mRNA_P-littoralis_Contig178.31.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig178.31.1
Unique NamemRNA_P-littoralis_Contig178.31.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig178.31.1 vs. uniprot
Match: D7FSF9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF9_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 5.170e-32
Identity = 190/299 (63.55%), Postives = 208/299 (69.57%), Query Frame = 1 
Query:    1 PLGDARIRKLSRASASVLLGTAAAAPRFSAGCDDDDDVGFLGGTKFARRPRRSYSCPSTRSRKTAKVAPDTGRLSASPRTPTITXXXXXXXXXXXXXXXXXXXNSGILPLLFENAVYNL-SGVIAAFQQGLRTCDYKDGDLAARNGHMHIVTKVAAEFSDQAMVLAAGQGHLDMVIYLHHNRREGATAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEWLTVNMPALAAXXXXXXXXXXXXXXXXXRFLHGARSEGC 894
            P  D+   KLSR+S+SVL    +  PR   G DDD++    G ++   RPRRS+SCPS   RKTAK+A D    S  PR                         S     L ENAV NL  GVI  FQQGLR  DY DGDLAA+NGHMHIVT+VA  FSD+AM LAA QGHL+MV YLH +R EG T E    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V WLT N+P+LAAXXXXXXXXXXXXXXXXX +LH AR EGC
Sbjct:   98 PPADSGTNKLSRSSSSVLRKLLS--PR---GLDDDNED--AGASRKNHRPRRSFSCPS---RKTAKLATDDRNFSG-PRC--------------------CGGGSSTAAWLLENAVNNLLGGVITRFQQGLRAGDYNDGDLAAKNGHMHIVTRVATTFSDRAMALAAAQGHLEMVTYLHRSREEGTTTEALDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRWLTSNIPSLAAXXXXXXXXXXXXXXXXXXYLHEARGEGC 365
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSF9_ECTSI5.170e-3263.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:176558..186902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FSF9
PFAMsAnk_2,Ank_3,Ank_4,HET,NACHT,Pkinase
Model size1557
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue8.47e-33
EggNOG OGsKOG4369@1|root,KOG4369@2759|Eukaryota
Descriptionpositive regulation of MDA-5 signaling pathway
Cds size1557
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.31.1prot_P-littoralis_Contig178.31.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig178 176558..186902 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789854.509002-CDS-P-littoralis_Contig178:176557..1767581680789854.509002-CDS-P-littoralis_Contig178:176557..176758Pylaiella littoralis U1_48CDSP-littoralis_Contig178 176558..176758 -
