mRNA_P-littoralis_Contig177.68.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig177.68.1
Unique NamemRNA_P-littoralis_Contig177.68.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 4.910e-52
Identity = 126/362 (34.81%), Postives = 190/362 (52.49%), Query Frame = 1
Query:    1 RSPRLATLSGCTGITISSVAIVRKILGFWPEDGAW---DLYGTLMALLLYTAAYDFRGIRLLVMYNPHSRQRWGRFIK-DALMTKILLVSFVVLSMLVSILCLFYGIKRRGASQYLLAYVADVILRSISISMLEFAKLRKTNDMFQMSPEVR------LFIVFDLLSLAAYIAFSWRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCVITT--------IMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTFNK 1032
            RSP L T SG  G+   S A+ R ++  +P   +     ++   +  L    AY  RG+R++VMY P  RQRWGR++K +A M K+LL ++V++ +   I+    G+ R  +    +  +  V+  S S+++  F +LR+T D+F++S E++      L     ++ L +  A    + +V F   RF   +WLTNIQP R  L R     +  G ++A  FP+ PWRK     VAI   D         S  C   T         I++ P  LEAFE+FCRKALCSE ++FL     F+  ++A         + ED  FA F  +  KYIKDGSPFE+NIESKTK  +++ TD++ F +
Sbjct:   43 RSPVLMTASGLAGVLAGSTAVSRTVM--FPGLRSLFILRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWGRYLKKEAAMVKVLLTAYVIVEVAAWIVVRHVGLARVASFMVTVVKIDTVVTLSASLAL--FGQLRRTQDVFKVSLEIQRAGACALLTSVMIMFLGSIPAGVLEFYLVLFYTVRFHVILWLTNIQPARERLGRRDATPNTRG-IMAKLFPYVPWRK-HGGTVAI---DSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYAS-------TANEDTNFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQ 388          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.060e-50
Identity = 144/411 (35.04%), Postives = 197/411 (47.93%), Query Frame = 1
Query:    1 RSPRLATLSGCTGITISSVA---------IVRKILGFWPEDGAWDLYGTLMALLLYTAAYDFRGIRLLVMYNPHSRQRWGRFI-KDALMTKILLVSFVVLSMLVSILCL-------------------------------------------FYGIKRRGASQYLLAYVADVILRSISISMLEFAKLRKTNDMFQMSPEVRLFIVFDLLSLAAYI--------AFSWRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCVITT------IMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTFNK 1032
            RSP L T+SG  G+++ + A         +V   L F P      +    + L+ +  AY  RGIRLLVMYNPH R RWGR+  K+  M K+++V FVVL ++ S+                                              F   +  GA   ++A +A  +L +I  S++   KL +T DMF MS E+R    F LL+L   +        A    + ++ F+ TRF  AVW+TNIQPVR  LQR A    N G + AS FP+ PW   ++  VAI   +++   T   S     +        I++ PP LEAF +FCRKALCSE LMFL    DF   L A        D+  D  FA F  +V +YI+DGS FEVNIESKTK  +L  T   +F +
Sbjct:   51 RSPLLGTVSGLAGVSVWAFATTGAVINSEVVNAQLAFAP------IITVPLVLVAFVGAYIIRGIRLLVMYNPHMRHRWGRYFNKETFMVKVVIVLFVVLQLVSSLAXXXXXXXXXXXTGDDNTMLGETFHEALQAMRWLTTLFTELLIRIKFAAYRVAGA---MIAVIAVDMLLTIGASLMLVGKLARTKDMFDMSVEIRSVGGFALLALGELMGIVIPMVPATVLNFYLILFLTTRFGTAVWITNIQPVRKVLQRRADHPINAGGI-ASLFPYVPWTT-RSGAVAIDVMNESKVFTKPSSSKFTSVKLDDKLEEILRFPPLLEAFGEFCRKALCSESLMFLTAGKDFHESLDAS-------DADYDTIFARFNEIVDQYIRDGSSFEVNIESKTKAQILSRTSMSSFKE 443          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.450e-41
