prot_P-littoralis_Contig177.77.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig177.77.1
Unique Nameprot_P-littoralis_Contig177.77.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length303
Homology
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 1.030e-122
Identity = 188/276 (68.12%), Postives = 212/276 (76.81%), Query Frame = 0
Query:   21 IAVLALSSRLCLAWQAPTSPHSSRPCFVGVSSP---RRCGSAVPFMGRSRFGATRQSRTRVAV--GDVVVPVRDDTKDHRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIAL 291
            +AV  L S + LAWQAPTSP SS    V  +S     R  SA PFM R R   T+Q+    A       + +R D + HR FV+KLL LTGDPLE++GGR+VVFRG+P A LMLIGEAPGAEEDRLGVPFVGRSGQLLDD+LRAVG DP+ +VYVSNIVRRRPIDNR PTPEEM+FYLP LLEEI LV P VIV LGASSTKALLP+ETRGIT+ RGQWADP  +A+IHGG L D  IMPWFHPSYLLRN+GERSRQEGGVRWH RNDL  V+  +
Sbjct:   62 VAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSCCRTRSRSAAPFM-RRRCATTQQNMAIKAATTSGFGMSMRGDAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVV 336          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 232 bits (592), Expect = 3.590e-72
Identity = 118/202 (58.42%), Postives = 141/202 (69.80%), Query Frame = 0
Query:   92 KDHRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDE 293
            KDH +    LL LTGDPLE  GGRIVV+RG+P+A+LM++GEAPGA ED  G PFVGRSGQLLD +L+A G DP+ D+YVSNIVRRRP +NR PT  E+ +Y P LLEEIRLV P +I+T G  S +A+L  E RGITKVRGQW  PGT   +        W MPWFHPSYLLRN    ++ EGG +W T  D   V+   DE
Sbjct:   58 KDHAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTGRWSMRAVLN-ERRGITKVRGQWYAPGTTPDLPAAT----WAMPWFHPSYLLRNP---TKDEGGPKWLTWVDAQEVRRKYDE 251          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 210 bits (534), Expect = 4.690e-64
Identity = 109/200 (54.50%), Postives = 135/200 (67.50%), Query Frame = 0
Query:   94 HRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDE 293
            H+  V+ L  LTGDPLE  GG +V++RGNP A+LM+IGE PGAEEDRL  PFVGRSGQLLD +LRAV  DP+ DVY++N+V+RRP +NR PTPEE+ FY P L EEIRLV PK+I+  G  +   +L  E RGITKVRGQW + G            +WIMP FHP+YLLRN     R  G  +  T +D+  V+   DE
Sbjct:   30 HQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTGRYAMLTILG-EKRGITKVRGQWFERG-----------GRWIMPMFHPAYLLRNP---QRTPGSPKALTWDDIRAVRARYDE 214          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 205 bits (522), Expect = 1.600e-62
Identity = 106/200 (53.00%), Postives = 134/200 (67.00%), Query Frame = 0
Query:   94 HRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDE 293
            H++ V+ L  L GDPLEQ GG IV++RGNP A+LM+IGE PGA EDRL  PFVGRSG+LLD +L AV  +P+ DVY+SN+VRRRP  NR P P+E+ FY P L EEIRL+ PK+I+ +G  +   +L  E RGITKVRGQW       Q  G     +WIMP FHP+YLLRN G+R      + W   +D+  V+   DE
Sbjct:   11 HQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIGRHAMMTILK-EKRGITKVRGQWF------QKDG-----RWIMPMFHPAYLLRNPGKRPGSPKSLTW---DDIRAVRAKYDE 195          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 193 bits (490), Expect = 1.330e-57
Identity = 97/202 (48.02%), Postives = 130/202 (64.36%), Query Frame = 0
Query:   94 HRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDEWR 295
            H+  V+ L  LT DPLE  G  +V++RG P+A LM+IGEAPGAEED++G PFVGRSGQLLD +L+AV  + + D+Y++N ++RRP +NR P  EE+E+Y P L EEIRLV PK+I+  G  +   +L  E RGITKVRGQW + G            +W+MP FHP+YLLRN  +       + W    D+  V+   DE R
