mRNA_P-littoralis_Contig178.20.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig178.20.1
Unique NamemRNA_P-littoralis_Contig178.20.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 5.260e-125
Identity = 207/221 (93.67%), Postives = 214/221 (96.83%), Query Frame = 1
Query:    1 ITVKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMFTE 663
            ITVK+F YTDNIRYTALY LF YFWTSEFIVAMGQ+VVAMAVASWYFCRDKS IGSGTVLS++KTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNI+RVMAVGVVSEVVLILGKVMIPLVSTVLFYV  EATISD+LHG+VAISVLVFIVAFFVA MFTE
Sbjct:  343 ITVKQFKYTDNIRYTALYFLFAYFWTSEFIVAMGQIVVAMAVASWYFCRDKSTIGSGTVLSSVKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNIMRVMAVGVVSEVVLILGKVMIPLVSTVLFYVCAEATISDELHGMVAISVLVFIVAFFVANMFTE 563          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.660e-89
Identity = 147/221 (66.52%), Postives = 191/221 (86.43%), Query Frame = 1
Query:    4 TVKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMFTEV 666
            TVK F+Y+DN RY  LYL+F YFWTSE+I+A+GQ+VVAM+VA+WYF R+K +IGS TVL +I ++L+YH+GTAAFGSL+IAIIKTIR ++AY+QKK KD+HNK+L A+LCC XXXXXXXEKCMKFLNKNAYIQTAIFGYSFC AA+KAFFLIARNILRV AVG+VSE+V ILG +++PL S + +Y+  +  ++D++HG++  +++V I+AF VA MFT+V
Sbjct:  374 TVKAFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQV 594          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A7S2V489_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V489_9STRA)

HSP 1 Score: 272 bits (695), Expect = 4.030e-87
Identity = 143/220 (65.00%), Postives = 187/220 (85.00%), Query Frame = 1
Query:    7 VKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMFTEV 666
            VK+F YTD++RY AL+LLF++FWTS+FI+A+GQ+VVAMAV+ WYF ++KS+IGS TV  +IK S++YHSGT AFGSLIIAIIKTIRA+V+YIQKK   + NKI  A+LCC+ XXXXX EKCMKFLNKNAYIQTAI+GYSFC AA+KAFFLIARNILR+ AV +V   VL +GK++I L++T L ++V+++T+SD+LHG+ A ++  FI+A+FV+ MF EV
Sbjct:  115 VKKFEYTDSMRYAALFLLFSWFWTSQFIIALGQLVVAMAVSMWYFTKNKSSIGSSTVFKSIKMSMWYHSGTCAFGSLIIAIIKTIRAVVSYIQKKAAKSGNKIAVALLCCIQXXXXXIEKCMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRITAVALVGNYVLFIGKMVITLLATFLAFLVMDSTMSDKLHGLYAPTIFTFILAYFVSLMFVEV 334          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK)

HSP 1 Score: 275 bits (703), Expect = 1.860e-85
Identity = 153/221 (69.23%), Postives = 182/221 (82.35%), Query Frame = 1
Query:    4 TVKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMFTEV 666
            T+K FTY DNIRY  LYLLF +FWTS+FI+AMGQVVVAMA++ WYF  D+S IG+GTVL AI+ S++YH GTAAFGSLIIAIIKTIRAI+AY+QKK K + NKILQAVLC  XXXXXXX KCMKFLNKNAYIQTAIFG SFC+AAK AFFLIARNILR+ AV +V + VL+LGK++IP+ +T L Y+V+    SD LHG+    V VF++A+FVA MF EV
Sbjct:  378 TIKTFTYDDNIRYAGLYLLFCWFWTSQFIIAMGQVVVAMAISFWYFTLDRSKIGNGTVLKAIRQSMWYHMGTAAFGSLIIAIIKTIRAIIAYLQKKAKKSGNKILQAVLCXXXXXXXXXXKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSMVGDFVLLLGKILIPVGTTFLAYLVLAYAYSDSLHGLYTPCVFVFLLAYFVALMFVEV 598          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.660e-78
