mRNA_P-littoralis_Contig178.91.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: D7FSG2_ECTSI (WD-repeat protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG2_ECTSI) HSP 1 Score: 771 bits (1990), Expect = 6.280e-271 Identity = 433/592 (73.14%), Postives = 469/592 (79.22%), Query Frame = 1
Query: 1 MALFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXX--SRRRRPKELREVGRTPRVPLSQSGNGS---SYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXX-HRV----GVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWSSDDEGGGDGVEGRGAGLASSSSAGFDDVEAAVAAMERGSGGDGGSSSGGISRSXXXXXXXXXXXGRRRGGFIPRILTQDQRA 1746
MALFRALERRRAG+ STAD+LR SR+S+LDL+++VEIKSPH+GP+TWLDVDSAEERYLLTGGADCTVA+FDLDGAGE K PS+ SG N R AA +RRRRPK LREVGRTPRVPLSQS SYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVV+EFDFKDKV++A+MS GQHHLIAVGS SPQARLCDIRSGAFAH+LSG HSEAV ACAWSP SEFLLATGSADQT RLWDIRRSGASACLISLDQHQE XXXXXXXXXX H V GV G D G++D G G RGYL+H+KLAPHASRASKFARAHAGPVNSLCF+P+GLHL+TAGTDNRLRLW+V+TGRNTMTNYL+T NKRRRPFGMAV +PAG RSETVFFPNDKSGDVLVFPLHT DGRPKG LR HFDPVQCCAYRPRTQE+VTCGADGLVLLWS+A PPW SRASYLP PL GA GTKRRLG E +DQDMWSSDDEGG DG S +S FD +E + G GS GG S G G F+PRILTQ +RA
Sbjct: 1 MALFRALERRRAGVLRQRSTADKLRTSRVSQLDLDINVEIKSPHHGPVTWLDVDSAEERYLLTGGADCTVAVFDLDGAGE-KRPSLASGDDNNSGPRRHGPAAETVAARRRRPKVLREVGRTPRVPLSQSSGXXXXXSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTTGQHHLIAVGSDSPQARLCDIRSGAFAHALSG-HSEAVSACAWSPRSEFLLATGSADQTVRLWDIRRSGASACLISLDQHQEDXXXXXXXXXXXHTVRCGSGVGGSAD-GSDDGRGSGVRGSGKRKRGYLKHIKLAPHASRASKFARAHAGPVNSLCFAPEGLHLLTAGTDNRLRLWEVETGRNTMTNYLQTKNKRRRPFGMAVGRPAGRRSETVFFPNDKSGDVLVFPLHTPDGRPKGKLRGHFDPVQCCAYRPRTQEVVTCGADGLVLLWSAAGPPWASRASYLPPPLAAGAGGTKRRLG--ESTEDQDMWSSDDEGG-DG---------SRTSPAFDSLEGVGNSTISSGTGRSGSRRGGRS------------PGGSGGAFVPRILTQPRRA 565
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A835YTD9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD9_9STRA) HSP 1 Score: 267 bits (683), Expect = 4.370e-78 Identity = 176/450 (39.11%), Postives = 214/450 (47.56%), Query Frame = 1
Query: 37 GLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAA 1386
G T P + Q R RL+LN DVE++SPH P++WLDVD +E RYLLT AD +ALFDLD G V A RRR K L RTP P + ++ GH ++ S VQWYPVD GLF+S MDGVVK WDTNT VV++F+ VFAAA+ + S GHS VWA AWSP E+LLA+G+ D RLWDIRRSGASACL+ LDQ+Q TAG RL LW+ +G NT+T+YL T N+R +PF MA P + VFFP + +GDVL FP++T DGR + LR HF+ VQ CAYR TQEL+T GADGLVLLWS A
Sbjct: 26 GATRPRQSQQQHRR----RLELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDSKG--------------VIT---DADGGGQLRRRIKRLSLAPRTP--PAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPS------------------------------SAGHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ--------------------------------------------------------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMA------PAEDLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWSCPA 336