Sbjct:   15 HQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTILQ-EKRGITKVRGQWVEQG-----------GRWVMPIFHPAYLLRNPRKTPGSPKALMW---EDIRAVRAKYDELR 201          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: W7TG57_9STRA (Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG57_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.000e-56
Identity = 102/202 (50.50%), Postives = 135/202 (66.83%), Query Frame = 0
Query:   94 HRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADP--GTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDE 293
            H DFV  L  L GDPL+ EG R+V+ RGN  A++M+IGEAPG  ED  G PFVGR+G+LLD +L +VGLD +  VY++N+V RRP +NR P+  E+ +YLP L+E +RLV P +I+  GA + KALLP E +GIT++RGQW +   GT   + G   R   +MP FHPSYLLRN    SR+  G +W T  D+  V+   DE
Sbjct:   83 HADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSR--LVMPIFHPSYLLRNP---SRKVEGPKWLTWQDIQAVRRRYDE 278          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: C1FF23_MICCC (Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF23_MICCC)

HSP 1 Score: 189 bits (479), Expect = 2.190e-55
Identity = 111/259 (42.86%), Postives = 150/259 (57.92%), Query Frame = 0
Query:   49 GVSSPRRCGSAVPFMGRSRFGAT--------RQSRTRVAVGDVVVPVRDDTKDHRDFVDKLLR-LTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDEWRMVE 298
            G++ PR   SA+P +G  R            R  R R    D     R  +    D +   LR LTGDPLE +GGRIV FRG+  A++M+IGEAPGAEED+LGVPFVGR+G+LLD++  +V L  D   YV+N+V+RRP++NR PT  E+E+Y   L EEIRL+ P +IV  G  S + LL     GITK+RG+W D           +  + +MP FHPSYLLRN  +       + W   +D+  VK  +DE  ++E
Sbjct:    4 GLALPRALASALP-LGNHRSSPRSVPPRAPPRWVRPRALASDA--DARSPSFSSLDELAHHLRSLTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLSTDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKNCEGITKIRGRWFD-----------VDGRVVMPMFHPSYLLRNPQKTPGSPKALTW---DDIREVKRKVDELSLIE 245          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A7C3CIK3_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3CIK3_9CHLR)

HSP 1 Score: 186 bits (473), Expect = 5.620e-55
Identity = 103/200 (51.50%), Postives = 126/200 (63.00%), Query Frame = 0
Query:   94 HRDFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDE 293
            H   +  +  LT DPL   G R+V++RGNP+A L+++GE PGA EDRLG P+VGRSGQLLD +L A G D    VYV+N V RRP DNR PT  E++FYLP LLE IR+V PKVI+  G  S + +L  E RGITKVRG W       Q H     D+WIMP FHP+YLLRN    SR  G  +  T  D+  V+   DE
Sbjct:   15 HAAIIRAMEALTDDPLYPTGNRMVIYRGNPQADLLIVGEGPGANEDRLGKPYVGRSGQLLDKILEAAGFDSQNGVYVTNTVFRRPPDNRDPTQAELDFYLPYLLELIRIVDPKVILLTGRFSMRQILG-EKRGITKVRGTWY------QRH-----DRWIMPMFHPAYLLRNP---SRAVGKPKSLTWQDIQAVRRKYDE 199          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.210e-53
Identity = 92/178 (51.69%), Postives = 123/178 (69.10%), Query Frame = 0
Query:  101 LLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRW 278
            L  L+GDPLE+ GGR+V +RGNP A+++++GEAPGA ED LGVP+VGR+G+LLD +L A G D + DVY +N+V+RRP +NR PT  E+ +Y PLLLEE+RLV P ++V  G  S + LL  + +GITKVRGQW     + +IHG        MP FHPSYLLRN   ++     + W
Sbjct:   35 LAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTGRFSMRTLLDVK-QGITKVRGQWFPLPGLPEIHG--------MPMFHPSYLLRNPSRKAGSPKSLTW 203          
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.340e-53
Identity = 102/194 (52.58%), Postives = 130/194 (67.01%), Query Frame = 0
