mRNA_P-littoralis_Contig178.71.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig178.71.1
Unique NamemRNA_P-littoralis_Contig178.71.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 1.270e-130
Identity = 232/458 (50.66%), Postives = 289/458 (63.10%), Query Frame = 3
Query:  471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAAIAASYKCAELPAARFQKVGVGTREL-------LERAETRRSRVRVA 1817
            RS SSNA ++ +K +  +QFP A+    KFV+PA  RWMVV DGA  L  RWEQVEW FC +A+ +L  T ++ +W QSA++LRDP +RV  +FTA+LGELL  WAY W+RG GGFFLKG   G+GR L+ GMRLVE+ADFS L   K+ET+R   +    A+L+  +TTL       FM NFS D+GFF     RW KWMERHQ+L LSMAR+G   F+A   ++G   +E  VG +FARAFLHV WS  Y    RT+RE  YR QL K+L G T  +RKDELTFG FS  D D  +R  LEQ+A     +  VD  AP+ TS  A L  F  LY++ CHRFYFVPIHQQL+E+FFSKFD+C QKTD +  D VR G ++S ESR I    ATGE+I  AGK+ +  A  A A S+  A  PA    +  V   E        LE+   RR RV  A
Sbjct:   36 RSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKGE--GVGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEVDQGAPKGTSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSH--ARKPAENLSRKRVLEPEAADDLLVTLEKEGNRRPRVTAA 489          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 2.600e-120
Identity = 210/418 (50.24%), Postives = 266/418 (63.64%), Query Frame = 3
Query:  471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGH-FMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAAIAASY 1715
            RS  SNA+++ +K + A QFP+A+    KF++PA  RWMVV DGA  L +RWEQVEW FC +A+ +L  T ++ +W QSA +LRDP +RV  +FTA+LGELL  WAY W+ G GGFFLKG   G+GR L+  MRLVE ADFS L  +K+ET+R   +    ALL   RTTL     G  F V     Q F      RW K M+RHQEL LSMAR+G   FYA   ++GG  +E  VG +FARAF HV W   Y    RT+RE  YR QL K+L G T+ +RKDELT G FS  DGD  +R  LEQ+A     +  +D  AP+ TS  A L     LY + CHRFYFVPIHQQL+E+FFSK+D+C +KTD +  D VR G ++S ESR I  V A  ++I GAGK+ +  AT A A S+
Sbjct:   36 RSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGE--GVGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSDPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEPRTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEIDESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATEAKAISH 451          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 2.190e-98
Identity = 184/379 (48.55%), Postives = 230/379 (60.69%), Query Frame = 3
Query:  582 MVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAAIAASY 1715
            MVV DGA  L +RWEQVE  FC +A  +L  T  + +W QSA++LRDP+  V  +FTA+L ELL  WAY W+ G GGFFLKG   G+ R L+ GMRLVE+ADFS L  +K+ET+R   +    ALL   R TL    +  FM+ FS D+ FF     RW KWM+RHQEL LSMAR+G   FYA   ++GG  +E  VG +FARAFLHV W   Y    RT+RE  YR QL K+L G T+ +RKDELTFG FS  DGD  +R  LEQ+A        +D  AP+STS+ A LL F  LY++ CHRFYFVPIHQQL+E+FFSK   C                             ATG++I GAG + ++ AT A A S+
Sbjct:    1 MVVIDGAKLLCERWEQVERLFCDFA-RNLNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKGE--GVDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAFSEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEPRTEREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEIDESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVCAD---------------------------ATGDQISGAGNKVLTEATEAKAISH 349          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 2.530e-82
