prot_P-littoralis_Contig177.47.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig177.47.1
Unique Nameprot_P-littoralis_Contig177.47.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length313
Homology
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: D7FN76_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 6.450e-67
Identity = 118/133 (88.72%), Postives = 125/133 (93.98%), Query Frame = 0
Query:   44 QTGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHGGPSEELTEVEEELTKKNEGESKKM-VSSFDMEGGGAMG 175
            Q GFWTAFANSVAMIIATEIGDKTFFIAAIMAMS+PRLAVFGGAVGALAVMTVLSAALG+ALPA LP+TYTHYASALLFLYFG RMLKEGMESHGGPSEELTEVEEEL KK EGE+KK   ++FDMEGGGA+G
Sbjct:   45 QVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIG 177          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A6H5KTH0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH0_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 4.120e-65
Identity = 125/151 (82.78%), Postives = 136/151 (90.07%), Query Frame = 0
Query:   44 QTGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHGGPSEELTEVEEELTKKNEGESKKM-VSSFDMEGGGAMGXXXXXXXXGADSRRSGSA 193
            Q GFWTAFANSVAMIIATEIGDKTFFIAAIMAMS+PRLAVFGGA+GALAVMTVLSAALG+ALPA L +TYTHYASALLFLYFG RMLKEGMESHGGPSEELTEVEEEL KK EGE+KK   ++FD+EGGGA+G XXXXXXX    RR+ +A
Sbjct:   45 QVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAIGALAVMTVLSAALGYALPAVLSRTYTHYASALLFLYFGCRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDLEGGGAIGGXXXXXXXXXXXRRASTA 195          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A836CAP1_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.760e-39
Identity = 80/107 (74.77%), Postives = 89/107 (83.18%), Query Frame = 0
Query:   46 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESH-GGPSEELTEVEEEL 151
            GFW  F + V MIIATEIGDKTFFIAAIMAM Y R+ VF GA+ ALA+MTVLSAALGFALP  LP+ YTHYA ALLFLYFG++MLKEG E+  GGPSEEL EVE+EL
Sbjct:   91 GFWGGFVSGVGMIIATEIGDKTFFIAAIMAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYAGALLFLYFGVKMLKEGFEADDGGPSEELAEVEQEL 197          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A7S2HJF0_9STRA (GDT1 family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.350e-37
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 0
Query:   38 PLAAD-DQTGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHGG-PSEELTEVEEELTKKNE 156
            PL  D D   FW AF NS  MII TEIGDKTFFIAA++AM + R A+F GAV ALA+MTVLSAA+GFALP  LP+ YTHYASALLFLYFG+R+LK+  E  GG PS+EL EVEEEL  K +
Sbjct:  106 PLVGDLDSKSFWAAFINSWLMIIVTEIGDKTFFIAAVLAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYASALLFLYFGIRLLKDASEMRGGGPSDELQEVEEELISKKD 226          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A4D9CVK3_9STRA (GDT1 family protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK3_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.950e-35
Identity = 74/114 (64.91%), Postives = 91/114 (79.82%), Query Frame = 0
Query:   46 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKE--GMESHGGPSEELTEVEEELTKKNEG 157
            GFW AF NS++MI+ TE+GDKTFFIAA++AM Y RL +FGGA+ AL +MT+LSAA+G  LP  LP+ YTHYASALLFLYFG++++ E  GME   GPS+EL EVEEEL  K EG
Sbjct:  104 GFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAISALIIMTILSAAIGNVLPNVLPRIYTHYASALLFLYFGIKLIVEARGMEG-SGPSDELQEVEEELIHKKEG 216          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A7S3UU97_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU97_HETAK)

HSP 1 Score: 136 bits (343), Expect = 1.280e-34
Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = 0
Query:   47 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEG--MESHGGPSEELTEVE 148
            F  AF  SV MI+ATE+GDKTFFIAAI+AM + R  +FGGA+GALA+MTVLS  +GFALP+ +P+TYTHYASALLFLYFG+R+LK+G  ME  GGPSEEL EVE
Sbjct:   64 FMPAFVKSVLMIVATELGDKTFFIAAILAMRHSRFLIFGGAIGALALMTVLSTLMGFALPSLIPRTYTHYASALLFLYFGVRLLKDGAGMEG-GGPSEELAEVE 166          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A7S1CD49_9STRA (GDT1 family protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD49_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.310e-34
Identity = 74/111 (66.67%), Postives = 86/111 (77.48%), Query Frame = 0
Query:   47 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHGG-PSEELTEVEEELTKKNE 156