Identity = 119/385 (30.91%), Postives = 180/385 (46.75%), Query Frame = 1
Query:    1 RSPRLATLSGCTGITISSVAIVRKILGFWPEDGAWDLYGTLMALLLYTAAYDFRGIRLLVMYNPHSRQRWGRFIKDALMTKILLVSFVVLSMLVSILCLFYGIKRRGASQYLLAYVADVILRSISISMLEFAKLRKTNDMFQMS--------------PEVRLFIVFDLLSL--------------------AA---YIAFSWRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCV----ITTIMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTFNK 1032
            RSP LA +SG  GI IS   I+   L +    G   +   +  +L +TA Y  RG+RLL+M+ P SRQRWG F+++     I+L  F+VL ++V      YG+  +   Q+       +      +  +  A   +TN     +              P   LF    L  L                    AA   Y     R  MV FM+ RF  A+W+TNI+PVR  L++ +  K    +    +FP+ PWR+  + KVA+G  +  H  TC       +    + TI+ +PP LEAF+ FC+KALC E ++ L EV  F   ++AV       ++ +DA F  F  +V K+IK GS +EVNI+ + +  ++R  D   F +
Sbjct:  107 RSPMLAVMSGAIGILISGPEIIGMTLTYDMSAGPEKIL-CVPLMLSFTATYILRGVRLLIMFTPRSRQRWGSFLRERNFIPIVLAIFLVLQVVVWSFVPTYGVPIKCWIQHNCVKSQGISFVWNMLVCVPRAGTTRTNGHPSFNCRWCSVLREAPGALPRATLFTCLHLSILNFRSVWCCECLDAAMVMGMKAAGEFYTPTLMRMHMVVFMVVRFHTALWITNIKPVREVLRQSSDRK----DYHVPWFPYVPWRRSASGKVAVGMNETMHV-TCTSRPLSTIQLGRLETIINTPPLLEAFDSFCQKALCGESILLLREVAAFRDSIYAV-------EADDDALFKEFVAIVNKFIKSGSSYEVNIDCRARTGVMRDVDEARFKE 478          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: D7FN97_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN97_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 2.910e-26
Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query:  616 NLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCVITTIMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKEDA-----------EFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTFNK 1032
            + ++S FP+ PW K + SKVA+         +   +G   V+  I+Q PP  +AFE++CR ALCSE LMFL +  +F+S LHAV   S A    E A            F  F  +V KYI++GSPFEVNIESK +  +LR  DR +F +
Sbjct:    2 SFISSLFPYIPWTKHERSKVAVEASYTLRSQSASSAGGT-VLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFSTAGKDPESAAVAVNECEHNPNFEQFAAIVDKYIREGSPFEVNIESKIRNEILREVDRASFER 150          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: A0A6H5JLE7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE7_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.600e-25
Identity = 84/240 (35.00%), Postives = 121/240 (50.42%), Query Frame = 1
Query:  346 VADVILRSISISMLEFAKLRKTNDMFQMSPEVRLFIVFDLLSLAAYIAFSWRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCVITTIMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAV--FTPSRAFDS---------KEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTFNK 1032
