mRNA_P-littoralis_Contig177.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig177.3.1
Unique NamemRNA_P-littoralis_Contig177.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE)

HSP 1 Score: 744 bits (1920), Expect = 5.830e-256
Identity = 466/717 (64.99%), Postives = 503/717 (70.15%), Query Frame = 3
Query:  102 MGSPCPTLLSILAIALSLSRVCPLSIP--SLTTGTFRGDSRGSSCSXXXXXXXXXXSSIGTRRRQQPHQHVVAMAATAMMSRVREGSPL-LVADERAVTLSCSRSRSSRGSRKPHRQLGHARRCLATLAAAADGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGADIVPSAISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTA-----HGADAVAGELGP------AGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGR---------------------GGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
            M  P   LLS+LAI   LS V PLS P  S TTG  RG +  S+ S          SS   R R +P Q+ V     A  +    G  L +V  ER   L   RS  S   R+   ++ H                 XXXXXXXXXXXX                      A  AD  P  ++ G    TFRELF GRLPDWLLTRLEQLGFA PTLVQRQAL+VIL + K+DAVLHAQTGSGKTLAFLLPL A VDPSR+AVQGLVVVPTRELGLQVAGVAKRLAAGT SGR +KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESL+RLVTTGAVRVNAVSYVVVDEVDACLLSE TRA LHELLARSLSPTH +ED  EDE+E  RL  VGAGRVTGAAAP+ ++++DRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPP LSH YVVCPPEQKLAVLRALV+RELGV A  A      GA      LG       AG+G  D P+     GG VA    +ADTRGLVFAL TKPLE IAASLDKALGG G                               G     PP+AEFLREELGLNARAD MSLFREG+TRLLVSTDMAARGLDVPEITHVFNLDLP+DGEGYVHRGGRAGRLGRPGK+IS+VTP+QEFVIRRLGNGIGVDIKKI+LGSS+RR K
Sbjct:    1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTG-----SSRVVRCRHRPRQYTVVEEGGAEAA----GDSLSMVVGERRAAL--GRSSISSRQRRRSARVCHDATXXXXXXXXXXXXXXXXXXXXXXXXXXASQDSPAPLLDGGNVFSSTPNGAAAAD--PGPVNGG----TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEG--DSPSEGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 698          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI)

HSP 1 Score: 711 bits (1835), Expect = 8.620e-247
Identity = 382/516 (74.03%), Postives = 409/516 (79.26%), Query Frame = 3
Query:  660 TFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGG--------------------EGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
            TFRELF GRLPDWLL RLEQLGFA PTLVQRQAL+VIL +EK+DAVLHAQTGSGKTLAFLLPL   VDPSR+AVQGLVVVPTRELGLQVAGVAKRLAAGT SGR++KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESL+RLVTTGAVRVNAVSYVVVDEVDACLLSE TRA LHELLARSLSPTH +ED  EDE+  ARL  VGAGRVTGAAAP+ ++++DRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPP LSH+YVVCPPE+KLAVLR                                                    DTRGLVFAL TKPLE IAASLDKALGG G G                    +G  E+        PP+AEFLR+ELGLNARAD MSLFREG+TRLLVSTDMAARGLDVPEITHVFNLDLP+DGEGYVHRGGRAGRLGRPGK+IS+VTP+QEFVIRRLGNGIGVDIKKI+LGSS+RR K
Sbjct:    5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT---------------------------------------------------DTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXAKGWDEQ-----PPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 464          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA)