Identity = 156/313 (49.84%), Postives = 193/313 (61.66%), Query Frame = 3
Query:  582 MVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWK-VLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQ 1517
            MV  D A  L DRWEQV W FC +A+ +L  T ++ +W QS +LLRDP +RV  + TA+LGELL  WAY W+RG GGFFLK    G+GR L+ GMRLVE+ADFS L   K+ET+R   E           T    ++L  F  N S D+GFF L   RW KWMERHQ+L LSMAR+G   FYA   ++    +E  VG +FARAFLHV W   Y    RT+RE  +R QL K     T+ +RKDELTFG FS  D D  +R  LEQ+A    ++  VD  AP+ TS  A L  +  LY++ CHRFYFVPIHQQ
Sbjct:    1 MVDTDRAKLLCDRWEQVSWLFCKYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLKCE--GVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPE-----------TYFAAEKL--FTTNCSEDKGFFALFKKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEPRTEREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEVDQGAPKGTSALACLFDYPLLYKLVCHRFYFVPIHQQ 298          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 6.530e-72
Identity = 175/441 (39.68%), Postives = 231/441 (52.38%), Query Frame = 3
Query:  462 MFVRSNSSNAAWEYKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQE----------------------LGHFMVNFSPDQ-GFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVP-MEYPVGQQFARAFLHVVWSEKYRQASRT--QREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHA--EAVVDVDAPEST---SKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSA 1691
            M  RS+SS  +WE +  N            KF++PA  RWMVV+D A  L DRW++V W    WA+  LL T +  +W +S  +L DP IRV   F   L +++L WAY W+RG+GG+ L+G  GG+   L  GMRL ++ADFSLL  E++E LR   +   P LL  A  TL  +E                      L HFM NF  ++ G F    +RW+KWM+ HQ L  SMARL  S F+  K  G    +E+ VGQ++ARA L  +W E    A       E  Y   L  +L  A   + KDELTFG FS  +   + R  +E+++  A    E VVD DA       S F  +  F  LYE A H   F PIHQQLV+S  S +DTC QK D+     VR GQFRS +SR +  + AT +EI  AG + I+ A
Sbjct:  282 MECRSDSSCISWE-RFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGR-GGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVA 720          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.430e-59
Identity = 194/586 (33.11%), Postives = 243/586 (41.47%), Query Frame = 3
Query:  471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASE-------------------------HLLLTA--------------------------------------YKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLA----------------------RTT----------------------------LKTQELGH------------------FMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHITNVGATGEEICGAGKRAISSATAA--IAASYKCAE-LPAARF--QKVGVGTRELLERAETRRSRVRVA 1817