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A1Y1IA25_KLENI (Putative WD-40 repeat family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IA25_KLENI) HSP 1 Score: 260 bits (665), Expect = 1.750e-74 Identity = 176/463 (38.01%), Postives = 232/463 (50.11%), Query Frame = 1
Query: 7 LFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGN--EDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAP 1389
+++ L+ R+ G P TA ++ SRL LDL+ EI S H +T L VD+ E+RYLL+G +D ++A+ D + P+ V R L ++ + + G H+++VS V WYP+DTGLFVSG+ D VK WDTNTL V + F KVFA AMS A H LIAVGSG + RLCD+ SG FAHSL+G H +AVWA WS +SEF+L TG D R WDIRR+G C LDQH+ D N + G G + R L H +A R S AH PV SL +PDG +L + G D+RLRLW ++TG NT+ NY T K R +AV P S V+ P SG V+ G P LR HF+ V CC ++ QE+ + G D +L+W AP
Sbjct: 37 MWKHLQDRQTGSEKPQVTAARIAKSRLLALDLSTSKEISSGHRSGVTSLQVDNTEQRYLLSGASDGSLAVHDT------QVPTKYEQDGTAVHER----------------LFKIDKR------------TEGAHQYAVSSVSWYPIDTGLFVSGSFDDTVKCWDTNTLQVEMTFSLPAKVFAVAMSPVAVTHTLIAVGSGDTRVRLCDVSSGGFAHSLAG-HRDAVWAVTWSLSSEFVLMTGGCDGAIRFWDIRRAG---CFKVLDQHKTQMGRRPPPRPQDTR-----TDPPNALQQREGRGPKRRGAPDRPQLLHPGMASALDRTS----AHDAPVTSLQGTPDGQYLFSTGADSRLRLWDIETGNNTLVNYRTTRGKANRGTQIAV----SPDSSHVYQP---SGSVIQA-FDVWSGEPHATLRGHFEGVNCCTFQAHDQEMYSGGNDRQILVWEPPAP 444
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: ERCC8_MOUSE (DNA excision repair protein ERCC-8 n=31 Tax=Tetrapoda TaxID=32523 RepID=ERCC8_MOUSE) HSP 1 Score: 243 bits (621), Expect = 4.500e-69 Identity = 167/501 (33.33%), Postives = 237/501 (47.31%), Query Frame = 1
Query: 19 LERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWSSDDEGG 1518
L R++GL P R+ L+LN D +++ H + LD++ E RY+L+GG+D V L+DL+ A + + Y ++ + VGR+ P V H++SV VQWYP DTG+F S + D +KVWDTNTL F+F++ V++ MS AA +H L+AVG+ P+ +LCD++SG+ +H L G H + + A +WSP +++LAT SAD +LWD+RR AS CL++LDQH + A AH G VN LCF+ DGLHL+T GTDNR+RLW +G NT+ NY K N R+ AV G SE VF P+ + + V+ +H+ G L+ H+ V CC ++P QEL + D +L W PP SY P P K +L D WSS DE G
Sbjct: 5 LSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGVVVLYDLENA------------SRQPHYTCKAVCS-------------VGRSHPDV-------------HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRHDYILATASADSRVKLWDVRR--ASGCLLTLDQHN-------------------------------------------------GKKSQAAESANTAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGDNTLVNYGKVCNDSRKGLQFAV--SCGCSSEFVFVPHGST--IAVYAVHS--GERLAMLKGHYKSVDCCVFQPNFQELYSGSRDCNILAW---VPP-----SYEPVPDDDDEAPAKSQLNPAF----ADAWSSSDEDG 397
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: UPI00074FF47C (DNA excision repair protein ERCC-8 isoform X1 n=2 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FF47C) HSP 1 Score: 242 bits (617), Expect = 1.630e-68 Identity = 172/499 (34.47%), Postives = 239/499 (47.90%), Query Frame = 1
Query: 28 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFAR--AHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWSSDDEG 1515