            VAD +L ++  S++ F KLRKT D+F MS E++   +F + +L  Y A           ++   P+   +NIQPVRAAL R  G        ++  FP+ PW K  + KVA+             +G   V+  I+Q PP  +A           E LMFL +  +F+  LHAV  FT + A  S         +E+  F  F  +V KYI++GSPFEVNIESK +  +LR  DR +F +
Sbjct:   20 VADTLL-TLGASLVLFGKLRKTKDVFDMSLEIQKVGIFAMAALECYHAVK--------DLSTVGPSQARSNIQPVRAALLR--GPAKETVGFISLLFPYIPWTKHGSRKVAVEASYTLRSQAASSAGGT-VLDLIIQFPPLFQACLSPVSDCAFVESLMFLVDADEFNCSLHAVSKFTSAGADPSPAAMGVVECEENLNFEQFAAIVDKYIREGSPFEVNIESKIRDEILREVDRASFRR 247          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: A0A6H5K6R2_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R2_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.190e-22
Identity = 64/165 (38.79%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  553 TNIQPVRAA-LQREAGGKHNEGNLLASFFPWQPWRKGKTSKV--AIGRQDKTHPPTCGGSGTCCVITTIMQS----PPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTF 1026
            +NIQ +RA+ L R     +N G ++AS  P+ PWR+  +     A+GR+  +   + G       +   ++      P LEAFE+FC+KALC E LMFL  V  F   +HA    S A D   D  F     +V KY++ GSPFEVNI+SKTK  +L    R+TF
Sbjct:    7 SNIQSIRASVLPRRRRNNYNNGGIIASLLPYIPWREDASIVAVDAVGRRFTSRGVSLGNINRSVKLDDALEQILCFTPLLEAFEEFCQKALCIESLMFLKAVMGFRGSVHA----STASD---DGNFTLLTDIVQKYVQSGSPFEVNIDSKTKSNILVKITRETF 164          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: D8LTR6_ECTSI (Developmental regulator FlbA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 9.650e-21
Identity = 92/354 (25.99%), Postives = 158/354 (44.63%), Query Frame = 1
Query:    1 RSPRLA-TLSGCTGITISSVAIVRKILGFWPEDGAWDLYGT-----LMALLLYTAAYDFRGIRLLVMYNPHSRQRWGRFIKDALMTKILLVSFVVLSMLVSILCLFYGIKRRGASQYLLAYVADVILRSISISMLEFAKLRKTNDMFQMSPEVRLFIVFDLLSLAA-----YIAFS---WRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCV----ITTIMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKED-AEFATFCVLVGKYIKDGSPFEVNIESKTKIALLR 1005
            RSP LA TL  C  +    +     +   W   G    +G         LL+   A     +RLLVM+ P  R +WGRF ++  +   L+ +++++   +       G+ R G     L   +     ++   +L   +L K +D+  MS ++R+  +  LL         Y++ S   ++Y  +  M     P VWLTNI+PVR   +     + +  +         P+R+  T  + +G     +  +   +G   +    +T+IM   P  EAF +FCR++LC E   FL +V +F   +      S A ++++    F  +  +V  YIKDGS  EVNI S TK ++++
Sbjct:   44 RSPLLACTLGLCITLRFEFLLFAHTL--HWGHSGLVASHGVTNMIEFPVLLISEFALVMSAVRLLVMFFPKLRAKWGRFTREKDLVYGLVCAYILMEGALWSGVAAVGVSRTGGVLATLELFSGST--TVVAGVLVGGRLNKVDDLLHMSTDIRVVGMLLLLMSCVHAGLHYVSMSPMEYKYYTIVLMALSHPPIVWLTNIRPVREVERNIPARRRSRKDFQLP----SPYRRWSTKNIRVGVAADENNNSLPWNGEVYLDDNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFKDLI----ADSAAEETEKSFGGFGGYLAVVNDYIKDGSHSEVNIASTTKRSIMQ 385          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: A0A6H5KX00_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX00_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 8.450e-20
