mRNA_P-littoralis_Contig177.49.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Match: D7FN77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN77_ECTSI) HSP 1 Score: 739 bits (1909), Expect = 1.810e-254 Identity = 388/546 (71.06%), Postives = 454/546 (83.15%), Query Frame = 1
Query: 31 MEASIEADIPKIDLAKIEEFESKRCGYFNDEYRKSSLYWSCVCSLMTENAGSTQQVLTYMAGKLETDRIYTSSVYANADRVFGDKKGAAKLRHDKIRHADTQAKLHGKAASVNEDSLLAGGGGREAGAQPPNGPVKAVWEMAEMDCRAARERDVLCDVLEQEDHLGAVKVMGKEMQRRSKELTDEGDACLLSLVNINKRVGQAFLHLKETLGDQLGGKNLHEDVWFLDCAYRTAVVHQKEAWNAVTARLREVFNKMKDLECERRQVLRDFMVAATAATSESWSKLHELCQPACDSASAVDASRGTVDAEVSSLAVMGMEEKKREPTKEHELANTTHIVPASPAPSDVSFVDTLSAPLESPMVRTIMMIERREGKAIGSKYHAGLMVLSWAGFIHFFDVPASSNVKQDASPAAAFQEISPTISLDDLLSNKKDLEEVLMFKSTHTLQLDESATASAVSSNKSHKLEVKGQTQLTSIKRHFTSGGTASKTVTFRTATEAEMNHALEEITDSICIRGGMQDAMNERQSIGSRSSFGSSFNSN-PGSGKL 1665
ME SIE ++P+ DLAK+EEFESKR GYF DEYRKSS+YWS +C +M+ N G TQQVL+Y+AGKLE DRI T++++ NAD+VFG+KKGA KLRHDKIRH + +AK G AS++ + L+AGG G+EA P N VKA+WEMAEMDCRAAR RD LCD LE ED LG VKVMGKEMQRR KEL++EG ACLLSL NI+KRVGQAFLHLKETLGDQ+GGK LHEDVWFL C+Y+TAVVHQKEAWNAVTA+L EVF KMKDLE ERR LR+FM++A A ++W K+ L PA D+A AVDASRG VD EV SLA + MEEKK + +KEH LANTTHIV A PAP+D SF++TLSAPLESP+VR++MMIERREGKAIGSKYHAGLMVLSW GF+HFFD+P+SS VK+DAS +AAFQEISP+ISLDDLL+NKKDL+EVLMFKSTHTL+LDES+T A SS+KSHK+EVKG+ +TSIKRHF G++SKTVTFRTATEAEMN+ +EEITD I RGGMQ A+ R S SRSSFGSSFNS GS KL
Sbjct: 1 MEPSIEKELPRADLAKVEEFESKRSGYFADEYRKSSMYWSSLCDVMSANDGPTQQVLSYVAGKLEADRINTAAIFVNADKVFGEKKGATKLRHDKIRHEEQKAKTKGVTASIDVELLVAGGPGKEA---PTNSAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANHAIGDNWKKMCTLSGPANDAAKAVDASRGAVDQEVHSLAAVRMEEKKHDSSKEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSISLDDLLANKKDLDEVLMFKSTHTLRLDESSTVEAKSSHKSHKIEVKGKMNITSIKRHF---GSSSKTVTFRTATEAEMNNTVEEITDCIYTRGGMQTALTGRMSTDSRSSFGSSFNSTGSGSTKL 540
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Match: A0A6H5L7U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U6_9PHAE) HSP 1 Score: 725 bits (1872), Expect = 3.940e-250 Identity = 384/550 (69.82%), Postives = 454/550 (82.55%), Query Frame = 1
Query: 31 MEASIEADIPKIDLAKIEEFESKRCGYFNDEYRKSSLYWSCVCSLMTENAGSTQQVLTYMAGKLETDRIYTSSVYANADRVFGDKKGAAKLRHDKIRHADTQAKLHGKAASVNEDSLLAGGGGREAGAQPPNGPVKAVWEMAEMDCRAARERDVLCDVLEQEDHLGAVKVMGKEMQRRSKELTDEGDACLLSLVNINKRVGQAFLHLKETLGDQLGGKNLHEDVWFLDCAYRTAVVHQKEAWNAVTARLREVFNKMKDLECERRQVLRDFMVAATAATSESWSKLHELCQPACDSASAVDASRGTVDAEVSSLAVMGMEEKKREPTKEHELANTTHIVPASPAPSDVSFVDTLSAPLESPMVRTIMMIERREGKAIGSKYHAGLMVLSWAGFIHFFDVPASSNVKQDASPAAAFQEISPTISLDDLLSNKKDLEEVLMFKSTHTLQLDESATASAVSSNKSHKLEVKGQTQLTSIKRHFTSGGTASKTVTFRTATEAEMNHALEEITDSICIRGGMQDAMNERQSIGSRSSFGSSFNSN-PGSGKLSTGE 1677