            FW +F NSV MII TE+GDKTFFIAAI+AM Y R  VFGGA+GALA+MT LSAA+G+ALPA LPKTYTHYA+  LF YFG ++LKE  E   G P+EEL E E EL  K+E
Sbjct:  129 FWASFGNSVIMIIVTELGDKTFFIAAILAMQYDRAPVFGGAIGALALMTALSAAIGWALPAILPKTYTHYAAVALFAYFGAKLLKEAREMKDGEPNEELEEAERELGVKDE 239          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: F0Y333_AURAN (GDT1 family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 134 bits (338), Expect = 1.510e-34
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0
Query:   47 FWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHG-GPSEELTEVEEEL 151
            F  AF NS+ MI ATEIGDKTFFIAAI+AM + RL +F GAV ALAVMTVLSAA+G+ALPA +P+TYTHYASALLF YFG RMLK+     G G SEEL EVEEEL
Sbjct:    1 FAAAFVNSMGMIWATEIGDKTFFIAAILAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEEL 106          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A8J2SNL4_9STRA (GDT1 family protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNL4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.750e-34
Identity = 83/129 (64.34%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   46 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHGGP-SEELTEVEEELTKKNEGESKKMVSSFDMEGGGA 173
            GF  AF NS+ MI ATE+GDKTFFIAAI+AM + RL VF GA+GALAVMTVLSA LG ALP+ LP+TYTHYASA LFLYFGLR+L++      G  SEEL EVEEEL     G  KK  +  D E GGA
Sbjct:   81 GFARAFVNSMGMIWATEVGDKTFFIAAILAMRHARLVVFAGALGALAVMTVLSALLGLALPSLLPRTYTHYASAGLFLYFGLRLLRDARSMETGTVSEELEEVEEEL---GVGAGKKQDAPGDAEAGGA 206          
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Match: A0A7S2RJT4_9STRA (GDT1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.180e-33
Identity = 74/112 (66.07%), Postives = 85/112 (75.89%), Query Frame = 0
Query:   46 GFWTAFANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAALGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHG-GPSEELTEVEEELTKKNE 156
            GFW AF NS  MII TE+GDKTFFIAA++AM   R AV+ GAVGALA MTVLSA +GF LP  LP+ YTHYASA LF+YFG ++LKE  E  G GPS+EL EVE+EL  K E
Sbjct:  112 GFWAAFLNSFLMIIVTELGDKTFFIAAVLAMRQDRWAVYLGAVGALAAMTVLSAIMGFMLPNLLPRQYTHYASAALFVYFGFKLLKEASEMEGDGPSDELQEVEDELIHKKE 223          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN76_ECTSI6.450e-6788.72GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTH0_9PHAE4.120e-6582.78GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A836CAP1_9STRA2.760e-3974.77GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2HJF0_9STRA5.350e-3766.94GDT1 family protein n=1 Tax=Dictyocha speculum Tax... [more]
A0A4D9CVK3_9STRA5.950e-3564.91GDT1 family protein n=1 Tax=Nannochloropsis salina... [more]
A0A7S3UU97_HETAK1.280e-3470.19GDT1 family protein n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S1CD49_9STRA1.310e-3466.67GDT1 family protein n=1 Tax=Bicosoecida sp. CB-201... [more]
F0Y333_AURAN1.510e-3471.70GDT1 family protein (Fragment) n=1 Tax=Aureococcus... [more]
A0A8J2SNL4_9STRA1.750e-3464.34GDT1 family protein n=2 Tax=Pelagomonas calceolata... [more]
A0A7S2RJT4_9STRA1.180e-3366.07GDT1 family protein n=1 Tax=Rhizochromulina marina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 54..126
e-value: 6.2E-21
score: 74.5
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 44..179
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 62..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..163
NoneNo IPR availablePANTHERPTHR12608:SF1TRANSMEMBRANE PROTEIN 165coord: 44..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:250089..261452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.47.1mRNA_P-littoralis_Contig177.47.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig177 246501..261630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig177.47.1 ID=prot_P-littoralis_Contig177.47.1|Name=mRNA_P-littoralis_Contig177.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=313bp
MGAVRGRAAAGGVLMAVLAGLAVLDLALAQESRKDSPPLAADDQTGFWTA
FANSVAMIIATEIGDKTFFIAAIMAMSYPRLAVFGGAVGALAVMTVLSAA
LGFALPAFLPKTYTHYASALLFLYFGLRMLKEGMESHGGPSEELTEVEEE
LTKKNEGESKKMVSSFDMEGGGAMGGGGGNGSNGADSRRSGSAKALSEVK
KLGLCDHEGVHDDVLGGVGGPVSDRDDRARDDQGPVRRHGGGGDRALAVH
GHSGYRGANAGRTDLGEDCPPARRSLVPRLRVARTFVRGVKHALASKEIV
GVVGRLSCGSHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1