R+AGL P R+ L+LN D +++ H I+ LD++ E RY+L+GG+D + L+DL+ SGK Y ++ + VGR+ P V H+ SV VQWYP DTG+F S + D +KVWDTNTL EF+F+ V++ MS A +H LIAVG+ SP+ +LCD++SG+ +H L G H + V A +WSP E++LAT SAD +LWD+RR ASACLI+LDQH S+AS A AH G VN LCF+ DGLHL+T GTD+R+RLW +G NT+ NY K N R+ AV P E VF P S + ++ +++ D LR H++ V CC ++P QEL + G D +L+W + P P K QC + +D WSS +G
Sbjct: 8 RQAGLDDPLRLRRAESTRRVLSLELNKDKDVERIHGSGISTLDIEPVEGRYMLSGGSDGVIVLYDLENC---------SGKP---CYTCKAVCS-------------VGRSHPDV-------------HKFSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQPADEFNFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSHILQG-HKQEVLAVSWSPRYEYILATASADSKVKLWDVRR--ASACLITLDQHNG--------------------------------------------------EKSKASSEAANTAHNGRVNGLCFTSDGLHLLTVGTDDRMRLWNSSSGENTLVNYGKVCNDSRKGLKFAVSHGCSP--EFVFVPY--SNTIAIYTIYSGDLITT--LRGHYNSVDCCVFQPHFQELYSSGRDSNILVWVPSVRE--------PEPDDASEK-------QCLNPAYEDAWSSSSDG 394
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A6I8NHV3_ORNAN (ERCC excision repair 8, CSA ubiquitin ligase complex subunit n=5 Tax=Monotremata TaxID=9255 RepID=A0A6I8NHV3_ORNAN) HSP 1 Score: 238 bits (606), Expect = 1.840e-66 Identity = 158/450 (35.11%), Postives = 226/450 (50.22%), Query Frame = 1
Query: 28 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLW 1374
RR+GL P A R+ L+LN D +++ H + LD++ E RY+L+GG+D + L+DL+ KP +Y ++ + VGR+ P V H+ SV VQWYP DTG+F S + D +K+WDTNTL EF F+ V++ MS A +H LIAVG+ SP+ +LCD++SG+ +H L G H + + A +WSP SE++LATGSAD +LWD+RR AS CL +LDQH G + G +S A+ AH G VN LCF+ DGLHL+T GTD+R+RLW G+NT+ NY K N+ R+ A+ + P E VF P + + V+ +++ G LR H++ V CC ++P QEL + D VL W
Sbjct: 46 RRSGLDQPLRLRRAESARRVLSLELNKDRDVERVHSSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENF-TRKP-----------YYTCKAVCS-------------VGRSHPAV-------------HKFSVETVQWYPHDTGIFTSSSFDKTLKIWDTNTLQPADEFHFEGTVYSHHMSPIATKHCLIAVGTKSPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRSEYILATGSADSRVKLWDVRR--ASGCLTTLDQHN-----------------------GEKSKG-----------------------SSEAAN--TAHNGRVNGLCFTRDGLHLLTVGTDDRMRLWNSSAGKNTLVNYGKVCNESRKGLKFAISQGCSP--EFVFVPYGST--IAVYTVYS--GELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNVLAW 400
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A2K1XNW7_POPTR (Uncharacterized protein n=14 Tax=Saliceae TaxID=238069 RepID=A0A2K1XNW7_POPTR) HSP 1 Score: 238 bits (607), Expect = 1.980e-66 Identity = 163/479 (34.03%), Postives = 235/479 (49.06%), Query Frame = 1
Query: 7 LFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVG-------------VFGGRDLGNEDVGGG-GXXXXXSG---TRGYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFP---NDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSA 1383
++R + R AG T P S +++ +SR+S L L+ ++ SPH G I L VD E RYLL+G +D + ++FD+ A + G + + +S Q NG H+ ++S WYP+DTGLFV+G+ D +KVWDTN+ +V+ F KV+ AMS A H LIA G+ Q RLCDI SGAFAH+LSG H + V WS +SE++L TG D R WDIRR+G C + LDQ Q V + G + + GGG G G +GYL+ +L P + A AH G V L + DG++L++AG+D+R+RLW V++GRNT+ N+ + +P +A + S VF P + K+ DV + T R H++ V CC + + QEL T G D +L+WS A