Identity = 97/357 (27.17%), Postives = 159/357 (44.54%), Query Frame = 1
Query:    1 RSPRLA-TLSGCTGITISSVAIVRKI----LGFWPEDGAWDLYGTLMALLLYTAAYDFRGIRLLVMYNPHSRQRWGRFIKDALMTKILLVSFVVLSMLVSILCLFYGIKRRGASQYLLAYVA-DVILRSISI--SMLEFAKLRKTNDMFQMSPEVRLFIVFDLLSLAA-----YIAFS---WRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCV----ITTIMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCL--HAVFTPSRAFDSKEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLR 1005
            RSP LA TL  C  +    +     +     G    DG   L     ALL+   A     +RLLVM+ P  R +WGRF ++  +   L+ +++++        L+ G+   G S+ +   V  ++   S ++   +L   +L K +D+  MS ++R+     LL         Y++ S   ++Y  +        P VWL NI+PV    +     + +      SF    P+R+  T  + +G        T   +G   +    +T+IM   P  EAF +FCR++LC E   FL +V +F   +   A  T  ++F       F  +  +V  YIKDGS  EVNI S TK ++++
Sbjct:   44 RSPLLACTLGLCITLRFEVLIFAHTLHWGHSGLVASDGVTSLI-EFPALLISEFALVMSAVRLLVMFFPKLRAKWGRFTRERDLVYGLVCAYILMEG-----ALWSGVAAVGLSRTVGVLVTLELFTGSTTVVAGVLLGGRLNKVDDLLHMSTDIRVVGTILLLMTCVHKGLPYLSMSPTEYQYCKITLTALLHPPIVWLINIRPVLEVGRNIPARRRSR----KSFHLPSPFRRRSTKNIRVGVAADEDINTLPWNGEAYLNDNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFKDLIADSAAETSEKSFGG-----FGGYLAIVNDYIKDGSHSEVNIASTTKRSIMQ 385          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: A0A6H5KEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 4.250e-8
Identity = 37/113 (32.74%), Postives = 53/113 (46.90%), Query Frame = 1
Query:  493 SWRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGGKHNEGN---LLASFFPWQPWRKGKTSKV--AIGRQDKTHPPTCGGSGTCCVITTIMQSPPHLEAFEDFCRKALCSEL 816
            +++Y  VA     + P +W+ NIQPVR  L    G  ++  +   LL    PW+   K   + +  A   +   H   C  +     +  IM   P  EAF +FCRKALCSEL
Sbjct:   11 AFKYAHVAHTAISYSPVIWIVNIQPVREILSNNYGCTNSTLDGFCLLYGIIPWRSTVKASRTVLPAASAHRSPVHSQICSDAYLGTPLDDIMNFLPLREAFGEFCRKALCSEL 123          
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 9.240e-7
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  748 IMQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSR-AFDSKEDAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRI 1008
            + ++P    AFED+ ++ALC E ++FL EV  + S  +A  T +R + +S    +F TFC +   +IK GSP EVNI    K A+L +