HSP 1 Score: 496 bits (1277), Expect = 7.130e-162
Identity = 287/524 (54.77%), Postives = 343/524 (65.46%), Query Frame = 3
Query:  639 SSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPI---KKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGG----------------------------AVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKI 2117
            SSG   +T+REL+  RLP WL+ RLE+LGFA PTLVQ++AL  IL    +DAVLHAQTGSGKTLAFL+PLFA +DPSR++VQGLVVVPTRELGLQVA VAKRLAA TG+    ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+LS LV  GAVR N V YVVVDEVDACL S   RA L  LLAR LSPT      +E+E EV +L   G   VTGAAA     ++RV+ RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H YV C P +KLA LRALVRRELG                            GDG      A        R LVFA   +PL+ +AA+LD  L           K RGGG                                P+A+ LRE+LGL  RAD ++ +R G  R+L++TD+AARGLDVPE THVF+ DLP D EGY+HRGGRA        ++SIVTP+QEFV++RL N +GV++ ++
Sbjct:   50 SSGLDGDTYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFA----QEEEAEVPQLP--GGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG----------------------------GDGXXXXXXA-------PRALVFAQANRPLDQMAAALDADL----------RKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVLQRLANAVGVEVAQL 520          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA)

HSP 1 Score: 372 bits (955), Expect = 1.400e-113
Identity = 235/573 (41.01%), Postives = 325/573 (56.72%), Query Frame = 3
Query:  606 AEGADIVPSAISSGG----STETFRELFEG-----RLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTG--SGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSE---------STRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPP-EQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFR--------------------------------------EGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
            A GA  V S+  + G    S E+F EL+        LP WL  R  + G+  PTLVQR++L  IL     D V+ AQTGSGKTL+FLLPL + +D SRSA+Q ++VVPTRELGLQ++ VA+RLAA +G  +    KI VM +L+GS NKRQRAWAWA+PPH+V+G P+ L+++V+ G +R NAV +VVVDEVDACLL+          ++   LHELL+R LSPT+   D  + +   A LV+  A  + G++  +     DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV     E +PP+LSH YVVC   E K   LR +++RE+              G L                              + LVF  P +PLE++AA++   L G+   E + +     G +       LR E  L+AR+  M+ FR                                       G  R+++STD+AARGLDV +++HV N DLP DG+ YVHRGGRAGRLGR G ++S++T +QEFV++RL N +G+ ++ ++    + RK+
Sbjct:   68 AVGARRVESSYETFGDAALSEESFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAILTG--MDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGDS--ASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREVR------------RGRL-----------------------------RKALVFCEPQRPLENMAAAIAADLNGTVWTESRNDDIEYAGVIV----SVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSKQGQDSGFIEDIDALNQEGVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVLQRLANKLGLAVQCVARQEKEGRKR 590          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO)

HSP 1 Score: 349 bits (895), Expect = 6.860e-106
Identity = 219/516 (42.44%), Postives = 297/516 (57.56%), Query Frame = 3
Query:  624 VPSAISSGGS---TETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVIL-DDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAV-RVNAVSYVVVDEVDACLLSES-----TRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLD-KALGGSGGGEGQQEKGRGGGAVAPPMA--EFLREELGLNARADTMSLFREGE---TRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKIS 2120
            + S   S G+   T+T  + ++ +LP WLL R + LG+  PT +Q  AL V+L D+ K D V+ A+TGSGKTL +LLP  A +DP+RS VQ ++VVPTRELGLQVA VAKRL A +     +KI +MSVL+GS N+RQRAWAWA+PP +VIG PE LS++V  G + R N++  VVVDEVDACLL+ +       + LHELL++ LS T  ++D  ED      + A+ + R        K+R+  RQT+  SAT+PQH HFI+QCVQ +WT TEPV V +   E + PP+L H Y+VC PE KLA L+   R+ L  P                                            + LVFA   +PLE +A +L  +A  G    E   +  +      P  A    LR +  L  RA  M  F   +    R+L STD+AARGLDV  +THV + DLP D + YVHR GR GRLGR G+++S V P+QEFV+ RL N + +D++ ++
Sbjct:   44 IASIYQSDGALDQTDTLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVED-----TMGALSSTRP-------KRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLLSSPV-----------------------------------------PFKVLVFAEEQRPLEEMALALAWEAEHGVYWQESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANVTHVIHFDLPPDADTYVHRAGRTGRLGRSGQVLSFVAPEQEFVLNRLANKLSLDLRCVA 502          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA)