ME SIE ++P+ DLA+IEEFESKR GYF DEYRKSS+YWS +C +M+ N G TQQVL+Y+AGKLE DR+ T++++ANAD++F +KKGA KLRHDKIRH + +AK G AS++ + L+AGG +EA P N VKA+WEMAEMDCRAAR RD LCD LE ED LG VKVMGKEMQRR KEL++EG ACLLSL NI+KRVGQAFLHLKETLGDQ+GGK LHEDVWFL C+Y+TAVVHQKEAW+AVTA+L EVF KMK+LE ERR LR+FM++A A ++W L L PA D+A+AVDA+RG VD EV SLA + MEEKK E +KEH LANTTHIV A PAP+D SF++TLSAPLESP+VR +MMIERREGKAIGSKY+AGLMVLSW GF+HFFD+P+SS VK+DAS +AAFQEISP+ISLDDLL+NKKDL+EVLMFKSTHTL DES+T A SS+KSHK+EVKG+T +TSIKRHF SG T SKTVTFRTATEAEMN+ +EEITD I RGGMQ A+ R S SRSSFGSSF+S GS KL+T +
Sbjct: 1 MEPSIEKELPRADLAEIEEFESKRSGYFADEYRKSSMYWSSLCDVMSLNDGPTQQVLSYVAGKLEADRVNTAAIFANADKLFDEKKGATKLRHDKIRHEEQKAKTKGVTASIDVELLVAGGPEKEA---PTNNAVKAIWEMAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWDAVTAKLGEVFAKMKNLEGERRTTLREFMLSANRAIGDNWKTLCTLPGPASDAATAVDANRGAVDQEVHSLAAVRMEEKKHETSKEHVLANTTHIVRADPAPADDSFIETLSAPLESPLVRKMMMIERREGKAIGSKYYAGLMVLSWDGFLHFFDIPSSSTVKRDASASAAFQEISPSISLDDLLANKKDLDEVLMFKSTHTLWFDESSTVEAKSSHKSHKIEVKGRTNITSIKRHFGSG-TTSKTVTFRTATEAEMNNIVEEITDCIYTRGGMQTAVTGRMSTDSRSSFGSSFSSTGSGSTKLATAQ 546
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.980e-21 Identity = 84/314 (26.75%), Postives = 132/314 (42.04%), Query Frame = 1
Query: 88 FESKRCGYFNDEYRKSSLYWSCVCSLMTENAGSTQQVLTYMAGKLETDRIYTSSVYANADRVFGDKKGAAKLRHDKIRHADTQAKLHGKAASVNEDSLLAGGGGREAGAQPPNGPVKAVWEMAEMDCRAARERDVLCDVLEQEDHLGAV----KVMGKEMQRRSKELTDEGDACLLSLVNINKRVGQAFLHLKE-------------------TLGDQLGGKNLHEDVWFLDCAYRTAVVHQKEAWNAVTARLREVFNKMKDLECERRQVLRDFMVAATAATSESWSKLHELCQPACDSASAVDASRGTVDAEV 960
FE +R +F ++Y SLYW C L+ + + ++ ++Y KL Y S+YA DRV + G + +K R + K + + G G +AG PP P A+ + EM+ A +C QE H+ + M K++ R E+ +G ACL + + +A+ +E TL D G D+W D YR AV Q W V+A+L ++F KMKD+E ERR+ ++ + A W L L P + ++ R +D EV
Sbjct: 142 FEQRRHSHFGEKYDGDSLYWKCFVELIRRSQANNRRAISYATQKLSATHAYAKSLYAIRDRVDSLEPGTTEALREKERRKNNHKKWPPQQLPLPPQQRR--GSGTDAGGLPPQ-PASALDCLFEMEEWTAMRTIDMC----QEAHVTVIDNQLNAMVKKLDERFAEMVGQGTACLRLMHSAEMNSVKAYGRYQEIVTASLEREASPARATAPLTLRDVAGS-----DIWLADMNYRVAVTQQARVWKGVSAKLGDLFGKMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEV 443
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 1.620e-13 Identity = 87/348 (25.00%), Postives = 142/348 (40.80%), Query Frame = 1
Query: 391 GGGREAGAQPPNGPVKAVWEMAEMDCRAARERDVLCDVLEQEDHLGAV----KVMGKEMQRRSKELTDEGDACLLSLVNINKRVGQAFLHLKETLGDQLGGK----------NLHE----DVWFLDCAYRTAVVHQKEAWNAVTARLREVFNKMKDLECERRQVLRDFMVAATAATSESWSKLHELCQPACDSASAVDASRGTVDAEV-------SSLAVMGMEEKKREPTKEHELANTTHIVPASPA---------------------PSDVSFVDTLSAPLESPMVRTIMMIERREGKAIGSKYHAGLMVLSWAGFIHFFDVP---ASSNVKQDASPAAAFQEISP 1287
G G + G PP P A+ + EM+ A +C QE H+ + M K++ R E+ +G ACL + + +A+ +E + LG + L + DVW D YR AV Q W V+A+L ++F +MKD+E ERR+ ++ + A W L L +P + ++ R +D EV ++ + G +E PA P+D F+ L +PL S ++ M+ERRE I S++ L +L+ ++ FDVP A+ + +A + AF E+ P
Sbjct: 199 GSGTDGGGLPPQ-PASALDCLFEMEEYTAMRTIDMC----QEAHVTVIDKQLNAMVKKLDDRFAEMVGQGTACLRLMHSAEMNSAKAYGRYQEVVTASLGREASPARATAPLTLRDVAGSDVWLADMNYRVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGAGXXXXXXXXXXXXXXPAGXXXXXXXXXXXXGGGSVERSETMPAD--FLAGLESPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVPRGTAAHKKQLNARTSEAFAELVP 539