Query:   96 DFVDKLLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSGQLLDDVLRAVGLD--PDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEIRLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRDKWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHV 287
            +F      + GDPL+  GG +VVFRGNP  ++M++GEAPG EED+  +PFVG++GQLL+ +L   G D  P  +VY++N+V+RRP +NR PTPEE+ FYLPLL EEIRLV P +IV  G+ S KALL  E RGITKVRG W D            + K  MP FHPSYLLRN   RS+++   RW T NDL +V
Sbjct:   63 EFFQVTQSMEGDPLDG-GGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYITNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAGSFSMKALLE-EDRGITKVRGTWYD-----------YKGKKCMPIFHPSYLLRN---RSKEKNQPRWLTWNDLLNV 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN93_ECTSI1.030e-12268.12Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s... [more]
A0A835YMS9_9STRA3.590e-7258.42Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi... [more]
A0A3M1EZS2_9CHLR4.690e-6454.50Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ... [more]
A0A7C3BN30_9CHLR1.600e-6253.00Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]
A0A1W9W486_9CHLR1.330e-5748.02Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac... [more]
W7TG57_9STRA3.000e-5650.50Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidac... [more]
C1FF23_MICCC2.190e-5542.86Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas c... [more]
A0A7C3CIK3_9CHLR5.620e-5551.50Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae... [more]
A0A7S2S1J0_9STRA1.210e-5351.69Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul... [more]
A0A7S2V4W6_9STRA1.340e-5352.58Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 118..285
e-value: 4.0E-30
score: 116.1
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 120..270
e-value: 3.5E-36
score: 124.5
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 118..285
e-value: 4.0E-30
score: 116.1
NoneNo IPR availablePANTHERPTHR33693:SF1TYPE-4 URACIL-DNA GLYCOSYLASEcoord: 103..288
NoneNo IPR availablePANTHERPTHR33693TYPE-5 URACIL-DNA GLYCOSYLASEcoord: 103..288
NoneNo IPR availableCDDcd10030UDG-F4_TTUDGA_SPO1dp_likecoord: 108..269
e-value: 3.8971E-63
score: 194.97
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 97..299
e-value: 3.0E-51
score: 175.6
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 95..288
IPR005273Uracil-DNA glycosylase family 4TIGRFAMTIGR00758TIGR00758coord: 108..272
e-value: 1.8E-41
score: 139.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:388957..396685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.77.1mRNA_P-littoralis_Contig177.77.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig177 388884..397492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig177.77.1 ID=prot_P-littoralis_Contig177.77.1|Name=mRNA_P-littoralis_Contig177.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=303bp
MALPQRPRSLMLDYVGALATIAVLALSSRLCLAWQAPTSPHSSRPCFVGV
SSPRRCGSAVPFMGRSRFGATRQSRTRVAVGDVVVPVRDDTKDHRDFVDK
LLRLTGDPLEQEGGRIVVFRGNPEAQLMLIGEAPGAEEDRLGVPFVGRSG
QLLDDVLRAVGLDPDVDVYVSNIVRRRPIDNRAPTPEEMEFYLPLLLEEI
RLVAPKVIVTLGASSTKALLPFETRGITKVRGQWADPGTVAQIHGGALRD
KWIMPWFHPSYLLRNAGERSRQEGGVRWHTRNDLHHVKIALDEWRMVERP
PP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005122Uracil-DNA_glycosylase-like
IPR036895Uracil-DNA_glycosylase-like_sf
IPR005273Ura-DNA_glyco_family4