prot_P-littoralis_Contig178.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig178.3.1
Unique Nameprot_P-littoralis_Contig178.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length70
Homology
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BLAST of mRNA_P-littoralis_Contig178.3.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 2.120e-34
Identity = 58/68 (85.29%), Postives = 65/68 (95.59%), Query Frame = 0 
Query:    1 MVNSYTSKSSYVYDYVVDQEGRPEKHIKTIWVLFPEKGQLATITAQCNESDYATVGKSIDALIASVTK 68
            M+ SYT K+SYVYDY+VDQEGRPEKHIKT+WVLFPE+GQLATITAQCNESDYA VGK+ID+LIASVTK
Sbjct:  161 MLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQLATITAQCNESDYAKVGKTIDSLIASVTK 228
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BLAST of mRNA_P-littoralis_Contig178.3.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.010e-10
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:    1 MVNSYTSKSSYVYDYVVDQEGRPEKHIKTIWVLFPEKGQLATITAQCNESDYATVGKSID 60
            M+N  +  S Y YDY++ QEGRPEKH+K++W +      L T+TAQC+E++Y      +D
Sbjct:   95 MLNVKSKNSMYYYDYIIAQEGRPEKHLKSVWSVVSGDA-LVTLTAQCDEANYPAYASQMD 153
[Close]
BLAST of mRNA_P-littoralis_Contig178.3.1 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 48.5 bits (114), Expect = 6.030e-5
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:    1 MVNSYTSKSSYVYDYVVDQEGRPEKHIKTIWVLFPEKGQ--LATITAQCNESDYATVGKSIDALIAS 65
            M+   + K S+VYDY + Q+G P +H++++  +  +     L T+TAQC E  +A V  +  A+I S
Sbjct:  147 MLEQASVKGSFVYDYTIQQQGGPMRHLRSLLAIKADGAASVLITLTAQCLEPKHAAVAATFKAIIES 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSF3_ECTSI2.120e-3485.29PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDA3_9STRA3.010e-1043.33PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A0M0J7U2_9EUKA6.030e-534.33Psbp domain-containing protein chloroplastic-like ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 2..67
e-value: 5.7E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:25775..27719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.3.1mRNA_P-littoralis_Contig178.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig178 24689..32360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig178.3.1 ID=prot_P-littoralis_Contig178.3.1|Name=mRNA_P-littoralis_Contig178.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=70bp
MVNSYTSKSSYVYDYVVDQEGRPEKHIKTIWVLFPEKGQLATITAQCNES
DYATVGKSIDALIASVTKT*
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