Identity = 136/220 (61.82%), Postives = 182/220 (82.73%), Query Frame = 1
Query:    7 VKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMFTEV 666
            VK+F YTDN+RY AL+LLF++FWTS+F+VA+GQ+VVAMAV+ WYF ++K +IG+ TV  AI+ S++YHSGT AFGSLIIAIIKTIRA+++Y+QKK   + NK+ QAVLCC+ XXXXXX   MKFLNKNAYIQTAI+GYSFC AA+KAFFLIARNILRV+AV +V   +L +GK++I +V+T L ++V+++ + D+LHG+    +  F++A+FVA MF EV
Sbjct:  349 VKQFQYTDNMRYAALFLLFSWFWTSQFVVALGQLVVAMAVSMWYFTKEKGSIGNLTVFKAIRVSMWYHSGTCAFGSLIIAIIKTIRAVISYLQKKAAQSGNKLAQAVLCCIQXXXXXXXXXMKFLNKNAYIQTAIYGYSFCKAARKAFFLIARNILRVVAVALVGNYILFIGKLVITVVTTFLAFLVLDS-MEDELHGLYGPIIFTFLLAYFVALMFVEV 567          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK)

HSP 1 Score: 238 bits (608), Expect = 3.830e-71
Identity = 127/220 (57.73%), Postives = 164/220 (74.55%), Query Frame = 1
Query:    7 VKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMFTEV 666
            +K FTY+DNIRY  LYLLF +FWTSEF++AMGQ+VVAMAV+ WYF  D+S+IG              H+GTAAFGSLIIAIIKTIRA++AY+QKK K + NK+ Q VLC +       EKCMKFLNKNAYIQTAIFG SFC+AAK AFFLIARNILR+ AV +V + VL++G+++IP+ +T L Y+ +  + +D  +G+ A  + VF++A+ VA MF EV
Sbjct:  420 IKTFTYSDNIRYAGLYLLFCWFWTSEFVIAMGQIVVAMAVSFWYFTMDRSSIGXXXXXXXXXXXXXXHTGTAAFGSLIIAIIKTIRAVIAYMQKKAKQSGNKLAQIVLCVIQCCMWCLEKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSLVGDFVLLIGRILIPVATTFLAYLALAYSSADY-NGLWAPIIFVFLLAYSVALMFVEV 638          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A812RYG8_SYMMI (Choline transporter-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RYG8_SYMMI)

HSP 1 Score: 227 bits (579), Expect = 9.130e-69
Identity = 122/220 (55.45%), Postives = 162/220 (73.64%), Query Frame = 1
Query:   10 KEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQ-LHGIVAISVLVFIVAFFVATMFTEV 666
            K   Y  N R   LYLLF +FWTSEFI+A+GQ+  AMA+++WYF RDK + G+GTV+ A +T+ FYH GTAAFGSLIIAIIKTIRAI+AY+QKK K + N++   VL  +       EKCM+FLNKNAYIQTAI+GYSFC A + AFFLIARN+LRV+AV  V + VL LGK+ +PL++T L Y+ +   I  + ++G+V   V+VFI+++F+  +F EV
Sbjct:  217 KTMEYDQNTRLAFLYLLFCWFWTSEFILAVGQITSAMAISAWYFTRDKKSEGNGTVIWAFRTTCFYHLGTAAFGSLIIAIIKTIRAILAYLQKKAKKSGNQLALCVLRMLQCCMWCVEKCMRFLNKNAYIQTAIYGYSFCKACRSAFFLIARNVLRVIAVSYVGDFVLFLGKLFVPLLTTFLCYLALGYAIGGKNVNGLVGPLVVVFILSYFIVNIFVEV 436          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: B8C577_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C577_THAPS)

HSP 1 Score: 218 bits (555), Expect = 3.550e-67
Identity = 119/219 (54.34%), Postives = 165/219 (75.34%), Query Frame = 1
Query:    1 ITVKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMF 657
            I+V+ F +++ ++    YLLF +FWTS+FI+AMG+++ AM+V+ WYF RDKS IGS TV ++I TS++YHSGTAAFGSLIIAIIK IR+ +AY+Q+K ++  + I +AVLCC  XXXXX EKCM+FLNKNAYIQTAIFG SFCT+AK+AFFLI RN  R+ A+  VS  V+ +GKV I  ++T   YV ++  I D+L+ I+     +  +++F+A MF
Sbjct:   76 ISVRTFEFSNFVKQCGWYLLFCFFWTSQFILAMGEIIFAMSVSKWYFSRDKSNIGSATVWTSIATSMWYHSGTAAFGSLIIAIIKMIRSFLAYLQRKAEEMDSSIAKAVLCCFQXXXXXLEKCMRFLNKNAYIQTAIFGSSFCTSAKEAFFLILRNAARIAAITYVSGGVMFIGKVFITSLTTGAAYVYMDQEIGDELYSIIGPLFFIAAISWFIAGMF 294          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A7S2XXR1_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 8.070e-65
Identity = 121/216 (56.02%), Postives = 161/216 (74.54%), Query Frame = 1
Query:   10 KEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHGIVAISVLVFIVAFFVATMF 657
            K++ Y+  +     YLLF +FWT++FI+A+GQ+V+A AVA WYF RDK  +G+ TV  AIK SLFYH GTAAFGSL+IAIIK IR I+  +QK+ +    K+ QAVLC  XXXXX  EKCMKF+N++AYIQTAIF  SFC +AK  FFL+ RNI R  AV +VSE+++++GK+ I L++T L Y  +EA ISD L+ +VA +V+VFI+A+ VA MF
Sbjct:  345 KDYVYSAEVEERGWYLLFMWFWTTQFIIALGQIVLAAAVAKWYFTRDKKEVGTRTVFWAIKVSLFYHVGTAAFGSLVIAIIKMIRFILMQMQKQAQXXXXKLAQAVLCXXXXXXXCVEKCMKFVNRHAYIQTAIFSTSFCVSAKNGFFLLLRNIARASAVELVSEIIILIGKIFISLMATFLSYATMEAVISDDLNSLVAPTVMVFILAWVVAIMF 560          
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Match: A0A8J2WZ97_9STRA (Choline transporter-like protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ97_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.690e-64
Identity = 126/224 (56.25%), Postives = 163/224 (72.77%), Query Frame = 1
Query:   10 KEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRDKSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHN----KILQAVLCCVXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEAT-ISDQLHGIVAISVLVFIVAFFVATMFTEV 666
            ++  Y +       Y++F YFW+SEFI+A+GQ+++A+AV++WYF RDK  IG+ TV+ + +   +YH GTAAFGSLIIAIIKTIRA++ YIQKK K+  N    KI  AVLCC+  XXXX EKCMKF+NKNAYIQTAIFGY FC AAK AFFLI RNI R+MA+ +VS  VL+LGK++I   +T L YV +  T +SD+L+ I    V   I+AF+VA MF EV
Sbjct:  428 RQMVYDETTFKAGWYMIFVYFWSSEFIIALGQIILALAVSTWYFTRDKGKIGNSTVIWSFRQGAWYHWGTAAFGSLIIAIIKTIRAMIKYIQKKCKNIKNPVAKKIAMAVLCCIDCXXXXIEKCMKFINKNAYIQTAIFGYHFCKAAKCAFFLILRNIARIMALSIVSGFVLLLGKLVITAGATFLCYVCLAYTPVSDELNYIWLPLVFTAIIAFYVAAMFNEV 651          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF7_ECTSI5.260e-12593.67Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z9G9_9STRA2.660e-8966.52Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A7S2V489_9STRA4.030e-8765.00Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A7S3Y650_HETAK1.860e-8569.23Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S2Y2B5_9STRA3.660e-7861.82Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A7S3Y6D2_HETAK3.830e-7157.73Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A812RYG8_SYMMI9.130e-6955.45Choline transporter-like protein n=1 Tax=Symbiodin... [more]
B8C577_THAPS3.550e-6754.34Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A7S2XXR1_9STRA8.070e-6556.02Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A8J2WZ97_9STRA3.690e-6456.25Choline transporter-like protein n=1 Tax=Pelagomon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:127646..130025 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSF7
PFAMsCholine_transpo
Model size666
Max annot lvl2759|Eukaryota
KEGG koko:K06515,ko:K15377
KEGG TC2.A.92.1,2.A.92.1.1
KEGG Pathwayko05231,map05231
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.63e-126
EggNOG OGsKOG1362@1|root,KOG1362@2759|Eukaryota
Descriptioncholine transmembrane transporter activity
Cds size666
COG categoryH
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789854.2134366-CDS-P-littoralis_Contig178:127645..1277861680789854.2134366-CDS-P-littoralis_Contig178:127645..127786Pylaiella littoralis U1_48CDSP-littoralis_Contig178 127646..127786 -
1680789854.230369-CDS-P-littoralis_Contig178:128390..1285941680789854.230369-CDS-P-littoralis_Contig178:128390..128594Pylaiella littoralis U1_48CDSP-littoralis_Contig178 128391..128594 -
1680789854.241763-CDS-P-littoralis_Contig178:129128..1293441680789854.241763-CDS-P-littoralis_Contig178:129128..129344Pylaiella littoralis U1_48CDSP-littoralis_Contig178 129129..129344 -
1680789854.254373-CDS-P-littoralis_Contig178:129920..1300251680789854.254373-CDS-P-littoralis_Contig178:129920..130025Pylaiella littoralis U1_48CDSP-littoralis_Contig178 129921..130025 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.20.1prot_P-littoralis_Contig178.20.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig178 127646..130025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig178.20.1

>prot_P-littoralis_Contig178.20.1 ID=prot_P-littoralis_Contig178.20.1|Name=mRNA_P-littoralis_Contig178.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=222bp
ITVKEFTYTDNIRYTALYLLFTYFWTSEFIVAMGQVVVAMAVASWYFCRD
KSAIGSGTVLSAIKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKD
THNKILQAVLCCVQCCLWCLEKCMKFLNKNAYIQTAIFGYSFCTAAKKAF
FLIARNILRVMAVGVVSEVVLILGKVMIPLVSTVLFYVVVEATISDQLHG
IVAISVLVFIVAFFVATMFTEV
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mRNA from alignment at P-littoralis_Contig178:127646..130025-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig178.20.1 ID=mRNA_P-littoralis_Contig178.20.1|Name=mRNA_P-littoralis_Contig178.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2380bp|location=Sequence derived from alignment at P-littoralis_Contig178:127646..130025- (Pylaiella littoralis U1_48)
ATCACGGTGAAGGAATTCACCTACACGGATAACATACGCTACACCGCGCT GTACCTCCTCTTCACCTATTTCTGGACGAGCGAGTTCATCGTCGCTATGG GTCAGGTATGTGCTGCTGTTGCTGATAGAGAGCCGTTGTTGCCTTTGCTC TTGTTATCGGTGCTGCTGTTGGTGGTGTCGTTCCTTTCTTCGGTTATTTT TATCGTCATCGTCGCCGTGGTGGTTTAGTCTTCGTTGTTGGTGATGCTGC TGCTGCTACTGCTGTACTGCCGTTTTGGTCATTTTCCCAAATCAAACGCC TTTTCGACCTACACAAGCATTGATAATCAATATTCCATGCTGCTCCGACG GGTGAGCGAAGGCTCCGGTGGAGAGAAAAAATAATGGAGCGGATTCATGC TTGTTTGCCTGGTGGTGCTGGCTCGATCGATATTTGCTATTGTTGTTGAA ATGACTGATTTTCCACCATCATATGATATGTTGTGTGCGTGTGAGTGCGT TGTCTTCCCATCTGTTCTGGGCGCCAGTCTACACCTTTCGGCATAAGCAG GGCGACCCAGCCGCGCTAACACGGGAGGAAGGTCGACACAAGAGCCTTTT