1680789854.5336304-CDS-P-littoralis_Contig178:179726..1798581680789854.5336304-CDS-P-littoralis_Contig178:179726..179858Pylaiella littoralis U1_48CDSP-littoralis_Contig178 179727..179858 -
1680789854.548852-CDS-P-littoralis_Contig178:181194..1812781680789854.548852-CDS-P-littoralis_Contig178:181194..181278Pylaiella littoralis U1_48CDSP-littoralis_Contig178 181195..181278 -
1680789854.55977-CDS-P-littoralis_Contig178:182808..1830091680789854.55977-CDS-P-littoralis_Contig178:182808..183009Pylaiella littoralis U1_48CDSP-littoralis_Contig178 182809..183009 -
1680789854.5687647-CDS-P-littoralis_Contig178:183565..1838201680789854.5687647-CDS-P-littoralis_Contig178:183565..183820Pylaiella littoralis U1_48CDSP-littoralis_Contig178 183566..183820 -
1680789854.577166-CDS-P-littoralis_Contig178:186218..1869021680789854.577166-CDS-P-littoralis_Contig178:186218..186902Pylaiella littoralis U1_48CDSP-littoralis_Contig178 186219..186902 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig178.31.1

>prot_P-littoralis_Contig178.31.1 ID=prot_P-littoralis_Contig178.31.1|Name=mRNA_P-littoralis_Contig178.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=519bp
PLGDARIRKLSRASASVLLGTAAAAPRFSAGCDDDDDVGFLGGTKFARRP
RRSYSCPSTRSRKTAKVAPDTGRLSASPRTPTITPTSSSTLSSSSSSSSS
SSINSGILPLLFENAVYNLSGVIAAFQQGLRTCDYKDGDLAARNGHMHIV
TKVAAEFSDQAMVLAAGQGHLDMVIYLHHNRREGATAEAMDLAATFGHLD
VVKFLHENRREGATTRAMDGAARNDHLDVLVFLREKRSEGATPAAVDSAA
LNGHLRVVEWLTVNMPALAATTAAMDGAAYAGHLDVVRFLHGARSEGCTT
EAMDLAARRGHLEVLQFLHENRREGCTTDAVDNAASGAHLDILKFLTSNR
AEGGTVYAMTLAAWHGHLDVVKWLHDNRDEGCTTSAMNGAAYNSHLEVVR
WLHENRTEGCTKSAMDASAMHGHLEVVKWLSEHRSEGCSTNAMDWAAKEG
KLEALQWLHRNRSEGCTQAAGDWAAGNGHASVLRWLLSKRRVGYSARAVN
WAAKNGHPEIVTLLEEFR*
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mRNA from alignment at P-littoralis_Contig178:176558..186902-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig178.31.1 ID=mRNA_P-littoralis_Contig178.31.1|Name=mRNA_P-littoralis_Contig178.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10345bp|location=Sequence derived from alignment at P-littoralis_Contig178:176558..186902- (Pylaiella littoralis U1_48)