Sbjct:  125 LARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYA--TSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDV 210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.68.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LLA9_ECTSI4.910e-5234.81RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K976_9PHAE1.060e-5035.04RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYZ5_ECTSI3.450e-4130.91RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FN97_ECTSI2.910e-2641.33RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JLE7_9PHAE3.600e-2535.00RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K6R2_9PHAE2.190e-2238.79RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LTR6_ECTSI9.650e-2125.99Developmental regulator FlbA n=1 Tax=Ectocarpus si... [more]
A0A6H5KX00_9PHAE8.450e-2027.17RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KEZ0_9PHAE4.250e-832.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T5_ECTSI9.240e-738.64RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:340944..344012 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LLA9
Model size1032
Max annot lvl2880.D8LLA9|-
Hectar predicted targeting categoryother localisation
Exons5
Evalue8.06e-53
EggNOG OGs2D0MX@1|root,2SERP@2759|Eukaryota
DescriptionRegulator of G protein signaling domain
Cds size1032
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789851.2096856-CDS-P-littoralis_Contig177:340943..3412731680789851.2096856-CDS-P-littoralis_Contig177:340943..341273Pylaiella littoralis U1_48CDSP-littoralis_Contig177 340944..341273 +
1680789851.225651-CDS-P-littoralis_Contig177:341289..3414341680789851.225651-CDS-P-littoralis_Contig177:341289..341434Pylaiella littoralis U1_48CDSP-littoralis_Contig177 341290..341434 +
1680789851.237967-CDS-P-littoralis_Contig177:342032..3421111680789851.237967-CDS-P-littoralis_Contig177:342032..342111Pylaiella littoralis U1_48CDSP-littoralis_Contig177 342033..342111 +
1680789851.248967-CDS-P-littoralis_Contig177:342805..3430641680789851.248967-CDS-P-littoralis_Contig177:342805..343064Pylaiella littoralis U1_48CDSP-littoralis_Contig177 342806..343064 +
1680789851.2633157-CDS-P-littoralis_Contig177:343793..3440121680789851.2633157-CDS-P-littoralis_Contig177:343793..344012Pylaiella littoralis U1_48CDSP-littoralis_Contig177 343794..344012 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.68.1prot_P-littoralis_Contig177.68.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig177 340944..344012 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig177.68.1

>prot_P-littoralis_Contig177.68.1 ID=prot_P-littoralis_Contig177.68.1|Name=mRNA_P-littoralis_Contig177.68.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=344bp
RSPRLATLSGCTGITISSVAIVRKILGFWPEDGAWDLYGTLMALLLYTAA
YDFRGIRLLVMYNPHSRQRWGRFIKDALMTKILLVSFVVLSMLVSILCLF