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Match: A0A7S1FLP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FLP4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 6.320e-9 Identity = 52/199 (26.13%), Postives = 87/199 (43.72%), Query Frame = 1
Query: 712 DCAYRTAVVHQKEAWNAVTARLREVFNKMKDLECERRQVLRDFMVAATAATSESWSKLHELCQPACDSASAVDASRGTVDAEVSSLAVMGMEEKKREPTKEHELANTTHIVPASPAPSDVSFVDT-----LSAPLESPMVRTIMMIERREGKAIGSKYHAGLMVLSWAGFIHFFDVPASSNVKQDASPAAAFQEISPTI 1293
D YR +V W A L +F +MK+ EC RR+VLR + A W + + + +AS V+ EV + + + RE + + +P + PS+ F D L +PL S ++ +IER+ G+ K L +++ F+H FD+PA S ++ + AFQ + P +
Sbjct: 1 DMRYRMSVAFLSACWEKCQAALAAIFLRMKEDECRRRRVLRAAVAAFLRQQGVLWEGVRDAFAEGVPDRALQEASPEEVEREVQAA----IRRRAREIRLQEQENGEEEPLPVATVPSEDEFTDEDRVIELDSPLTSKLLGKAKVIERKPGRLAAWK--TTLAIVTTDSFLHLFDMPAFSGIRNGTATEVAFQRLVPKL 193
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Match: A0A7S2P3G9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3G9_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 5.070e-6 Identity = 62/259 (23.94%), Postives = 103/259 (39.77%), Query Frame = 1
Query: 643 LHLKETLGDQLGGKNLHEDVWFLDCAYRTAVVHQKEAWNAVTARLREVFNKMKDLECERRQVLRDFMVAATAATSESW-------------------------SKLHE-----------------LCQPACDSASAVDASRGTVDAEVSSLAVMGMEEKKREPTKEHELANTTHIVPASPAPSDVSFVDTLSAPLESPMVRTIMMIERREGKAIGSKYHAGLMVLSWAGFIHFFDVPASSNVKQDASPAAAFQEISPTI 1293
L+ LG+ N D+W + YR AV WN +A L ++FNK+KD+E ERR LR+ M+ W LH+ L + A + A + R + +SS ++ + E K +L N HIVPA D ++ +S+PL S ++ ++ R+ I + + L + + ++HFFDV +S+ Q + F E+ P +
Sbjct: 238 LYENSKLGEPDDQPNQWNDMWLHEARYRVAVGLLSSCWNKCSATLSKLFNKVKDVEVERRICLRELMIQLMQRQEVEWMGLSSTGAGVLVNLASTSIEPAVIHQGLHDAIRREAKKNAQKERERILQERAQNDRDADSSQRSINNLRISSSSIPELLENK---ISSDDLDND-HIVPAR---KDEIMME-ISSPLSSELLGAAQVLRRKRCSGIFKSWRSTLAITTADQYLHFFDVNCNSSSNQWKTAEMTFNELMPDV 488 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig177.49.1 >prot_P-littoralis_Contig177.49.1 ID=prot_P-littoralis_Contig177.49.1|Name=mRNA_P-littoralis_Contig177.49.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=636bp MEASIEADIPKIDLAKIEEFESKRCGYFNDEYRKSSLYWSCVCSLMTENAback to top mRNA from alignment at P-littoralis_Contig177:262137..288343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig177.49.1 ID=mRNA_P-littoralis_Contig177.49.1|Name=mRNA_P-littoralis_Contig177.49.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=26207bp|location=Sequence derived from alignment at P-littoralis_Contig177:262137..288343+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig177:262137..288343+ >mRNA_P-littoralis_Contig177.49.1 ID=mRNA_P-littoralis_Contig177.49.1|Name=mRNA_P-littoralis_Contig177.49.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1908bp|location=Sequence derived from alignment at P-littoralis_Contig177:262137..288343+ (Pylaiella littoralis U1_48)back to top |