CCCCTTGGAGACGCACGCATCAGGAAGCTCTCTCGTGCATCCGCGTCGGT
TTTGCTGGGAACAGCAGCAGCAGCACCGCGGTTTTCCGCTGGATGTGACG
ACGACGATGACGTCGGCTTCCTGGGTGGGACGAAGTTCGCTCGGAGGCCA
CGAAGGTCGTACAGCTGCCCTTCCACACGCAGTCGTAAAACAGCAAAGGT
TGCACCAGACACGGGCCGGCTTTCTGCATCTCCCCGCACTCCTACTATTA
CACCTACGAGTAGTAGTACTCTCTCCAGCAGCAGCAGCAGTAGCAGCAGC
AGCAGCATCAATAGTGGTATCTTGCCCTTGCTCTTCGAAAATGCAGTGTA
CAACCTCAGTGGCGTAATCGCCGCGTTCCAGCAGGGCCTCCGCACCTGCG
ACTATAAGGACGGGGACCTGGCCGCAAGGAACGGTCATATGCACATCGTG
ACGAAGGTGGCGGCCGAGTTTTCTGACCAGGCGATGGTGCTCGCGGCGGG
ACAAGGGCACCTCGACATGGTGATTTATCTCCACCACAACCGGAGGGAGG
GGGCTACCGCCGAAGCAATGGACCTCGCGGCGACCTTCGGGCATCTCGAC
GTGGTGAAATTTTTGCACGAGAACCGCAGGGAGGGAGCAACCACAAGAGC
AATGGACGGGGCAGCGCGTAACGACCACTTAGACGTGAGCATATCCATAT
TACCTACAGCAACCACGTCCTTGGGGTATGACAGTGTAGAAGACGGAGTG
CATACGTGTGTGTGTGTTGTCATCCCATATTCTCTGGCACACTAGTCTGC
AAACTACAGGCTAGGCCCATCGACGGGGTCACACAGGAGGAAGGTCAACA
CAGGAGGAGTTACCCCCACCTTCCTTCTGCGGTACATGCGTGAGATTTTT
CTCGCGAGCAGGGGTCCGCGGTCCCTACCCTCGTCGGCGAAGCCGAATCT
GATTTTACTAACAGCATAGCCGCTTTCAAAGTAGCAAAGGAACACATTCA
CCGGGAATCGAACCCCCGTTCCTGTGCATACGTACATACATGCGACTTGG
AAGCGTCCAATGTTATACTGTACTGCTGTGTAATCGCACTGTCTCGTACC
ATAGGCCGTTCAGGTACATAAATTTCAGGTTTCGCCCATATATTGATATT
TAGTATGGATATTTCTGGTAAAACGGACGCAAAAATCACAGCAGTTAATA
GAGAGACGACAGCACACATTTTTTTTTCTTACAAAAAGACATCAATGATG
TGTTCCCCTCTCTCTAGACGCGGATCCAGCGAGATTAGCAACGAATACAG
AAGAGTGATACATTCACTTGTGTTTCTACAACTCGACAGATAAAATATCT
TGTAACATATTTTTCCGATCGTGCTTTCCGACACGGCCCAGCGTTCGGAA
AACGTGGGATTTTCCGGCAGAAATCCGATCAAAGGCCGATCAGAAAATTA
AGTTCGGAAAAAGCTGTTTTCCGGGCCTATAAAAAGCCTAATTATAATTT
TCAGCTAATTAAAAAAAAAATCGGAACCGGTTGTTTTTCGACAAGATTTC
CCGGGATTACAAGAGACCGCCTCAATACTTGGAATAACTGTTCGTATTTG
GTTTCTCTGCCCAAATTCCAAAATACCGCGGTCTTTGCTAGGCATTATTT
GAAATGCGATATTTTACCTGTGACACACAAAACCGAAGTGAGTGATTCTA
TCAGAAAATAAGTTGAAGTTTAAGTACTTGTACTATGAATGTGGCCGTGT
TTGGAAATAATAGAGTTAGCAGATTGCGGGAGAGGACAACAACAACAGCA
CCGCACCTGGAACAACAGCCGAAAAAGCAATTTTGTGTGGCTTGTGTCAC
GAACAAATAAGTGAACAATAATAGCTGAGCAAGAGGAGCAGCAGCCGAGG
AGGGGGGCTGCTGCTACTTTCTGTGGTGTTGCTGCTGCTGCTGTTGCGTG
CTGCTGTCCATAAATATGCCCGCCATCTGCCTGCGTTTGCCTGCCGTCAT