            RS SSNA ++ +K + A QFP+A+    KF++PA  RWMVV DGA  L +RWEQVEW FC +A+                          H++ TA                                      Y+ +W QSA +LRDP +RV  +FTA+LGELL  WAY W+ G GGFFLKG   G+GR L  GMRLVE+ADFS L  +K+ET+    +        LA                      RTT                            L  QEL                    FM+NFS D  FF     RW KWM+RHQEL LSMAR+G   FY                                  SRT         +G  L        KDELTFG FS  DGD  +R   EQ+A     +  +D  AP+ TS  A L  F  LY++ CHRFYFVP  QQL+E+FFSK   C                             ATG+ I GAGK+ +  AT A  I+ + K AE L   R    +      ++LE+  +RR RV  A
Sbjct:   36 RSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGE--GVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFXQQGYLAHPGNTFHXXXXXXXXXXXVPHNRTTTWHCYKYIYHGRRLFPGMRSVEVADFSRLLLQELETIRKDPQTYFAALLDRAKLFMLNFSEDSFFFAEVKKRWIKWMQRHQELPLSMARIGCPSFY----------------------------------SRT-------GTMGGGL--------KDELTFGEFSGVDGDLSVRSEPEQYANSGWGDKEIDESAPKGTSALARLFDFPLLYQLVCHRFYFVPNPQQLIEAFFSKDIVCAD---------------------------ATGDRIRGAGKKVLKEATEAKPISHARKLAENLSRKRVLEPEAAEDLLDVLEKEGSRRPRVTAA 543          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.320e-56
Identity = 110/220 (50.00%), Postives = 143/220 (65.00%), Query Frame = 3
Query:  957 LKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYA-WKVLGGVPMEYPVGQQFARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRFSLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLL-KFGPLYEMACHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRS 1610
            ++ A T     E  HFMVNFS D  FF     RW KWM+RHQEL LSMAR+G   FYA   ++G   +E  VG ++ARAFLHV W E+Y    R++RE  YRVQLG++  G    +RKDELTFG FS+ + D +MR  +E +AE    +  VD +A + T+    L  KF  LY+  C RFYFVPIHQQL+E+FFSK+DTC +KTD +V DSVR G +++
Sbjct:  148 IRPAETRWMVAEKKHFMVNFSEDSFFFAEFNMRWKKWMQRHQELPLSMARIGCPSFYARMGIMGKGAVEQAVGPEYARAFLHVGWPERYEGEPRSEREREYRVQLGEDFGGVIDARRKDELTFGLFSIVEEDAEMRCEVEGYAESGFGDKEVDEEAEKGTTALVRLFEKFPRLYKFVCVRFYFVPIHQQLIEAFFSKYDTCAKKTDVAVMDSVRVGSWQT 367          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.380e-49
Identity = 97/187 (51.87%), Postives = 125/187 (66.84%), Query Frame = 3
Query:  471 RSNSSNAAWE-YKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQ 1028
            RS SSN  ++ +K + A QFP+A+    KF++PA  RWMVV DGA  L +RWEQVEW FC +A+ +L  T ++ +W QSA +LRDP +RV  +FTA+LGELL  WAY W+ G GGFFLKG   G+GR L  GMRLVE+ADFS L  +K+ET+    +    ALL   RTTL       FM+NFS D+
Sbjct:   36 RSGSSNGKFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGE--GVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFAALLDRVRTTLSDPMAKVFMLNFSEDR 220          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 3.680e-47
Identity = 103/212 (48.58%), Postives = 133/212 (62.74%), Query Frame = 3
Query:  618 RWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQGFFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVPMEYPV-GQQFARAFLHVVWSEKYRQASRTQREE 1250
            RW++VE     +A+ +L  T ++ +W QSA++LR+P +RV  +FTA+LGELL  WA  W+RG GGFFLKG   G+GR L+ GMRLVE+AD S L   K+ET+R   +    A+L+  RTTL       FM NFS D+ FF     RW KWMERHQ+L LSMAR+    FYA     G+  +  V G +FARAFLHV W   Y    RT+R E
Sbjct:   46 RWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKGE--GVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSEDKVFFAEFKKRWIKWMERHQQLPLSMARIACPSFYART---GIMADGAVEGPEFARAFLHVAWPGLYEGEPRTERGE 252          