Sbjct: 1 MWREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLLSGASDASASVFDIQHATD-----FEGGGEGALIAKHKSLITIDK--------------------QHQNG-----HKFAISSAIWYPIDTGLFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSG-HRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAG---CFLVLDQSQSQLGRRPPVLARSAVSKVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQ-RLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQTSKPIQLATAQD----SNLVFVPCMTSVKAFDVWSGKTYVT-------FRGHYEHVNCCWFSSQDQELYTGGNDRQILVWSPA 433
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A7N0ZUG6_KALFE (Uncharacterized protein n=4 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ZUG6_KALFE) HSP 1 Score: 238 bits (606), Expect = 2.890e-66 Identity = 169/501 (33.73%), Postives = 239/501 (47.70%), Query Frame = 1
Query: 28 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRTPRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQ-EXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTR---------GYLRHLKLAPHASRASKFARAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSAAPPWTSRASYLPAPLLGGAKGTKRRLGQCEDVQDQDMWS 1500
R +G P S + +L+++R++ + L+ E SPH G I L VD AE RYLL+G AD +VA+FD+ GA + + + + K +F + L +SG H+++VS WYP+DTGLF++G+ D + VWDTNT VV+ F KV+ AMS A H LIA G+ Q RLCDI SGAF H LSG H + V + WS +SE++L TG D R WDIRR+G+ L DQ Q + V R + + ++ R +L P A AH G V L + DG++L++AG+D+RLRLW V++GRNT+ NY + +P +AV + S VF P S F G R H++ V CC + QEL T G D +L+WS PP + A + + GG + RR ++DQD WS
Sbjct: 8 RESGRLRPNSFSSRLKSTRVASIQLSNHKEFVSPHKGAINCLQVDLAEGRYLLSGAADASVAVFDVQGATDYEGGGLIA-KHKSIFTVDK-------------------------LHESG-------HQYAVSSAIWYPIDTGLFITGSYDNFINVWDTNTTQVVMNFKMPGKVYRTAMSPLANSHMLIAAGTEDVQVRLCDISSGAFTHMLSG-HRDGVMSIEWSMSSEWVLMTGGCDGAIRFWDIRRAGSFRVL---DQSQSQLGRRTPILRRCESEKVLTSRSSPSSHTATNKSRIPLTDSKQSPSRNQRXXXXRKQRLHPGLLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGRNTLVNYETARLQGTKPMQLAVTQD----SALVFVPCMSSVKAFDF----WSGSISKTFRGHYESVNCCCFNFHDQELYTGGNDRQILVWS---PPRFTSADQMDTQVEGGGR---RRY----PLEDQDNWS 453
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: F6Y8S9_MONDO (Uncharacterized protein n=11 Tax=Metatheria TaxID=9263 RepID=F6Y8S9_MONDO) HSP 1 Score: 235 bits (599), Expect = 5.910e-66 Identity = 157/458 (34.28%), Postives = 222/458 (48.47%), Query Frame = 1
Query: 19 LERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFAR--AHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPRSETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLWSSA 1383
LE R+ GL PG R+ +L+LN D +++ H + LD++ E RY+L+GG+D +AL+DL+ + +V Y +S + VGR P V H++SV VQWYP DTG+F S + D +K+WDTNTL F F+ V++ MS A +H LIAVG+ P+ +LCD++SG+ +H L G H + + A +WSP E++LAT SAD +LWDIRR AS CLI+LDQH S+AS A AH G VN LCF+ DGLHL+T GTD+R+RLW G NT+ NY K N+ R+ + P E VF P + + V+ +++ G LR H++ V CC ++P QEL + D +L W A
Sbjct: 5 LEARQVGLDDPGRLRRAEATRRVLKLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGIIALYDLENF------------SRKVHYTCKSICS-------------VGRNHPDV-------------HKYSVETVQWYPHDTGMFTSSSFDKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKGPKVQLCDLKSGSCSHILQG-HRQEILAVSWSPRYEYILATASADSKVKLWDIRR--ASGCLITLDQHNG--------------------------------------------------EKSKASSEAANTAHNGRVNGLCFTRDGLHLLTIGTDDRMRLWNSSNGENTLVNYGKVCNESRKGLKFTISHGCSP--EFVFVPYGSA--IAVYTVYS--GELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNILAWVPA 365