CATTCATTCCATCGTTCCCCAATGAATGAAGCCACGGCGATGACAAACCC
ATCTCCCGTGAGCTGCGAGTATGGTCCCCCTCGTGCTGTTATCGTTTGGG
TAAGGATTATACCGGTTTGTTTGCAAAGTAAGCTTGCTCATGGCTGTGAT
ATGTTGTAATATAGAGAGCGAGAGCTATCTCACTTGTGTACCACTTCCAA
TTTGCGTACTTTTTATACATACAGCAGTGTAAATGCTGCTGTACAGCAGA
CCGGCCGATGGATTTTTCTTTTTTCTTTTCGCATGAGTTGGCGATGAGCA
GACCTATGTTGCGGACGTACCGATGTAACCCTGACCCGAGCGATCACGAC
GCGAGGAGGATCATACACACACCCAGCTCACAGAAGATGTATTTGTCATT
GTTGTGGCTAATTTTCGAAAGTGGTGAACAAGCAGCGGCAGCTTTTTGTC
GTTTCTTTCTTTTTCGAATGCATGTATTATGTGTTTGACATCATCAACAA
CTTTCTCCGAGCGCGTCGACCCCTTGATGGCTCGAACAATCCCTGTTTGA
AGGCCCATGTACACACCTGACGGGGGATTGGTGTGTCATCGCTGTGTCTT
CATTCGTTGGAAAGTTATGAGCGACGATGCAAACGGGTCTCAGCGCGAAA
TAAAATCACCATGCGGTCCTTCGATGTATGTACACTCTCTAACCGACCCT
TCAACCAACAACCTCAAAAAGAATCACCAAAATCTGACCAACTGTAGAAA
CGTCGGATCGGCAGCTTTCGGTGGAAAAAAGCCAGTTCGGATTCAGTTGA
TTTTCGAACGGATTTTCCGGGCTTACAAGAAAACGCCACATACGGCTGTC
GTTTTGTTTCGTTTTCCTGCAGGTTCAAGAAAAACTAGCTTTTCCAAGAC
TGCGGAGCTGTAACTTCTCAACTTCGGAGTCTGACGTTTCCCTGTTTCTC
TCCCTGTTTACTTATCAACACTCGGTCTGCCTGTCTGTCTGTATGCATCT
CCCTCTACCTTTCTCTTCCTGCTCTCTCTCTTTCTATGTCCCTGCCACTC
GTTCTCAACACCTGTGTAAAACTATATCATAGGTGCTCGTTTTCCTGCGA
GAAAAGCGCTCCGAAGGCGCAACGCCAGCAGCTGTCGACTCCGCGGCCCT
CAACGGCCACCTCCGCGTCGTCGAGTGGCTTACCGTTAACATGCCGGCTC
TGGCTGCCACCACCGCGGCGATGGACGGGGCCGCATACGCCGGCCACTTG
GATGTCGTGAGGTTTCTACATGGGGCCCGCAGCGAAGGGTGCACGACCGA
AGCCATGGATTTAGCGGCAAGGAGAGGTCACCTCGAGGTGTGTGTCTGTG
TGTGTGTCTGTGTCTGTGCCTGTGTGTGTTTTTGTGTGTGTCTGTGTGTG
TCTGTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTG
TGTCTGTGCCTGTGTGTCTGTGCCTGTGTCTGTGTGTTTGTGTCTGTGTC
GGTGTCTGTGTGAGTGTGAGTGGTCCCAGGCGCGTAGCGCGTGCGGTGCT
GCATGGTGATAGATTTACGCTGCAGACCAGCGTGTAGAACGTTTGCCGTG
CACAGGCTAGGAGATGGGAAATTGGGGTGTATCGGAGTGTGCGTGATGCC
AGCCGTGCACCTCGTGCGACGTGAAAACCGACATTGCGGTGCACACACAG
TAGCAATACCCAAGACGTTTGTTTGCTGTGAGCACTGCCCCTTTTTCGGC
CCGTCAGTGTTTGAATGCATAATTCCGACTTTGCAAGTGTGACGCGGGTC
GGGAATGCTGACACCGCCACCAACAACGACAGAAACAACAACGACCTGTC
AGGACGATGTCTCTGGACTGCTGTTCCATTAATTGATACCCAGGTCCTAC
AGTTCTTGCATGAAAACCGCCGAGAGGGCTGCACGACCGACGCCGTGGAC
AACGCGGCATCGGGCGCCCACCTCGATATTTTGAAGTTTCTGACATCCAA
CCGCGCCGAAGGGGGCACCGTGTACGCCATGACCTTGGCGGCCTGGCATG
GCCACCTCGACGTCGTGAAGTGGTTGCACGACAATCGCGACGAGGTGAGA
TTTACCTGCAGTCACGTGTAGGCTGTCAACGCCCTTTTCCCAACACGCTT
CGTATAAAAGGCGTCGTAACGTCTGGCAAGAATCTGAGCTCCCGGCGTGT
ATATTACTGGTGAAACAGATTTATCTGCTAGACCACTCCATTTAAGCTAT
TACCTCTCACACACGTAGGTACCTAGTCCCCCCCATACCCGATTTTCGAA
GCTCGACATCTCTCAGCCTGAAAGAGTGTCGGTGCTGGCTGTATCGAAGA
GGGCGATCGATCGGCATCGAAATCGTGGAACCATAGCATCGAGACAGAGC
TTTCCGAAAGCGTGCAGCAGGCACGGGATGCACGGTTTCGATGTGGACAC
GCTCTTTTTCGTGGTGGAAACCCAGAAAATCGAGCTTTGAAAATCGGTCC
AGGAGAGGTGGTATAGTGTTTGTGTGTGTGTGCGTGCGTGCGTGCGTGCG
TGTGTGTTCTCCCCTCATCTATTCTGGACGCCAGCGCACACCTCTCGGTG
TGTATGATACGTCGGCGCACCAGCCAGGGGCACCACAGACCAGAAACGGG
ATATTTTGTTTTCACTCGCACTTTCCTTCTGCGGGGCTTGATACGCACGG
CAACAAACCACGGACCCTCATGAACGAAGAGTTTGACGCATGTCTATTAT
GGTTTCCGCGGGTGCTTTCCCGGGGTGGGATATAGCAGTACTCCCTTATT
TCTGGACTTCGTCGACGTGCTGTATCGATGTGTCGCTTGCGAGGGTAGAC
CTATGTTCAGTGCCAGTGGAATGGGCAGAAAAGAACGCTCTCCTGCTGTG
AGTTTTTCGGCTACACACGTACAAGAGGAGGGACTGCTGAACCCTTCGTG
CATTGGCAATGAAGGCAGCATTCCTCAGAAGGAAGAGGGAGGAAGGAAGG
AAGGAAGGAAGGAAGGAAGGAAGGCAGAAAGGAAGGAGGGAAAGAAATAA
AGGGGGTTCCCAGGGGAAAAAAGCCTTCTGTTTGGCCCTTGAGGATAAAC
ACTCCTGAGTGGAAACCCGCGAGAGCCGGTTGTAAATACTTAATAGGATG
CAACGAAACAAAACAAGAGGAGCATTCCTGCCGCGGTCGCTGGACCAGAT
AGATTCTGCTTGTTCACCAGATACCACACCCCCTGGACCGCCAATTGCTC
CGTACGAAATGGGATGCCAACACCAAACAATGCGTTTTCGAACAGCTCCA
GGTAGGACAATTTCAACACCACCATTGGAGCAATGAAGCTTCCAAATTGT
ACCTTACGTCACCTGCGGTACTTAAAGTACCAAGTATGTGTTTATACGTA
TGGAGTCCAGACTGCTTGCTGTAAGCGTCGTCTTCAACTCACTCACGGCC
AGAAAAGGCTTTGACAAGACCGCATGCTGCATGAGTGTGCAGCTTTTTGT
TGCAAAGGCAACACTTGTTGTAAAAAACCGTATTGGTACAGCAGTAGTAC
CTCACCCGTCGCTCCTCGTCCCCTTGTGCGGACTCTGTTTGTGCACGCCG
CGCTCCTTTTGTGCTGCCTGTCAGGGTTGCACCACGAGTGCCATGAACGG
GGCAGCTTACAACTCGCACCTCGAGGTGGTAAGGTGGCTCCACGAGAACA
GGACCGAGGTAGGAGAAAAACTGACAGAGACAACCTCACGGAAAACCTTC
CTGTTTTTGTTTGAAAGAGTATCCCACAGTCAGTACGTCTTTGCGAAGAT
ATCCTCGTGGTCTATATACAGAGCATGCTTTGTGTTCGTTGCTATGCTCA
TCGATACTAGATCGTCGTCGAGAGAGAGAGACGACTCCACTTACAGCTTG
CATAACGTGTTCGTAAGAAAAACAAGGGAAGACATCCCCGTCCCGTATTA
AGATCAGACAGGGCTCTTTTAAGACCTTGGCATGCCAAACGTATGAGAAA
ATACTGAATCGTCTGATACTCAGCCAGAGACCACATGAAAACACAGGGAA
CAGAAACGAGCAGAAACGAAGCTGTCCTATCATACACTACAAACCAGTTT
TTCTAAAGCTCATCGCATTCCGGATTTTTATTGTCTTGCGTAGATTGGCG
CAAACTCTGTTGGCCGCATGTCGCGACGGTGTGGCCAAAGTGGTAAGACA
AATGCCAAAACAAAACTCGCGTTTATCGACGGTACCTCGTGATCAAGAAG
AAAACCCATGTGCGCCTACTTTCACAGCGTATCTTGCTTGGCGGCGACCC
TGTGGAAAGTTGAAAGCGAAGCGAAGTAGTAGTGTGTGTGCCGTGGCGAG
AAGAATGTGTTGTCTGGATCATACAATTTGTATTCATGCACTTCTTACAG
AAATAGGGGATCGTCCTAGACAGGCGTTGGGGAGACGTTACCTTCATTTA
TTAATCGTCCTGGACGACGTTGGGGAGATGTCACCTTTATTAAGGTCACC
TCCACACTTCATACACCCCCCCTTTTTTGAGTAATTTTCTTGTTTGCAAT
ACGACGAGGAATGCAAAGCTTGACCGAGGGTGAGGTCAAAAAGCCGTCGA
CTATTCCGCCGACCTGAACGCTCCCGTCGGCAGTCAACAGGAATTGGTGC
AATTCTCGTGCACAGCAGGTCTAGATACAGTCAAATCAAATTGCCCGAGG
GTCTCCTTGATATCTTCACGTTTGTGTGTGCGTCTATACCGACAGGAAGA
TTTGATACTTTGGCATCCATACACTGAAAAACAAAATCTGTACAGTGTGA
CTTTCCTGTCCTGTCTGTGTGACCCCGGCTGATGCTGCGCCAGAACGTAC
CGCAAGGTGTGGGCTGGCGTCCAGAAAATATGGAGACAAAAACATTCACA
CGCACACACAAATACACACACACAAACACAAAAGCACACATGCACACACA
CAATCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCCCAACCA
ATCCTATTTGATTCCCACATGCGATGTTATTTTTTTTCCTTCAGGGGTGC
ACGAAGTCGGCCATGGACGCGAGCGCCATGCACGGCCACCTGGAAGTGGT
CAAGTGGTTGTCGGAGCACCGCTCGGAAGGCTGCTCGACGAACGCGATGG
ACTGGGCGGCTAAGGAGGGAAAACTGGTGCGTGCTTTTACATATGATACG
ACGCAGCAGGTCGAACAAGATGCACCGGGAATAAACACCACACCCGGTGG
AAACCATGTTTAAAAGCTCGTGAGCTCCACAGCAGAAAGAACGGAGTACC
CGTAGAAAGGGTGACTGGTTGGCGTTGGAATCTACCGTCTCGGCGAGGGT
GTTTTTTCCCGACAATACGGGGTTGCTTGGTGTTGACTGGTACCCTTTTT
GTCGCGAGGTAATGTGTGTGTGTTTGAAATGAAAAGAGGCGTCTGTGTGT
GTTGTCATCCCATCTATTCTGGACGCCAGTTCACACCTTTCGGCATCCTA
TACGTTGGGCCCACCAACCATGGTCAGTCACACAGATGCATTTTTTTGTG
AATCGAGTTTTTTTTTTGAAAATCGATCCAGGGGCCGTGTGGCATATTTT
GCGCAACTTGAGATACAGCATGCGTGTTGATCAAAGCGTCGTGGAAAGGC
GAAAAAAAACAAAACAAAAACAAAAACGAAAACAAAGAACAAAAACACTC
GATATGTACGGCAGTAGCACACAGATAGGTGCACCGGGCAGCAGGTGGAC
GGGGCGCCACCCCTCTCTTTTGCCGACGCGTCCGATGCCCGCACCGCTTT
TTGTCGAAACCTTGCACTATACTGTGAGGGAAAATGCTCGAACTGCAGTA
CAACTGTAGCGTAGGAACAGCCCAGCGGATTCGTGAAGATGTGAGCAGCA
ACCACACGCGGCTTTCTATACGCTGCGAGTGCTACTGCTGTCTGTGTAGT
GCCGGAGGCAAACTTTGCCTCTCTCTCGTCGCGAGAGGTGAGCCCCGCGT
GTGCTCCACGCAACACACCTACCGAAGAGAACCGCCCGTAGCGCAGAACC
TGGAACACCCGAGTTCCATACTGGTGTCAGCGGCAGTTCAGTTATTTCTG
CTTATTAAATGCCATACTCCTCCTGGCTGAGATATAAAGGAAAACGATAC