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Match: A0A6H5KE81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE81_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 2.680e-38
Identity = 79/153 (51.63%), Postives = 107/153 (69.93%), Query Frame = 3
Query:  471 RSNSSNAAW-EYKVLNAEQFPHARSRP*KFVKPAGARWMVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYIRVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVELADFSLLFHEKMETLR 926
            RSNSSN  +  ++ L A++FP A+    KF+KPA  RWMVV DGA  L +RW++V W F  WA+ ++  T Y+ +W +SA  L+DP + VQ +F A+LGEL+  WAY W+RG GGFFLK    G+GR L+ GMRLVE+ADFS L  +K+ET+R
Sbjct:    8 RSNSSNTNFLRWQKLVADEFPAAKPWTKKFIKPAETRWMVVMDGAKILFERWDEVAWLFGEWAACNIGKTTYRNYWLKSAVALQDPLMLVQVMFAARLGELVFDWAYNWIRGKGGFFLKCE--GVGRRLFPGMRLVEVADFSRLLLQKVETIR 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FIQ1_ECTSI1.270e-13050.66Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JI13_9PHAE2.600e-12050.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMW8_9PHAE2.190e-9848.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQF6_9PHAE2.530e-8249.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU73_9PHAE6.530e-7239.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH75_9PHAE1.430e-5933.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR45_9PHAE1.320e-5650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW26_9PHAE4.380e-4951.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L8G1_9PHAE3.680e-4748.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE81_9PHAE2.680e-3851.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:375549..378773 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1956
Hectar predicted targeting categoryother localisation
Exons3
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-00_010460.1
Cds size1254
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789855.4571366-UTR-P-littoralis_Contig178:375548..3756291680789855.4571366-UTR-P-littoralis_Contig178:375548..375629Pylaiella littoralis U1_48UTRP-littoralis_Contig178 375549..375629 +
1680789855.46734-UTR-P-littoralis_Contig178:376459..3769591680789855.46734-UTR-P-littoralis_Contig178:376459..376959Pylaiella littoralis U1_48UTRP-littoralis_Contig178 376460..376959 +
1680789855.498807-UTR-P-littoralis_Contig178:378652..3787731680789855.498807-UTR-P-littoralis_Contig178:378652..378773Pylaiella littoralis U1_48UTRP-littoralis_Contig178 378653..378773 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789855.4794686-CDS-P-littoralis_Contig178:376959..3773701680789855.4794686-CDS-P-littoralis_Contig178:376959..377370Pylaiella littoralis U1_48CDSP-littoralis_Contig178 376960..377370 +
1680789855.4884813-CDS-P-littoralis_Contig178:377809..3786521680789855.4884813-CDS-P-littoralis_Contig178:377809..378652Pylaiella littoralis U1_48CDSP-littoralis_Contig178 377810..378652 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.71.1prot_P-littoralis_Contig178.71.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig178 376960..378652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig178.71.1

