+R+RLW    G NT+ NY K  N+ R+     +     P  E VF P   +  + V+ +++  G     LR H++ V CC ++P  QEL +   D  +L W  A
Sbjct:    5 LEARQVGLDDPGRLRRAEATRRVLKLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGIIALYDLENF------------SRKVHYTCKSICS-------------VGRNHPDV-------------HKYSVETVQWYPHDTGMFTSSSFDKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKGPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRYEYILATASADSKVKLWDIRR--ASGCLITLDQHNG--------------------------------------------------EKSKASSEAANTAHNGRVNGLCFTRDGLHLLTIGTDDRMRLWNSSNGENTLVNYGKVCNESRKGLKFTISHGCSP--EFVFVPYGSA--IAVYTVYS--GELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNILAWVPA 365          
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A6J0SX53_9SAUR (DNA excision repair protein ERCC-8 isoform X1 n=3 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SX53_9SAUR)

HSP 1 Score: 235 bits (599), Expect = 5.390e-68
Identity = 159/458 (34.72%), Postives = 218/458 (47.60%), Query Frame = 0
Query:   10 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFA--RAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPR------SETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLW 458
            R+ GL  P          R+  L+LN D +I+  H   I  LD++  E RY+L+GG+D  + L+DL+  G  KP            Y  ++  +             VGR+ P V             H+ SV  VQWYP DTG+F S + D  +K+WDTNTL  V  F F+  V++  MS  A +H LIAVG+ +P+ +LCD++SG+ +H L G H + V A +WSP  E++LAT SAD   +LWD+RR  ASACL++LDQH                                                      S+AS  A   AH G VN LCF+ DGLHL+T GTD+R+RLW   +G NT+ NY K  N+ R+    AV     P       S T+      SGD++              LR H+  V CC ++P  QEL + G DG +L W
Sbjct:    8 RQTGLDDPLRLRRAESTRRVLSLELNKDRDIERIHGSGINTLDIEPVESRYMLSGGSDGVIVLYDLENLG-GKP-----------CYTCKAVCS-------------VGRSHPDV-------------HKFSVETVQWYPHDTGMFTSSSFDKTLKIWDTNTLQSVEVFTFEGTVYSHHMSPIATRHCLIAVGTRNPKVQLCDLKSGSCSHILQG-HKQEVLAVSWSPRYEYILATASADSRVKLWDVRR--ASACLLTLDQHNG--------------------------------------------------EKSKASSEAVNTAHNGRVNGLCFTNDGLHLLTIGTDDRMRLWNSSSGENTLVNYGKVCNESRKGVKFAVSHGCSPEFAFVPYSSTIALYTVYSGDLITV------------LRGHYSSVDCCVFQPNFQELYSSGRDGNILAW 362          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSG2_ECTSI2.160e-27573.14WD-repeat protein, putative n=2 Tax=Ectocarpus Tax... [more]
A0A835YTD9_9STRA1.630e-8039.11WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1Y1IA25_KLENI7.670e-7738.01Putative WD-40 repeat family protein n=1 Tax=Klebs... [more]
ERCC8_MOUSE3.000e-7133.33DNA excision repair protein ERCC-8 n=31 Tax=Tetrap... [more]
UPI00074FF47C1.130e-7034.47DNA excision repair protein ERCC-8 isoform X1 n=2 ... [more]
A0A6I8NHV3_ORNAN1.430e-6835.11ERCC excision repair 8, CSA ubiquitin ligase compl... [more]
A0A2K1XNW7_POPTR1.520e-6834.03Uncharacterized protein n=14 Tax=Saliceae TaxID=23... [more]
A0A7N0ZUG6_KALFE2.240e-6833.73Uncharacterized protein n=4 Tax=Kalanchoe fedtsche... [more]
F6Y8S9_MONDO4.960e-6834.28Uncharacterized protein n=11 Tax=Metatheria TaxID=... [more]
A0A6J0SX53_9SAUR5.390e-6834.72DNA excision repair protein ERCC-8 isoform X1 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 576..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..584
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 134..170
score: 10.311051
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 427..459
score: 8.597424
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 222..257
score: 10.469233
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 332..369
score: 12.235586
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 351..365
score: 30.2
coord: 154..168
score: 34.66
coord: 242..256
score: 43.92
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 324..364
e-value: 3.3E-7
score: 40.0
coord: 214..255
e-value: 5.8E-9
score: 45.8
coord: 420..459
e-value: 2.2E-5
score: 33.9
coord: 33..74
e-value: 0.21
score: 20.7
coord: 127..167
e-value: 1.4E-4
score: 31.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 333..363
e-value: 8.1E-6
score: 26.5
coord: 132..167
e-value: 0.017
score: 16.0
coord: 422..459
e-value: 9.5E-4
score: 19.9
coord: 219..255
e-value: 1.6E-6
score: 28.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 222..257
score: 12.580379
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 332..373
score: 16.189545
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 134..170
score: 12.379869
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 427..459
score: 10.207686
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..461
e-value: 1.2E-96
score: 325.8
IPR042238DNA excision repair protein Rad28/ERCC8/Ckn1/ATCSA-1PANTHERPTHR46202DNA EXCISION REPAIR PROTEIN ERCC-8coord: 5..500
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 242..256
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 42..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:421684..433915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.91.2mRNA_P-littoralis_Contig178.91.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig178 420898..433915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig178.91.2 ID=prot_P-littoralis_Contig178.91.2|Name=mRNA_P-littoralis_Contig178.91.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=585bp
MALFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITW
LDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRS
AAAAASRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVD
TGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAV
GSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQT
ARLWDIRRSGASACLISLDQHQEEEEEGDEEEDDHRVGVFGGRDLGNEDV
GGGGGASGGSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLH
LVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSET
VFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCG
ADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWS
SDDEGGGDGVEGRGAGLASSSSAGFDDVEAAVAAMERGSGGDGGSSSGGI
SRSVGGDGGTIRGGGRRRGGFIPRILTQDQRARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR042238Rad28/ERCC8/Ckn1/ATCSA-1
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf