mRNA_P-littoralis_Contig178.15.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: D7FSF6_ECTSI (Diphthine--ammonia ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF6_ECTSI) HSP 1 Score: 513 bits (1322), Expect = 2.320e-181 Identity = 254/317 (80.13%), Postives = 277/317 (87.38%), Query Frame = 1
Query: 1 MSTGTTEPAQ-QALRDIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKR--HSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLRVKSLAFGDLHLRELRSWREDVFSGAYPCEFPLFEVPYKELLSRLWAE--TGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHVFHDKAK 936
MST PA Q LRDIEEAHTAAC+AGV+ Y DPATGYKVFT+ SHEKRGFCCGNACRHCPFGHLEV PEWR AGSVP+TVML Q R++RK KLTVGEGW+ F DD GERTVLFWSGGKDSFLTLRALQKR RG E RITLLTTFDGKTG IPFQDTKI DV+EQAR EGVDLLAVPLGGG+GP+PDAYSVTLKAALKPLRVK+LAFGDLHL+EL+SWR+DVFSGAYPCEFPLFEVPY+ELLSRLW E GVTLKVSSVSTDH+GL+G+ VGDV+CEAFVKRLP+ VDAMGENGEFHTHV+H++ K
Sbjct: 1 MSTAAHGPAAAQVLRDIEEAHTAACNAGVAHYADPATGYKVFTQASHEKRGFCCGNACRHCPFGHLEVNPEWRLAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFTDDGGGERTVLFWSGGKDSFLTLRALQKRKREERGSE------RITLLTTFDGKTGKIPFQDTKITDVLEQARHEGVDLLAVPLGGGSGPFPDAYSVTLKAALKPLRVKALAFGDLHLQELKSWRQDVFSGAYPCEFPLFEVPYEELLSRLWEEIAAGVTLKVSSVSTDHKGLEGISVGDVYCEAFVKRLPDIVDAMGENGEFHTHVYHNRGK 311
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A835YXG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG3_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.460e-82 Identity = 150/309 (48.54%), Postives = 183/309 (59.22%), Query Frame = 1
Query: 25 AQQALRDIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVT-PEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGG-----TGPYPDAYSVTLKAALKPL--RVKSLAFGDLHLRELRSWREDVFSGAYPCEFPLFEVPYKELLSRLWAETG---VTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHV 918
A + RDIE+AH AACDAG Y DPATGY VFT++ H KRGFCCGN CRHCPF H V P R G +TV+L G VLFWSGGKDSFLTLRALQ + L+TT D +G + FQ+T I DV++QA+ VDLLAVPL GG GPY DA + AAL+P R+++L FGDLHL ++R+WRE F+ YPC FPLF PY EL +RLWAE +++ VS+V D +++G + AFV LP+GVD MGENGEFHTHV
Sbjct: 2 ADKLARDIEDAHKAACDAGEMAYSDPATGYTVFTELQHIKRGFCCGNGCRHCPFLHQNVEDPALRKNGPT-KTVLLNDGSDASXXXXXXXXXXXXXSARGGGPLNVLFWSGGKDSFLTLRALQAEQ----RDDPGAPEVMLITTCDAVSGTVAFQNTNIRDVMDQAKALQVDLLAVPLKGGEASTGAGPYVDA----VMAALEPFKQRIRALCFGDLHLVDIRAWREATFTDTYPCRFPLFNTPYAELKARLWAEAERGTISVTVSAVRDDLLEQGPLRIGAQYDAAFVGALPQGVDEMGENGEFHTHV 301
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A358DN45_9DELT (Diphthami_syn_2 domain-containing protein n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A358DN45_9DELT) HSP 1 Score: 192 bits (489), Expect = 4.020e-56 Identity = 119/295 (40.34%), Postives = 161/295 (54.58%), Query Frame = 1
Query: 49 EEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLRVKSLAFGDLHLRELRSWREDVFSG-----AYPCEFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHV 918
E+ H AC G Y DP TGY VFT ++ E+RG CCG CRHCP+GH EVTP+ R ML R P + EG D +G +LFWSGGKDS+LTLRAL++ + LLTTFDG++ + Q+ + ++ Q ++ G + VPL GTG Y D + ++ V L FGDLHL +R+WRED FS + P PL+ +PY+ELL+ L V +VS+V+ D + VGD+F + RLP+G DA GENGEFH+ +
Sbjct: 6 EKLHLKACSQGALTYSDPRTGYPVFTALALERRGDCCGCGCRHCPYGHQEVTPDER--------AML-----HRDPWI---EG-----DLPTGPVDLLFWSGGKDSYLTLRALEREATNP---------TVLLTTFDGRSEQVAHQEVLVQEIRHQRKRLGCAQVLVPLFPGTG-YMDRVLLGIQTLQFRTPVARLVFGDLHLDHVRTWREDAFSACSDIASIPIHLPLWGIPYEELLNDL-ESAPVQARVSAVA-DETCAQVISVGDLFNRDLIARLPKGTDAFGENGEFHSCI 267
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A845CH29_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845CH29_9BACT) HSP 1 Score: 182 bits (461), Expect = 6.310e-52 Identity = 117/293 (39.93%), Postives = 151/293 (51.54%), Query Frame = 1
Query: 58 HTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPL-RVKSLAFGDLHLRELRSWREDVFSG-----AYPCEFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHV 918
H AC AG Y+DP TG++VFT+V +RG CCG+ CRHCP+ H V E RP R R+P W T VLFWSGGKDSFLT RAL++ R I LLTTFD + I Q+ I V QA GV LL VPL G +AY + A + + ++ FGDLHL +R WR + F + FPL+ PY+ L+ L A +G +VS+V+ + +G+ V++G F A + LPEGVD GENGEFHT V
Sbjct: 10 HERACRAGEEFYLDPETGWRVFTEVGLRRRGSCCGSGCRHCPYAHEAVPVEERP-------------RLARRP------AWMTGVRPPQEPADVLFWSGGKDSFLTYRALRRESERP---------IILLTTFDATSRKIAHQELDIELVARQAEHLGVPLLGVPLHPG-----EAYEARIAEAARMVPQIARFVFGDLHLEHIRDWRVEAFRELAADLSASLHFPLWGAPYEALMDDLEA-SGAVCEVSAVTEEARGV--VRIGQRFDRALMTALPEGVDRFGENGEFHTLV 266
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A2V3J3I7_9FLOR (Diphthine--ammonia ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3I7_9FLOR) HSP 1 Score: 179 bits (454), Expect = 6.980e-51 Identity = 118/298 (39.60%), Postives = 154/298 (51.68%), Query Frame = 1
Query: 43 DIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLR-----VKSLAFGDLHLRELRSWRE-DVFSGAYPCEFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHV 918
DIEE H AAC A S YVDP + VFT KR CCG CRHCP+ P + P +P + + DD +LFWSGGKDS+L RALQ+ R + LLTTFD +G + Q+ I D+I QA+ V LL VP+ GG AY + A L LR + +AFGDLHLR +R+WRE ++ S +P++ V Y+ L+ L E VT+++S+V D+ L VK+GD F FV++LP VD GENGEFHT V
Sbjct: 15 DIEEIHLAACKAKKSHYVDPKSKLMVFTSFYLSKRK-CCGCGCRHCPY-----KPRYFP----------------HQPSRLLNGNF----DDLPDSVDILFWSGGKDSYLAFRALQRAAVRP---------VILLTTFDAASGIVAHQEVSIDDIIRQAKSVNVPLLGVPIAGG------AYVRLVSAGLDRLRDHGINIVRVAFGDLHLRHVRNWRETELHSLKAELFYPVWGVKYESLMQEL-EEANVTIRISAVDHDNPSLRHVKIGDNFGPGFVEKLPHQVDPFGENGEFHTLV 270
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: B7FXG1_PHATC (Diphthine--ammonia ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXG1_PHATC) HSP 1 Score: 187 bits (476), Expect = 1.510e-50 Identity = 117/301 (38.87%), Postives = 159/301 (52.82%), Query Frame = 1
Query: 37 LRDIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALK--------PLRVKSLAFGDLHLRELRSWRED-VFSGAYPCEFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHT 912
+ D + H AC AG Y DP TGYKVFT+++H +RG CCG+ CRHCP+ H V + AG + Q ML + L+ +G VLF+SGGKDSFL +RAL ++ + + LLTTFD + I QD I V+EQA G+ L+ VP+ G+ + Y ++ L+ P +V +LAFGDLHL L WR + S Y ++P+F+ Y+ L L A V VSS + DH ++VGDV+ F +RLPE VD GENGEFHT
Sbjct: 383 MEDFDRLHREACSAGSLSYPDPVTGYKVFTELAHRQRGKCCGSGCRHCPYNHENVKNK---AGKIQQPAMLTAGDQTGPLALS------------NGNLHVLFFSGGKDSFLAIRALTRQAKQTAPFG-----LALLTTFDATSRIIAHQDMPIDTVVEQATHLGLALIGVPIHRGSA---EGYVTRVRKGLEVLQSSVKPPSKVTTLAFGDLHLENLVEWRNSQIGSLGYKLQYPVFQTEYEILWQDLEASK-VPCVVSSSTVDH-----IRVGDVYSREFAQRLPECVDRFGENGEFHT 654
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A1Y2C0D4_9FUNG (Diphthine--ammonia ligase (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0D4_9FUNG) HSP 1 Score: 181 bits (458), Expect = 4.200e-50 Identity = 122/330 (36.97%), Postives = 165/330 (50.00%), Query Frame = 1
Query: 43 DIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWR--TFRDDKSGERT---------VLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLR-------------VKSLAFGDLHLRELRSWREDVFSGAYPCEFPLFEVPY-KELLSRLWA---ETGVTLKVSSVSTD-------HQGLDGVKVGDV-FCEAFVKR--LPEGVDAMGENGEFHTHV 918
+IEEAHTAAC A Y DPATGY V T +++ CCGNACRHCP+GH V R + V L S ++ ++ T D + + VLFWSGGKDSFLTL L + I LLTTFD +T +P Q+ I D+ Q+ + LL VP G + + Y T+ AL+ L ++ L FGDL L ++R+WRE FS YPC FPLFE+ + K L+ RLW E + + S++ + +GL+ G+V + ++ V+R PE VD MGE GEFHT V
Sbjct: 65 EIEEAHTAACAAKQQMYDDPATGYSVMTAWYLKEKQECCGNACRHCPYGHSRVKDSTRRKNKIKSPVFLKPSATKKGTLDSIRNSTTITTLPDSRFSSKQEFESADGLIVLFWSGGKDSFLTLSTLLQNAG-------PKASIVLLTTFDAETSKVPIQNISIGDISAQSSCLNLPLLLVPRGADS--KNETYIKTITDALEQLSREMSALDSSKSSTIQYLVFGDLFLEDIRAWRESSFSNLYPCRFPLFELDFQKNLMPRLWELCEEYEIRISFSAMENEVMKKWVNDEGLEKDDEGNVRYTKSLVERSDFPETVDLMGERGEFHTKV 385
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A345YEE0_9SPHN (Diphthami_syn_2 domain-containing protein n=1 Tax=Erythrobacter aureus TaxID=2182384 RepID=A0A345YEE0_9SPHN) HSP 1 Score: 176 bits (447), Expect = 7.280e-50 Identity = 116/296 (39.19%), Postives = 148/296 (50.00%), Query Frame = 1
Query: 58 HTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLRVKSLAFGDLHLRELRSWREDVF-----SGAYPCEFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHVFHDK 930
H AC G Y DP TGY+VFT++ KR CCG CRHCPF H +V E R A + Q L ++R P +LFWSGGKDS+L L I LLTTFD ++ I Q+ I +V+ QA G+ L+ VPL G Y D + L AL P L FGDLHL +RSWRE+ F + FPL++ Y LL++L A +G +S+V D L+ V VGD+F V +LP G+DA GENGEFHT V D+
Sbjct: 10 HEEACARGEDTYRDPETGYQVFTRIGLRKRERCCGVGCRHCPFDHEQVRTEDR-ADRIQQAAWLTRTRPAADP-----------------AARILFWSGGKDSYLAYLTLAAEADTP---------IVLLTTFDARSRIIAHQEMAIAEVVAQAEHLGLPLIGVPLQSGPD-YLDQVAPAL--ALVP-GCSGLCFGDLHLTHIRSWREEAFRKHPATSGMQLSFPLWQQDYALLLAKL-AASGAICAISAVRHD---LESVSVGDIFDANCVAKLPRGIDAFGENGEFHTRVTFDQ 270
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A0G4IFE2_9ALVE (Diphthine--ammonia ligase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IFE2_9ALVE) HSP 1 Score: 177 bits (449), Expect = 1.490e-49 Identity = 116/304 (38.16%), Postives = 151/304 (49.67%), Query Frame = 1
Query: 37 LRDIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPKLTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLR-----VKSLAFGDLHLRELRSWREDVFSGA------YPCEFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPE-GVDAMGENGEFHT 912
+ D E H +C+ G Y DPA+GY V T+V H KRG CCG+ CRHCP+ H+ V P+ + ML R + E TVL WSGGKDSFL LRA+ + +GR + LLTTFD + + Q+ ++ QA+ V L+ VPL G + Y L+AALK +R V LA GDLHLR++R WRE+ G YP Y L L A +GV KV++V+T+ G +VG V+ A L E GVD GENGEFHT
Sbjct: 28 IEDFEVMHEESCEKGEEFYRDPASGYLVMTRVLHLKRGRCCGSGCRHCPYAHVNVLPDKDTVQKIQMPAML-----------------HIPRSGLASEVTVLMWSGGKDSFLALRAMLQ--PQGRLHRVGTAGVVLLTTFDAASRMVAHQEVSAREIERQAKHLDVALVGVPLHGSSAV---GYVSRLRAALKVVRDFGCTVSGLACGDLHLRDIRKWREEAVGGGLGLGVLYPLWSDCAGSNYLSLSEDLQA-SGVPCKVTAVTTEDAKRAGAQVGTVYGPALFAALNEAGVDGFGENGEFHT 308
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Match: A0A3D2C8F9_9DELT (Diphthami_syn_2 domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D2C8F9_9DELT) HSP 1 Score: 173 bits (438), Expect = 1.550e-48 Identity = 114/294 (38.78%), Postives = 148/294 (50.34%), Query Frame = 1
Query: 58 HTAACDAGVSRYVDPATGYKVFTKVSHEKRGFCCGNACRHCPFGHLEVTPEWRPAGSVPQTVMLVQSRRRRKPK--LTVGEGWRTFRDDKSGERTVLFWSGGKDSFLTLRALQKRHSRGREXXXXXXRITLLTTFDGKTGNIPFQDTKILDVIEQARQEGVDLLAVPLGGGTGPYPDAYSVTLKAALKPLRVKSLAFGDLHLRELRSWRE---DVFSGAYPC--EFPLFEVPYKELLSRLWAETGVTLKVSSVSTDHQGLDGVKVGDVFCEAFVKRLPEGVDAMGENGEFHTHV 918
H AAC AG Y DP +GY+VFT ++HE RG CCG CRHCP+GH +V + RR KP+ +G D VLFWSGGKDS+L L+ALQ +R + LLTTF+ ++ + Q I +IEQ G+ LL VPL G Y ++ L + + L FGDLHL +R WRE + AY PL+ PY L ++L A + VS+V G D ++VGD + A RLP+ VDA GENGEFHT V
Sbjct: 8 HQAACSAGNRTYRDPESGYRVFTALAHEARGSCCGFGCRHCPYGHSDVP-----------------AHRRGKPRDPFLLGSVPDCGHD-------VLFWSGGKDSYLALQALQAAQARP---------VVLLTTFEDRSEIVAQQQIHIKQIIEQREALGLPLLLVPLQPGPD-YTTRLALALGLLSRRCSITRLVFGDLHLEHIRHWREVNLGPVARAYNATLHLPLWHTPYATLAAQLDAAR-IDCVVSAVDHQRVGGDVLQVGDAYNSALRARLPDSVDAFGENGEFHTMV 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig178.15.1 >prot_P-littoralis_Contig178.15.1 ID=prot_P-littoralis_Contig178.15.1|Name=mRNA_P-littoralis_Contig178.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=336bp MSTGTTEPAQQALRDIEEAHTAACDAGVSRYVDPATGYKVFTKVSHEKRGback to top mRNA from alignment at P-littoralis_Contig178:91864..98761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig178.15.1 ID=mRNA_P-littoralis_Contig178.15.1|Name=mRNA_P-littoralis_Contig178.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6898bp|location=Sequence derived from alignment at P-littoralis_Contig178:91864..98761- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig178:91864..98761- >mRNA_P-littoralis_Contig178.15.1 ID=mRNA_P-littoralis_Contig178.15.1|Name=mRNA_P-littoralis_Contig178.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1008bp|location=Sequence derived from alignment at P-littoralis_Contig178:91864..98761- (Pylaiella littoralis U1_48)back to top |