AACGAGCAACCACGTGGTTAGGGTCGTTGTAAACATCACGTGGTTTGTCC
ATATTTACGGAAATTTCCATATATGTGGAAATTCCGAGGAGGCGTTTGTC
CATATTTTGTCCACAGAAGTTAATGTTGAACCGGCTCGGGCCCCAAAAAG
TGGCCCAAGTCCAGAAACCGACTGGAAAGATTTCAGTGTTTTCCATACTT
TCAAACCAGTGTCCAAATCAGTGGCACACACAGCAGCAGCAGCACGCCGT
GAGACCTACACGTAATGGCGAGCTCGGAGGGGCATCGAAGCAGCCGTAGA
GCCACCGAGTCACGAGTTCGGCCGCTGGTTAGTGGCCGGAGTTGGACAGG
CGTGCGAAAACAATTATTTGATTGAGAGTATGATATGATAGCCCTTCTTT
CATTTTTGAACGCACACGAATGATGATGAGGTGCGGGAGAACAACATCCA
GCCAATACATATGCATGGCAACACCGCAGCAGCAGCAGTCAGTTCTTGTT
ACCCACCAGTACACCTCTCAACGCGAGACTTCGTGGGTGTTACCTCATTT
TGCTGCTCTCCATCAGCAGGGCGTTGAGTCAGAGGTAGGATCATTAAACC
GACAGACTGCATCAGCATCGCGGTGTACCGGATGTGTCATGCTGCTGCTG
CTGCTGCTGTACCCCTGGAATAACGTTTTCAGACGGTAGAACAAGCGGTC
TATTTTCAAGTGCTTCGAAGTACCAGGTACCAAAAAGTGGTCATATTGGT
CTGTCGGTTGATATTTCCAGATATTTCCAACAGCGAGCGACGCCTCTCTC
TGTCGATTGAATGACCCCGCCTCCAACCCAACGCCCCACCGACAGAGAAC
AGTGAACGGAAGTGACCGGCAAGAAGGTTTCACGATGAGAGGTGGTGAAG
GGAACGAGAAGATAACGGTGGTGTTGTTGTGTCTGTCCTTCAAAAAACTT
GGATGTGTTCGGTTGATCGCACGTTCGTCACCTCTCATCCCTTTTACGAA
GTCTCTTTCGACCACATTTCCGTTGATGTGGAATAGACTTTTACACGTTT
ATGAGCTTGCTAGATTCCATAAGAATGGATCCATATTTATTTATGGAAAT
TTTCCATATTTCTGGAACATGTTTAAAACGACCCTTATACGATACGTGGA
TTGATTGCAGCACCCCCCCCTCTGACTCCATCCGATGCATGCTTGCTTCG
ATTTGGAGCTGCGTTCCAGTCCTGCACGATATCGTCACTACGCGCTACGG
TACGGGGTACAAGATGAAATCTTGATAAATTTTCACGGACACAAACAACA
AGGCCGTGGACTATTTTCGGTCCAGAGCAATTTCATATTCTCCGGCCGTG
TGCATACTATCGCGTCTTTTGTTGACAATCAAAGTGATGAGGACAAATTC
AGCGTGGTCGCTAACATCGCGTTTACCAATTGCTTCCGCCCTGGAAAAAA
GTAGAAGATACCGTAGATTCTGTTTGAGATCAGCTTTTCCGCGAGACCAG
TCAATCAGCTCTTCGGCAGCTGAACAGCTGACTGTCCATCTAGTCAGCAA
TGCCTTATCGAGGCACAGCGCAGTCGAACAATATCTGCCATGATGTGCTA
GTTTTGACGTGCGTTTGCGTGTACGTGGGTAGGTTTGGCTGTTGCGATAT
ATTCAACGAAGTATGGCGCGCGCGTTGGAACTTTGATATTTTTTTCTTGC
ACCTGAATGCTTGCTTGGGGTAGAAAGTCTTGTCGGATGAGCTACCTGTA
GCAGTGTGGACGTTGGGAGCGGCTGAGCAGAGATAGGAACGCTTTTTGTA
AGTATGCGAAGACAAGACCCGCATGATACGCCGCAATGTCACAACTCCGC
ACAAGACAAGAACGGCTCCCCCAAAAGAAATCCAGCGCGAGCCAGTGATT
TTATTTCACGGTTTCTTGGGTGTACTGGAACGATCTTCACTGTACGACCC
CCCCCGACCATGAAACTCTCCTCGCCGTGTGCATCGTCTCACAGGAGGCC
CTCCAGTGGCTGCACAGAAACCGGTCGGAGGGGTGCACGCAGGCGGCCGG
TGACTGGGCAGCCGGCAACGGCCACGCGAGCGTCCTTCGCTGGCTTCTTT