HSP 1 Score: 349 bits (896), Expect = 1.070e-105
Identity = 226/535 (42.24%), Postives = 304/535 (56.82%), Query Frame = 3
Query:  651 STETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGT-GSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLL--------SESTRAW-------LHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPP-EQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADT--RGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFR--------------------------EGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKIS 2120
            S ETF E F   +P WL +R ++ G+  PTL+Q +A+  IL+D   D ++ AQTGSGKTL +LLPL + +DP+RS++QG++VVPTRELG+QVA VA+RLAAG+  S    KI VMSVL+GS NKRQRAWA +DPPH+VIG P  L  +V    ++ +AV +VVVDEVDACLL        S+S+++        LHELL+R LSPT    +  EDE+ + +L       V G  + I     DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V     E +PP+L H YVVC   EQK+  L  ++ +++                                     +    +K DT  R LVF  P + LE +A  L + L  S              +V    A  LR E   + R   M  FR                          +G+ R+L+STD+AARGLD+ +ITHV N DLP +G+ YVHRGGRAGRLGR G ++S++T +QEFV+ RL N +G+DIK I+
Sbjct:   55 SNETFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDGN-DVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQL-----SLVEGGGSRIVSHGTDRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQI-------------------------------------MKRKKSKLDTTCRVLVFCEPKRHLEEMAEILKRDLSKSLD------------SVYDVSASVLRYEDPTSVRMAAMEEFRGADTYLGGRIMDEVSEGDEKDTSQGVKGDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVLERLANKLGLDIKCIA 530          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA)

HSP 1 Score: 346 bits (887), Expect = 1.830e-103
Identity = 226/566 (39.93%), Postives = 311/566 (54.95%), Query Frame = 3
Query:  612 GADIVPSAISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAG---------------------------TGS-----GRNN-----KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEED--------EDEVARLVAVGA---------GRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPE-QKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRK 2144
            G +++  A + G + ETF +L+  RLP WLL R+E LG+  PT VQ++AL  IL+ E  D V+H+QTG+GKTLAF+LPL A +D +++AVQ LVVVP+RELGLQVA VAK+LA+G                            GS     G +N     KI +MS+LEGS N+RQ+AW  A+PPH+VIGNP SL++LV  G +R + V  VVVDEVDACL S  T   L  LL + LSP+    + EE+        +DE   L+  GA         GRV    AP K  +  RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V   E MPP L H Y+V P +  K A L A +RRE     + A                                          ++F    +  E +AA L ++ G + G  GQ+ +G      A    E +        RA  M  FR GE+  LV+TD AARGLDVP ++HV  LD+  + + Y+HRGGRAGR+GRPG ++S+V+  + F + RL N + ++++++ +    R +
Sbjct:  101 GKEMMHVAENDGTTAETFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAILEGE--DVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPWK--LVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQAC-----------------------------------------VIFTADDREAEKMAAILARSGGLAAG--GQEPRGESSVVQALVGGEHIAR------RAKVMDAFRAGESWGLVTTDFAARGLDVPRVSHVIMLDVAGEADTYLHRGGRAGRMGRPGWVVSLVSETEAFALVRLANSLKIEVRRMGVMKRPRSR 613          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC)