>prot_P-littoralis_Contig178.71.1 ID=prot_P-littoralis_Contig178.71.1|Name=mRNA_P-littoralis_Contig178.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp
MVVFDGATFLNDRWEQVEWRFCTWASEHLLLTAYKFFWRQSAFLLRDPYI
RVQDIFTAQLGELLLLWAYRWLRGDGGFFLKGADGGIGRLLYRGMRLVEL
ADFSLLFHEKMETLRAGHEVCSPALLKLARTTLKTQELGHFMVNFSPDQG
FFTLAASRWSKWMERHQELLLSMARLGRSPFYAWKVLGGVPMEYPVGQQF
ARAFLHVVWSEKYRQASRTQREETYRVQLGKNLEGATKPKRKDELTFGRF
SLFDGDEKMRKALEQFAEPAHAEAVVDVDAPESTSKFAPLLKFGPLYEMA
CHRFYFVPIHQQLVESFFSKFDTCPQKTDTSVFDSVRCGQFRSQESRHIT
NVGATGEEICGAGKRAISSATAAIAASYKCAELPAARFQKVGVGTRELLE
RAETRRSRVRVASDLDG*
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mRNA from alignment at P-littoralis_Contig178:375549..378773+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig178.71.1 ID=mRNA_P-littoralis_Contig178.71.1|Name=mRNA_P-littoralis_Contig178.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3225bp|location=Sequence derived from alignment at P-littoralis_Contig178:375549..378773+ (Pylaiella littoralis U1_48)
AGGCATCCCCGTTCGGGCGACATACACCGCGGCCCAAGGAGGCGCTACCC TCCTCCACTCCTATTGGTGTTGCTTCGTGTGGTGAGTTCCGAACGACGTT TGATATGTTTGCGCTCATATGTGCTGCTCGCTGTGAAAGAGTCCCTCTCC TGCGTACCAGCCAGTAGCTTATGTCCAGTGTTGCCCGCCGGGTATGTTTC CAGGATTTTGAAACCATTGTACAATTTGCACAAACGACTGCTTGTAATGA GCCTTCGGGGGGCGACTCCGAGAATGTGAGACAGCACAGCAGTCCTAGGG CGTGTCTATCATCGAATTTCATGCACCACAACAGCAGTAGACCTTGTCGA CACAAAAATTCCTTCGAACTCGGCTCGAACAACGTAACACCCCGGTCGCC CCGGTGGACTATTGGTCCCGTCGTTGGCCACTAGATTCAGAGGAACGGGG GTTCGATTCCCAGTGAATGTGTTCCTTTGCTACTTTGAAAGCGGCTATGC TGTTAGTAAAAGCAGATTCGGCTTCGCCGACAAGGGTAGGGACCGCGGAT TACTGCTCGCGAGAAAAAAATCTCACGCATGTACCGCAGAAGGAAGGTGG GGGTAACTCCTCCTGTGTTGACCTTCCTCCTGTGTGACCCCGTCGATGGG CCTAGCCTGTAGTTTGAACCGCAGGGTGCAGACTAGTGTGCCAGAGAATA TGGGAGACAACACACCAGCACTCTGCTACGGTGTCAATTGCGATTTTATT TTGTACAATGTAGGATTCTTTTTCAAAAAGCGCCCGGATCCTCTTTGTTG GAATATCTATCGAGCGAATCAAATATCGAGAATCGGTCCTCGAATTCCCA GGAATTCCCAGTAGCCCTTCTTCGTGCACATGTACGCTCGCTCTTATTGT GCTACTCTCAGCTTTCAGCTGCAGCTGCAGCAGCAATGGCAGCAGCAGCA GCAGCAGACGAAAGCTGCGCCCGGCAGCAGCCCTCAATCTACTATGTCCC AGACTTCCCCCAACCAGCAGCCAGTGGGGGGTAGGTCAGAGGGAGACCCT GTTGTCTTCCCCGAAATGACTGCCGCGGACGCAGCTGGAGCTGCCTCTGC TGCTGGAGCTGCTTCTCTGGCACCAACCGATGCTGCTGCTGCATCTGAAT TGGCTGGTCTTCAGGACGGGCTAGTCTATGCGGTACGCTTGGGGTGTGTA CTGCACATCCTGCACATCGCCATTACCGCAGGGCTCACCAGCATGTATTT CATGGGCCCCCTCGGCAAGGGGCACGAGTAGGTACGGGATCATGTTTGTT CGATCCAACTCATCGAACGCGGCCTGGGAGTACAAGGTACTGAATGCCGA GCAGTTCCCCCACGCCCGAAGTAGACCCTAAAAGTTTGTTAAGCCTGCGG GGGCAAGGTGGATGGTGGTATTCGATGGTGCAACTTTCCTCAATGATCGC TGGGAGCAGGTTGAGTGGCGTTTTTGCACGTGGGCGAGCGAGCACCTGCT GCTGACCGCCTACAAATTTTTTTGGCGGCAATCGGCCTTTTTGCTTCGAG ACCCGTACATCAGAGTTCAAGACATTTTCACAGCGCAGCTCGGCGAGTTG TTGCTTCTCTGGGCGTACCGTTGGCTACGCGGCGATGGTGGGTTTTTCCT CAAGGGTGCAGACGGGGGGATCGGGCGGCTGCTGTATCGTGGGATGCGTT TGGTGGAGTTGGCTGACTTCTCTCTTCTCTTTCATGAAAAGATGGAAACC CTGCGGGCAGGCCATGAAGTTTGTTCCCCAGCTTTGCTAAAGCTGGCGCG AACGACCCTGAAAACGCAAGAGGTGAGAATCCGTGAAATGCATGCTTGAT