prot_P-littoralis_Contig177.58.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig177.58.3
Unique Nameprot_P-littoralis_Contig177.58.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length436
Homology
BLAST of mRNA_P-littoralis_Contig177.58.3 vs. uniprot
Match: A0A6H5JVW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW6_9PHAE)

HSP 1 Score: 461 bits (1186), Expect = 1.380e-157
Identity = 268/448 (59.82%), Postives = 307/448 (68.53%), Query Frame = 0
Query:    1 MAFFVGDLVVSVSGCSLDDKEGRLLDPCVELSVGNKLHSTRLPVNHSDGVHAEGGRNPGGKRASPSPAAAVAFHGVTEGDVLTITVLDRSPSSATTAPDGRSAPPFIAEAEPLRCTHWGAGGRPTRRTCVVLPPRE-EEGAQGSXXXXXXXXXXXXXXXXXXXXXP------GVSTVQVAICWSPAIRLRRPLALLARAGSLTGRRISRKIDGPVAAVLDLGLGAAEKASDLMVFRSPWWRAAAVLASAASLSVGSAFLAAWAAFFLPVALALSAATVAALATFAPPVLAFCWVLACTRPACEQLWRPLLVWAGTRWGFLRDALLLPVEVGGARGRRVESGGEEWEGGDRGVLLGGHEASLVDGEDSQRSLQASSLAEGQQAEEPPNAMIPLG------RGGGGRGNGGALTSVTDAGAVVLLLACYQNLIGVLHTGLKASRWRPHPR 435
            M FFVGDLVVSVSGC +D+  G LL+PCVELSVGNKLHSTRLPV    G   EG      +R+S     AVAFHGVTE DVL +TVLDRS   ++ APDGR+ P ++AEA+PLRCTHWG+GGRPTRRTCVV PP E +E A G                             G STVQ+AICWSPAIRL+RPL+L+ARAG LT R +SRKID P AAVL+LGLG AEKASD  +F  P  +AAA++A A S+S+GSA + A AA FLPV LALSAA  A  AT  PP LA  WV ACT PACEQLWRPLLVW GTRWG  R  LLLP+E+        ES GE  +GGDRGVLL G E S +  E ++R L   S A+G+QAEE PNA+IP+G      RGGG R  G A     DAGAVVLLLACYQNLIGVLH+GL+ASRWRP PR
Sbjct:    1 MTFFVGDLVVSVSGCCIDENAGPLLNPCVELSVGNKLHSTRLPVESRGGTVGEGEGASRKRRSS-----AVAFHGVTERDVLMVTVLDRSSPPSSAAPDGRTRPLYVAEAKPLRCTHWGSGGRPTRRTCVVAPPEEAQELASGGSAVDRDGGDPRGRGGATSGVGSEVLRRGGESTVQLAICWSPAIRLKRPLSLVARAGRLTARVVSRKIDRPAAAVLNLGLGGAEKASDFFLFGDPRLKAAALVAFAVSMSLGSAVVVAAAACFLPVMLALSAAAAATFATLGPPALALTWVFACTGPACEQLWRPLLVWTGTRWGLFRRLLLLPLEI------EAESLGEGGDGGDRGVLLKGLETSAMGEETARRWLPPPSAADGRQAEEKPNAIIPVGGEGSQERGGGVRNGGNA----ADAGAVVLLLACYQNLIGVLHSGLEASRWRPRPR 433          
BLAST of mRNA_P-littoralis_Contig177.58.3 vs. uniprot
Match: D7FN99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN99_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 3.000e-80
Identity = 162/289 (56.06%), Postives = 182/289 (62.98%), Query Frame = 0
Query:   22 GRLLDPCVELSVGNKLHSTRLPVNHSDGVHAEGGRNPGGKRASPSPAAAVAFHGVTEGDVLTITVLDRSPSSATTAPDGRSAPPFIAEAEPLRCTHWGAGGRPTRRTCVVLPPRE-EEGAQGSXXXXXXXXXXXXXXXXXXXXXP------GVSTVQVAICWSPAIRLRRPLALLARAGSLTGRRISRKIDGPVAAVLDLGLGAAEKASDLMVFRSPWWRAAAVLASAASLSVGSAFLAAWAAFFLPVALALSAATVAALATFAPPVLAFCWVLACTRPACEQLWRPLL 303
            G LL+PCVELSVGNKLHSTRLPV  S GV    G     KR S    +AVAFHGVTE                         PP++AEA+PLRCTHWG+GGRPTRRTCVV P  E +E A G+                            G STVQ+AICWSPAIRL+RPL+L+ARAG LT   +SRKID P AAVL+LGLG AEKASD + F  P  +AAA++ASA SLS+GSA + A AA FLPV LALSAA  A  AT APP LA  WV ACT PACEQLWRPLL
Sbjct:   19 GPLLNPCVELSVGNKLHSTRLPVE-SRGVTVGEGEGASRKRRS----SAVAFHGVTE------------------------RPPYVAEAKPLRCTHWGSGGRPTRRTCVVAPLEEVQELASGASAVGRNGVDPRGRGGANSGGWSEVVRRGGESTVQLAICWSPAIRLKRPLSLVARAGRLTAHVVSRKIDRPAAAVLNLGLGGAEKASDFLFFGDPRLKAAALVASAVSLSLGSAVVVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQLWRPLL 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.58.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVW6_9PHAE1.380e-15759.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN99_ECTSI3.000e-8056.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:310640..320977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.58.3mRNA_P-littoralis_Contig177.58.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig177 310611..321854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig177.58.3 ID=prot_P-littoralis_Contig177.58.3|Name=mRNA_P-littoralis_Contig177.58.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=436bp
MAFFVGDLVVSVSGCSLDDKEGRLLDPCVELSVGNKLHSTRLPVNHSDGV
HAEGGRNPGGKRASPSPAAAVAFHGVTEGDVLTITVLDRSPSSATTAPDG
RSAPPFIAEAEPLRCTHWGAGGRPTRRTCVVLPPREEEGAQGSGGGGARA
RAQPRAGARAGAGGPGVSTVQVAICWSPAIRLRRPLALLARAGSLTGRRI
SRKIDGPVAAVLDLGLGAAEKASDLMVFRSPWWRAAAVLASAASLSVGSA
FLAAWAAFFLPVALALSAATVAALATFAPPVLAFCWVLACTRPACEQLWR
PLLVWAGTRWGFLRDALLLPVEVGGARGRRVESGGEEWEGGDRGVLLGGH
EASLVDGEDSQRSLQASSLAEGQQAEEPPNAMIPLGRGGGGRGNGGALTS
VTDAGAVVLLLACYQNLIGVLHTGLKASRWRPHPR*
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