prot_P-littoralis_Contig177.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig177.7.1
Unique Nameprot_P-littoralis_Contig177.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length402
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig177.7.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 1.330e-68
Identity = 139/239 (58.16%), Postives = 153/239 (64.02%), Query Frame = 0 
Query:  170 DGGVALWLDMRTAVLPAAQTLKSLYDELRQREESLGRGPDDPDWSLSRVPNPVGALLYAAEPVERASEEMKALGAGGSGGGGLPCFRLSGTDETRIF-DVSSGDVVGVGFDPTGGEIGGNQAMEIVAAAQQGDSG------NLVFLQGARPSVWDDGGMGTVLQIAASACAEAGKTLVVTVRSVGQLHDAAMAAFAASQTQMLGARPASGKGTSEGRSPAMALLIEPTAELWEAGLLYL 401
            D GVALWLDMRTAVLPAAQTLK+LY ELRQREE+LGR P+D DW+LSRVPNPVGALLYAAEP ERA+EEM ALG   +    LPCFRL GTD T +  DVSSG VVGV  DP G    G                       LVFL G RPSVW+ G MGTVL+IA+SACA AGKTLVVT   +G                 +G   A+  GT+    P MALLIEP  ELWEAGLLYL
Sbjct:  102 DSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAA---LPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVTTTVLG-----------------VGGTGAAEDGTTP---PPMALLIEPMPELWEAGLLYL 317
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI1.330e-6858.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:48904..50109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.7.1mRNA_P-littoralis_Contig177.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig177 48645..52934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig177.7.1 ID=prot_P-littoralis_Contig177.7.1|Name=mRNA_P-littoralis_Contig177.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=402bp
MRLKAWHVLGLLSKASSSPIGYHDLQLIQTSAGCQSHRALESPTSTTRTR
AETSATAAQSGIALCTFVRPPLLFSSSFAPTAATSSVCGHNFAATTRCYY
RPQHGRQPNTPSTWLSPRFKSSRVGGGTRNIQDASSAFVVMSGRNPTENA
NNSPPIGASSSGGGGGEGGDGGVALWLDMRTAVLPAAQTLKSLYDELRQR
EESLGRGPDDPDWSLSRVPNPVGALLYAAEPVERASEEMKALGAGGSGGG
GLPCFRLSGTDETRIFDVSSGDVVGVGFDPTGGEIGGNQAMEIVAAAQQG
DSGNLVFLQGARPSVWDDGGMGTVLQIAASACAEAGKTLVVTVRSVGQLH
DAAMAAFAASQTQMLGARPASGKGTSEGRSPAMALLIEPTAELWEAGLLY
L*
back to top