YGIKRRGASQYLLAYVADVILRSISISMLEFAKLRKTNDMFQMSPEVRLF
IVFDLLSLAAYIAFSWRYVMVAFMMTRFQPAVWLTNIQPVRAALQREAGG
KHNEGNLLASFFPWQPWRKGKTSKVAIGRQDKTHPPTCGGSGTCCVITTI
MQSPPHLEAFEDFCRKALCSELLMFLGEVGDFSSCLHAVFTPSRAFDSKE
DAEFATFCVLVGKYIKDGSPFEVNIESKTKIALLRITDRDTFNK
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mRNA from alignment at P-littoralis_Contig177:340944..344012+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig177.68.1 ID=mRNA_P-littoralis_Contig177.68.1|Name=mRNA_P-littoralis_Contig177.68.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3069bp|location=Sequence derived from alignment at P-littoralis_Contig177:340944..344012+ (Pylaiella littoralis U1_48)
AGGTCGCCCAGACTGGCGACTCTGTCGGGTTGCACGGGTATCACAATATC TTCCGTCGCCATAGTCCGGAAGATACTGGGCTTCTGGCCTGAAGATGGCG CGTGGGACCTGTACGGGACATTGATGGCGTTGCTGCTGTACACCGCGGCG TACGACTTCCGGGGCATTCGACTGCTCGTCATGTACAATCCTCACTCTCG GCAGCGCTGGGGACGTTTCATCAAAGACGCGCTCATGACGAAGATCTTGC TGGTCTCCTTCGTGGTTCTCTCGATGCTGGTCTCGATTCTCTGCCTTTTT TACGGAATAAAGAGGCGAGGAGCGAGCCAAGTAGAATATCAACGAGTACC TCTTAGCTTACGTGGCAGATGTCATACTTCGAAGTATATCTATCTCAATG CTCGAGTTCGCTAAGCTGAGGAAGACGAACGACATGTTTCAAATGTCGCC GGAGGTGCGGTTGTTCATCGTCTTCGACCTTCTTTCCCTGGGTGAGTGAA CGGTGCTCATCCTTGCGTGCACCTGTGTCTGTTTCGAGTCAAGCATGACG TTTGCCGTCGGTGCGAAACAGCATGCTGTGCAAACCATCAACACGAGTCT ACTTAGACGCTGTAGAACCCCAAGGCCCGTCGCAGAGTGAGGGGTACTCA AGAGTAGTTTCATATCTTCCACGATTCACGATGACGGTTGGTTTGCGAAG CGTGTCGGTGCAGAAAGAATATCTTGCACCAATTTTCGGAACCAGATGCT CATCACCGCACAGTAGGAAGCCACAGAGAGGGGACAGGGTCGAGGAGCAC CCTCGGGTCGCCAGAGGGTAGGCGGCCTCCATGTTGGATATTCGGGAGCA GCTTACACCTGATCACACCGCATTAGCATCCATATTCCACTCTCACCGTT TTGTGTGTATATGTAGCGAACGCCGAGGGTCGAGAAGAGGGCCGGAGGAG TATCATTTCACTCGCTGTGAGCGTGAGGCAATCCCACGCCCAAAATTTCA ACGCCGCATTTTGTATGTCTGATGACGACGACTTTTGTCTACCGTTGCGC CGTACCCACCGCGTGATCCTGTTGGTGCAGTTTTCACAGCCGCTTACATC GCATTTTCTTGGCGGTACGTCATGGTCGCGTTCATGATGACACGGTTCCA GCCTGCCGTGTGGTTGACGTGAGTGAGGGAATGTTCCCAGCACATGGCTA TAGTATTGGAAATTCACGAGTTGATGCCAACACGTGCAAGCCGCCGGTTT GTAATGTACGGCTTCTCCAAGTCTTCTCGCAGATATCATTGCCGCGTCAG TTGATTGTTGTTGTCGAGTTTACCACCATGTGCAGGCGTTTCGCTTCCAG TTTCAGGTGTTTCATCGACCGAGCTCCGGTCCAAGCTCAGGGTAGCGCCA AACCTCTTTGAACGCGAAATATTGGTGATATTGAGCTCGAACCTAGCATT CAGCTCGAACCTGATTGAGCTCGTTCCCCATGCTCACCTCTACCTATCAC CGCATGGCCACCTATATGATGGCTCTTCCTTTGAAATTGCTTGCGACCCG GAAAACGAGTAGAGCCTTCGCTGCTACTGTGTTTCAAGGCAGACTTGTTC ACACGCGGACTGCGCACGGTTTCGGGAGTATCTCGACAGCTGCATAAGCG GTGATATTTTGAACTTGTGTTTGCTGAGGGTGAATTCGCCGCGGCCTGCC GTACGCGTGGTGCTACAGGACAGATTTGCAACTCGTGACCTTGCCCATTC ATTTCGGAAAAATACCAAGTATCGGCATCAAACCCTACATAAGGCCATGA AACACATGATACGCACACACCGGTGGGGCGCCCGACGCATAATTGTGGAT CCTTGTTTGTAGCAACATCCAACCCGTACGGGCTGCACTTCAGCGGGAGG