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Match: A0A6J0SX53_9SAUR (DNA excision repair protein ERCC-8 isoform X1 n=3 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SX53_9SAUR) HSP 1 Score: 235 bits (599), Expect = 6.430e-66 Identity = 159/458 (34.72%), Postives = 218/458 (47.60%), Query Frame = 1
Query: 28 RRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWLDVDSAEERYLLTGGADCTVALFDLDGAGENKPPSVRSGKANEVFYRSRSAAAXXSRRRRPKELREVGRT-PRVPLSQSGNGSSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVVEFDFKDKVFAAAMSAAAGQHHLIAVGSGSPQARLCDIRSGAFAHSLSGGHSEAVWACAWSPTSEFLLATGSADQTARLWDIRRSGASACLISLDQHQEXXXXXXXXXXXHRVGVFGGRDLGNEDVGGGGXXXXXSGTRGYLRHLKLAPHASRASKFA--RAHAGPVNSLCFSPDGLHLVTAGTDNRLRLWQVDTGRNTMTNYLKTTNKRRRPFGMAVVKPAGPR------SETVFFPNDKSGDVLVFPLHTTDGRPKGHLRAHFDPVQCCAYRPRTQELVTCGADGLVLLW 1374
R+ GL P R+ L+LN D +I+ H I LD++ E RY+L+GG+D + L+DL+ G KP Y ++ + VGR+ P V H+ SV VQWYP DTG+F S + D +K+WDTNTL V F F+ V++ MS A +H LIAVG+ +P+ +LCD++SG+ +H L G H + V A +WSP E++LAT SAD +LWD+RR ASACL++LDQH S+AS A AH G VN LCF+ DGLHL+T GTD+R+RLW +G NT+ NY K N+ R+ AV P S T+ SGD++ LR H+ V CC ++P QEL + G DG +L W
Sbjct: 8 RQTGLDDPLRLRRAESTRRVLSLELNKDRDIERIHGSGINTLDIEPVESRYMLSGGSDGVIVLYDLENLG-GKP-----------CYTCKAVCS-------------VGRSHPDV-------------HKFSVETVQWYPHDTGMFTSSSFDKTLKIWDTNTLQSVEVFTFEGTVYSHHMSPIATRHCLIAVGTRNPKVQLCDLKSGSCSHILQG-HKQEVLAVSWSPRYEYILATASADSRVKLWDVRR--ASACLLTLDQHNG--------------------------------------------------EKSKASSEAVNTAHNGRVNGLCFTNDGLHLLTIGTDDRMRLWNSSSGENTLVNYGKVCNESRKGVKFAVSHGCSPEFAFVPYSSTIALYTVYSGDLITV------------LRGHYSSVDCCVFQPNFQELYSSGRDGNILAW 362 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.91.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig178.91.2 >prot_P-littoralis_Contig178.91.2 ID=prot_P-littoralis_Contig178.91.2|Name=mRNA_P-littoralis_Contig178.91.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=585bp MALFRALERRRAGLTSPGSTADQLRASRLSRLDLNVDVEIKSPHYGPITWback to top mRNA from alignment at P-littoralis_Contig178:420898..433915- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig178.91.2 ID=mRNA_P-littoralis_Contig178.91.2|Name=mRNA_P-littoralis_Contig178.91.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13018bp|location=Sequence derived from alignment at P-littoralis_Contig178:420898..433915- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig178:420898..433915- >mRNA_P-littoralis_Contig178.91.2 ID=mRNA_P-littoralis_Contig178.91.2|Name=mRNA_P-littoralis_Contig178.91.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1755bp|location=Sequence derived from alignment at P-littoralis_Contig178:420898..433915- (Pylaiella littoralis U1_48)back to top |