CCAAGCGGCGGGTCGGCTACAGCGCTCGAGCGGTCAACTGGGCCGCCAAG
AACGGTCACCCGGAGATCGTCACCCTCCTAGAGGAGTTTAGATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig178:176558..186902-

>mRNA_P-littoralis_Contig178.31.1 ID=mRNA_P-littoralis_Contig178.31.1|Name=mRNA_P-littoralis_Contig178.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1557bp|location=Sequence derived from alignment at P-littoralis_Contig178:176558..186902- (Pylaiella littoralis U1_48)
CCCCTTGGAGACGCACGCATCAGGAAGCTCTCTCGTGCATCCGCGTCGGT
TTTGCTGGGAACAGCAGCAGCAGCACCGCGGTTTTCCGCTGGATGTGACG
ACGACGATGACGTCGGCTTCCTGGGTGGGACGAAGTTCGCTCGGAGGCCA
CGAAGGTCGTACAGCTGCCCTTCCACACGCAGTCGTAAAACAGCAAAGGT
TGCACCAGACACGGGCCGGCTTTCTGCATCTCCCCGCACTCCTACTATTA
CACCTACGAGTAGTAGTACTCTCTCCAGCAGCAGCAGCAGTAGCAGCAGC
AGCAGCATCAATAGTGGTATCTTGCCCTTGCTCTTCGAAAATGCAGTGTA
CAACCTCAGTGGCGTAATCGCCGCGTTCCAGCAGGGCCTCCGCACCTGCG
ACTATAAGGACGGGGACCTGGCCGCAAGGAACGGTCATATGCACATCGTG
ACGAAGGTGGCGGCCGAGTTTTCTGACCAGGCGATGGTGCTCGCGGCGGG
ACAAGGGCACCTCGACATGGTGATTTATCTCCACCACAACCGGAGGGAGG
GGGCTACCGCCGAAGCAATGGACCTCGCGGCGACCTTCGGGCATCTCGAC
GTGGTGAAATTTTTGCACGAGAACCGCAGGGAGGGAGCAACCACAAGAGC
AATGGACGGGGCAGCGCGTAACGACCACTTAGACGTGCTCGTTTTCCTGC
GAGAAAAGCGCTCCGAAGGCGCAACGCCAGCAGCTGTCGACTCCGCGGCC
CTCAACGGCCACCTCCGCGTCGTCGAGTGGCTTACCGTTAACATGCCGGC
TCTGGCTGCCACCACCGCGGCGATGGACGGGGCCGCATACGCCGGCCACT
TGGATGTCGTGAGGTTTCTACATGGGGCCCGCAGCGAAGGGTGCACGACC
GAAGCCATGGATTTAGCGGCAAGGAGAGGTCACCTCGAGGTCCTACAGTT
CTTGCATGAAAACCGCCGAGAGGGCTGCACGACCGACGCCGTGGACAACG
CGGCATCGGGCGCCCACCTCGATATTTTGAAGTTTCTGACATCCAACCGC
GCCGAAGGGGGCACCGTGTACGCCATGACCTTGGCGGCCTGGCATGGCCA
CCTCGACGTCGTGAAGTGGTTGCACGACAATCGCGACGAGGGTTGCACCA
CGAGTGCCATGAACGGGGCAGCTTACAACTCGCACCTCGAGGTGGTAAGG
TGGCTCCACGAGAACAGGACCGAGGGGTGCACGAAGTCGGCCATGGACGC
GAGCGCCATGCACGGCCACCTGGAAGTGGTCAAGTGGTTGTCGGAGCACC
GCTCGGAAGGCTGCTCGACGAACGCGATGGACTGGGCGGCTAAGGAGGGA
AAACTGGAGGCCCTCCAGTGGCTGCACAGAAACCGGTCGGAGGGGTGCAC
GCAGGCGGCCGGTGACTGGGCAGCCGGCAACGGCCACGCGAGCGTCCTTC
GCTGGCTTCTTTCCAAGCGGCGGGTCGGCTACAGCGCTCGAGCGGTCAAC
TGGGCCGCCAAGAACGGTCACCCGGAGATCGTCACCCTCCTAGAGGAGTT
TAGATGA
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