CCGGAGGAAAGCACAACGAAGGCAACCTTTTGGCTTCATTTTTCCCTTGG CAACCGTGGCGGAAAGGCAAGACCAGCAAAGTTGCGATCGGCCGGCAAGA CAAGACACACCCGCCCACTTGCGGTGGTAGCGGAACATGCTGCGTGATTA CCACCATCATGCAATCCCCCCCACATCTTGAAGCCTTCGAAGACTTCTGC CGTAAGGCCCTCTGCAGCGAGGTAAGAGAGCCTCCGCAGTTTGACATGAA ATCACAGCACCACTGAAACGTTACCCTCAAAACCATCTACGAACTCGCTA CGTATACCAATCGTTGAATCACGTTGCGTACGAAGCCGTATTTTTGAAGT AGCCCGGGGCTCGTATATGTTTCTTTTACGATTTGAAATGCGACAATAGA CGAATCGAGCACTCACTCCCGTTTCTTCCGACCTTTCCGACAAGACACGT TGGATAACGGCAACCGTTGCCGCGGTCAGAGGACAGACTTGCGGTGGTCT ATTTAACGCCTCTATTTCCTGGACACGCAACCCAGATGCGCTACACTGTC GAAAATAGACAAAAAGTTCCATCGGTGACAGGTCGAGGCAAGCACAGCCC TACGCAACGCCCTAGGCGCTGCGAATGACTCCGGGTACGGAGGTAGTTTC CAGCCGCTTTGTCATAGCGGGTCTTCAGCCACGCCTCGACGTGACAATAA CGTTTTTTTGCCGTGTTAAATTCTCTCGGAGTTAGGGACGTGCGACTCCC ATGAGCTGGTCTTGTGTGAGATGCAGAGCTGCTTTCGAGAGAGGCTGATG CCCTGCTGTCTCACACGAGGTGCGACACCTAACGCGGCATTGCTCTACGA TTTATTGTCAAAGATGGCAGGCACCTTGTTTCGTGGTGCCATGATCCTCA CGACATCGCTACGTCTGTTTGAACACTCTTGCATGAACACCTCATGAAAG CTGCTCATGTTTTTAGGGGAGGTGGGCGACTTCAGCTCATGCCTTCATGC GGTCTTCACTCCCAGTCGTGCTTTTGACAGCAAAGAAGATGCAGAGTTCG CCACGTTTTGCGTGCTTGTCGGCAAGTACATCAAGGATGGTTCGCCATTC GAAGTCAATATCGAGAGCAAGACCAAAATCGCTCTTCTAAGGATCACCGA CAGGGACACGTTCAACAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig177:340944..344012+

>mRNA_P-littoralis_Contig177.68.1 ID=mRNA_P-littoralis_Contig177.68.1|Name=mRNA_P-littoralis_Contig177.68.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1032bp|location=Sequence derived from alignment at P-littoralis_Contig177:340944..344012+ (Pylaiella littoralis U1_48)
AGGTCGCCCAGACTGGCGACTCTGTCGGGTTGCACGGGTATCACAATATC
TTCCGTCGCCATAGTCCGGAAGATACTGGGCTTCTGGCCTGAAGATGGCG
CGTGGGACCTGTACGGGACATTGATGGCGTTGCTGCTGTACACCGCGGCG
TACGACTTCCGGGGCATTCGACTGCTCGTCATGTACAATCCTCACTCTCG
GCAGCGCTGGGGACGTTTCATCAAAGACGCGCTCATGACGAAGATCTTGC
TGGTCTCCTTCGTGGTTCTCTCGATGCTGGTCTCGATTCTCTGCCTTTTT
TACGGAATAAAGAGGCGAGGAGCGAGCCAATACCTCTTAGCTTACGTGGC
AGATGTCATACTTCGAAGTATATCTATCTCAATGCTCGAGTTCGCTAAGC
TGAGGAAGACGAACGACATGTTTCAAATGTCGCCGGAGGTGCGGTTGTTC
ATCGTCTTCGACCTTCTTTCCCTGGCCGCTTACATCGCATTTTCTTGGCG
GTACGTCATGGTCGCGTTCATGATGACACGGTTCCAGCCTGCCGTGTGGT
TGACCAACATCCAACCCGTACGGGCTGCACTTCAGCGGGAGGCCGGAGGA
AAGCACAACGAAGGCAACCTTTTGGCTTCATTTTTCCCTTGGCAACCGTG
GCGGAAAGGCAAGACCAGCAAAGTTGCGATCGGCCGGCAAGACAAGACAC
ACCCGCCCACTTGCGGTGGTAGCGGAACATGCTGCGTGATTACCACCATC
ATGCAATCCCCCCCACATCTTGAAGCCTTCGAAGACTTCTGCCGTAAGGC
CCTCTGCAGCGAGCTGCTCATGTTTTTAGGGGAGGTGGGCGACTTCAGCT
CATGCCTTCATGCGGTCTTCACTCCCAGTCGTGCTTTTGACAGCAAAGAA
GATGCAGAGTTCGCCACGTTTTGCGTGCTTGTCGGCAAGTACATCAAGGA
TGGTTCGCCATTCGAAGTCAATATCGAGAGCAAGACCAAAATCGCTCTTC
TAAGGATCACCGACAGGGACACGTTCAACAAG
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