GTAGAAGGCATGCCAGTGTTGAGCAGCCCAATAGGCATTGCCTTGCATTC CGGTGCCTGTTGTTGCGTGTCGGCAGTGCTGCGTGTTGTTTCTGTTGCGT GTCGCGTGTTGTCCCTTTTGTTCATGCCGGCAATTATAATTTGTACACTA CCAAAGACGTTTACCTCCGCGAGCGTTTTTTTCGTTTTTTCCCACACACC TCATGGTCGTCTCTTTTTTGTTTCTAGATGAAAAACATATTTCACTGCCC GCTGTTGCGGCTGAAGATGTTGCTGCTGCTGCAGGTGCTTTGCTGCTGCT GCATCTGGTGCTACCCAATACCTCTGCTGCTGCATCCGCTCCTTCTTAAA CGTACTGCTGCTGTTGCCTGGCCCAACCTTCGTATGTCGTTACTGCTGTA TTTTATTGCAGTTGGGACACTTTATGGTGAACTTCTCGCCTGACCAAGGA TTCTTTACTTTGGCAGCAAGCCGTTGGAGCAAATGGATGGAGAGGCACCA AGAGCTGCTTTTGAGTATGGCGCGGCTGGGCCGCTCGCCGTTTTACGCTT GGAAGGTGTTGGGTGGGGTGCCTATGGAGTATCCGGTGGGCCAGCAGTTT GCGAGAGCTTTTCTTCATGTGGTGTGGTCAGAGAAGTACAGACAGGCGTC GCGCACGCAGCGCGAGGAGACGTACCGAGTTCAGCTTGGCAAAAACCTCG AAGGTGCTACAAAACCGAAAAGGAAAGATGAACTGACATTTGGACGTTTT TCTCTGTTTGATGGTGATGAAAAAATGAGGAAGGCTTTAGAGCAGTTTGC GGAGCCTGCCCATGCTGAAGCGGTGGTTGATGTCGATGCGCCAGAAAGCA CATCGAAGTTCGCACCGCTTTTGAAGTTCGGTCCCTTGTACGAAATGGCA TGTCACCGGTTTTACTTTGTACCCATCCACCAGCAGCTCGTGGAGTCTTT CTTTTCCAAGTTTGATACGTGCCCACAGAAGACGGACACGTCGGTATTTG ATTCCGTTCGTTGTGGGCAGTTTCGGTCTCAAGAGTCAAGGCACATCACA AACGTTGGTGCGACAGGGGAGGAGATTTGCGGAGCGGGAAAAAGGGCGAT TTCGAGTGCAACAGCCGCGATTGCTGCAAGCTACAAGTGTGCAGAGCTGC CAGCAGCACGTTTTCAGAAAGTGGGTGTTGGAACCAGAGAGTTGCTGGAG CGAGCGGAGACGAGGCGGTCGAGGGTGCGTGTTGCTTCGGACTTAGACGG TTGAAAAATGGCAGGATACTGCTGTGAATGGTTATGTCATATCTGCGTGA GTGATGATGGGTGATCGGTTTTTGTCGTGAAAAAAAAAGACCGAACAATT TTCATTCCGTGTTTCTGGTTTTGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig178:375549..378773+

>mRNA_P-littoralis_Contig178.71.1 ID=mRNA_P-littoralis_Contig178.71.1|Name=mRNA_P-littoralis_Contig178.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig178:375549..378773+ (Pylaiella littoralis U1_48)
ATGGTGGTATTCGATGGTGCAACTTTCCTCAATGATCGCTGGGAGCAGGT
TGAGTGGCGTTTTTGCACGTGGGCGAGCGAGCACCTGCTGCTGACCGCCT
ACAAATTTTTTTGGCGGCAATCGGCCTTTTTGCTTCGAGACCCGTACATC
AGAGTTCAAGACATTTTCACAGCGCAGCTCGGCGAGTTGTTGCTTCTCTG
GGCGTACCGTTGGCTACGCGGCGATGGTGGGTTTTTCCTCAAGGGTGCAG
ACGGGGGGATCGGGCGGCTGCTGTATCGTGGGATGCGTTTGGTGGAGTTG
GCTGACTTCTCTCTTCTCTTTCATGAAAAGATGGAAACCCTGCGGGCAGG
CCATGAAGTTTGTTCCCCAGCTTTGCTAAAGCTGGCGCGAACGACCCTGA
AAACGCAAGAGTTGGGACACTTTATGGTGAACTTCTCGCCTGACCAAGGA
TTCTTTACTTTGGCAGCAAGCCGTTGGAGCAAATGGATGGAGAGGCACCA
AGAGCTGCTTTTGAGTATGGCGCGGCTGGGCCGCTCGCCGTTTTACGCTT
GGAAGGTGTTGGGTGGGGTGCCTATGGAGTATCCGGTGGGCCAGCAGTTT
GCGAGAGCTTTTCTTCATGTGGTGTGGTCAGAGAAGTACAGACAGGCGTC
GCGCACGCAGCGCGAGGAGACGTACCGAGTTCAGCTTGGCAAAAACCTCG
AAGGTGCTACAAAACCGAAAAGGAAAGATGAACTGACATTTGGACGTTTT
TCTCTGTTTGATGGTGATGAAAAAATGAGGAAGGCTTTAGAGCAGTTTGC
GGAGCCTGCCCATGCTGAAGCGGTGGTTGATGTCGATGCGCCAGAAAGCA
CATCGAAGTTCGCACCGCTTTTGAAGTTCGGTCCCTTGTACGAAATGGCA
TGTCACCGGTTTTACTTTGTACCCATCCACCAGCAGCTCGTGGAGTCTTT
CTTTTCCAAGTTTGATACGTGCCCACAGAAGACGGACACGTCGGTATTTG
ATTCCGTTCGTTGTGGGCAGTTTCGGTCTCAAGAGTCAAGGCACATCACA
AACGTTGGTGCGACAGGGGAGGAGATTTGCGGAGCGGGAAAAAGGGCGAT
TTCGAGTGCAACAGCCGCGATTGCTGCAAGCTACAAGTGTGCAGAGCTGC
CAGCAGCACGTTTTCAGAAAGTGGGTGTTGGAACCAGAGAGTTGCTGGAG
CGAGCGGAGACGAGGCGGTCGAGGGTGCGTGTTGCTTCGGACTTAGACGG
TTGA
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