GTTTTCTCCACCTGGCTTCTTCTGCGGTTCTCGCTTTCATATTTTGTACG GTACTGCTTTTCAAACGATGACCCCCTTAAGGTTGTCGTAGCGATGGCCG TGGCGTCGTGGTACTTCTGCCGCGACAAGAGCGCGATCGGAAGCGGAACG GTGCTGTCCGCGATAAAGACCTCCCTCTTTTACCACTCCGGTACCGCAGC CTTCGGATCGCTCATCATCGCCATCATCAAGACCATCCGCGCCATCGTGG CGTACATCCAGAAGAAGACCAAGGACACGCACAACAAGATCCTTCAGGTG ACTGTCAATACGCAACATCGTTAAAATTTTGTTTTTTGTCTTGGAAATAG GTGAATTTGACCTAAGAGATTGCTATCGTACAGACCATCAGAACATTCCT CCGACACGTGCGCTTAGACCAACGCGGTGTCGTGACGTACCATACATACA TACATACATACATACATACATACATACATACATACATACATACATGCATA CATACGTGCATACATTCATACATACGCACGTGTATACATTCATACATACA TGCATCTACACATACCATAAACAAATACATACACATGATACAAACTTACA TACATGCACGTGTATTCTTCCAAGTACATACAACATACATACAACATTCA TACATAACTTACACACAGAAAACACCACGGACGCGCACAGATCAATCCTT ATCCTTCAGGCACAACAATCGGTTGGAGAGTTTGATTTGACGCAAAAATG CCTACAACTTTGTCTGAAAACCACATCGTGATACTAAACGAGAGCCCTCT CTCCCCGCCTTCCGTGGCTATTTCTTGTCAGGCGGTGCTGTGCTGCGTGC AGTGCTGCCTCTGGTGTCTGGAGAAGTGCATGAAGTTCCTCAACAAGAAC GCCTACATACAGACGGCCATTTTCGGTTACAGCTTCTGCACGGCCGCGAA AAAAGCCTTCTTCCTGATCGCGCGGAACATTCTTCGGGTCATGGCGGTCG GGGTCGTGTCCGAGGTCGTCTTGATCCTGGGAAAGGTGACGTTGTGGTCC AGCGGCGCGCGTGCTGTCCGCGTAGGTGGTGTACATGGGGCTTTGTTCAC TACGCGCTGAGGCTGGTTTCATGGTGTCTACGAAAACGTGAAGACGAAAG CACTCTCGAACAGCAGCAGAAACGGCAACAACTAATTATGGTGGTACCGC GCCGGCATCAACAACATCAACAGTACCAGCAACACCAACGGCAACGGCAA CGGCGTTTTTTCAAACTGTAGTGGGTCAAGATAAATTCCAAACCAAGAAA CGATTTAACTCGTTGCTTTTGCCGCAAAAATGTGCGTCTGTGCGAAATGA TATCCGAAACGATGTATCAAACCAAATCGACTGGACCGATGCGTAACTAC CTCTCTGTAAAATTACGAACGTGAGACGAGGAGGGGGGATGCTCAGGCAA TCTGCTCCGAGCAGGTCAAATCCGTGCTTATCCCTTTCATGGACGAGATG AAGGTGGGATAGAAGATAGGCATAACACTGATCCAGACGCTTGAGAACAC TTCACACATCAACGTAGCAGAAGTTGTGAGTTCAGCTCATCAAACTCCTG ACCCATCCGTCCTCTCGAAAAACATGTCATCTTTACAAGGTGATGATACC CCTAGTTTCGACGGTGCTCTTCTATGTCGTCGTGGAGGCGACTATCTCGG ACCAGCTCCACGGAATCGTCGCGATCTCGGTGCTCGTCTTCATAGTCGCC TTCTTCGTTGCAACCATGTTCACTGAGGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig178:127646..130025-

>mRNA_P-littoralis_Contig178.20.1 ID=mRNA_P-littoralis_Contig178.20.1|Name=mRNA_P-littoralis_Contig178.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=666bp|location=Sequence derived from alignment at P-littoralis_Contig178:127646..130025- (Pylaiella littoralis U1_48)
ATCACGGTGAAGGAATTCACCTACACGGATAACATACGCTACACCGCGCT
GTACCTCCTCTTCACCTATTTCTGGACGAGCGAGTTCATCGTCGCTATGG
GTCAGGTTGTCGTAGCGATGGCCGTGGCGTCGTGGTACTTCTGCCGCGAC
AAGAGCGCGATCGGAAGCGGAACGGTGCTGTCCGCGATAAAGACCTCCCT
CTTTTACCACTCCGGTACCGCAGCCTTCGGATCGCTCATCATCGCCATCA
TCAAGACCATCCGCGCCATCGTGGCGTACATCCAGAAGAAGACCAAGGAC
ACGCACAACAAGATCCTTCAGGCGGTGCTGTGCTGCGTGCAGTGCTGCCT
CTGGTGTCTGGAGAAGTGCATGAAGTTCCTCAACAAGAACGCCTACATAC
AGACGGCCATTTTCGGTTACAGCTTCTGCACGGCCGCGAAAAAAGCCTTC
TTCCTGATCGCGCGGAACATTCTTCGGGTCATGGCGGTCGGGGTCGTGTC
CGAGGTCGTCTTGATCCTGGGAAAGGTGATGATACCCCTAGTTTCGACGG
TGCTCTTCTATGTCGTCGTGGAGGCGACTATCTCGGACCAGCTCCACGGA
ATCGTCGCGATCTCGGTGCTCGTCTTCATAGTCGCCTTCTTCGTTGCAAC
CATGTTCACTGAGGTG
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