HSP 1 Score: 343 bits (880), Expect = 2.470e-102
Identity = 224/550 (40.73%), Postives = 302/550 (54.91%), Query Frame = 3
Query:  624 VPSAISSGG-STETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRN-----NKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAV-RVNAVSYVVVDEVDACLLSES-------TRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPSLSHFYVVC-PPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGS-----GGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFR-EGET----------------------RLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRR 2141
            V   +S G  S E+F   +   LP WL+ +  + G+  P+ +Q +AL  IL  E+ DAV+ A+TGSGKTLA+LLP  A +D SR+AVQ L+VVPTRELGLQVA VAKRLAA +    N      +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L  +V  G + R N+V ++VVDEVDACLL+ +         + LHELL++ LSPT+ +    E +D V R V       T  A   +     RQT+FASAT+PQH HF++QC Q QWTL EP HV +   ++ +P +L H Y VC   +QKLA LR LV +                       K + + P                   + LVF+   +PLE +A  L   + G      G G+ Q+   R        +   LR E  L+ RA  +  FR +G T                      R+L STD+AARGLD+ +I+HV + DLP D + YVHR GR GR GR G+++ I++P QEFV+ RL N + VD K I+    K+R
Sbjct:  120 VEEILSDGSLSAESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILF-ERRDAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTS----TKTATSTRPLSSQRQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYA--------------------KSVIEPPK------------------KVLVFSDARRPLEEMAQILANDIEGGMLWKDGYGKEQERDVR-------AVVAVLRYEDSLSQRAAAIDSFRGDGYTMASGASQTYTSRDNDSDTAPSLRVLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVLTRLTNKLNVDTKCIARQQKKKR 619          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA)

HSP 1 Score: 329 bits (843), Expect = 5.430e-98
Identity = 210/524 (40.08%), Postives = 285/524 (54.39%), Query Frame = 3
Query:  633 AISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTH----------TNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESI-AASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRK 2144
            A  SG   E+FR+L+   LPDWLL RLE+LGF  PTL Q  AL  +   E  D VLHAQTGSGKTLA+LLPL A +DPSR+AVQ L+ VP+RELGLQVA V K+L   T   + +KI VMS LEGS  +RQRAWAWA+PPH+VI  P  L  L+ +GA++ + V+YVVVDE D C+L E   + LHELL+RSL+P H            ED  E E+    L  +G     GA +   K  K RQTVF SAT+PQ  HF+    Q++W             P +V++  +  +P  LSH + V P E+K   LRAL++RE       A    A      PA +                     +A+     F  P   L  + +A L K+    G G+G+ E     GA    + + +R++  +  RA  +  +R GE ++L+S  +  RGLDVP+ TH+FN+ LP D   Y HR G          I +I+T ++ F + RL N +GV  ++I  G  K++K
Sbjct:   48 AQDSGLCDESFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE--DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGL-EDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEAGLVFAADWSPKPAEE--------------------VEAEKLLNPFLDPLGDLAKLLSADLAKSASQEGDGDGKCE-----GAAPRDLVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIFNMQLPRDTAAYAHRAGXXXXXXXXXNIFTIITEEERFALERLANALGVSFEEIK-GKGKKKK 540          
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S1FWL9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWL9_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.420e-97
Identity = 209/554 (37.73%), Postives = 293/554 (52.89%), Query Frame = 3
Query:  630 SAISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDE---------------------KYDA-VLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAG--------TGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLS--------ESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQ-KLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGET---------RLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
            S+       +TFRE +   LP+W++ RLE L    PT VQR  L  ++ ++                     K D  +L +QTGSGKTLA+LLP+ A +D SRSAVQ ++VVPTRELGLQV  VA+R+AAG               K+ VM+VL+GS N+RQRAWAWA+ P +V+G P  L+ ++  GA+R N++  VVVDE DACLL+         ST   LHELL+R LSPT+   D E+ ++  A  + V     +G A       ++RQT+F SAT+P H HF R CVQ +WT   P+H+ V     MPP L H   VC  +  +L  LR LV+R+        H                                   +  TR L+F  P +P+E +AA+L K L          + G+     A      LR +  L+ RA+TM+ F   E          R+L+S+D+ ARGLDVP+++H++N DLP   + YVHRGGRAGR G+PG + +IV   +EFV+ RL N  G++I+ +    + R+ K
Sbjct:   73 SSFHQTSEYDTFREKYSSLLPEWIIDRLEDLEMPIPTAVQRAYLDALMMEDGGEKGIIDAGGSNEADEISTTKSDGYILQSQTGSGKTLAYLLPILASIDASRSAVQAVIVVPTRELGLQVGRVARRIAAGFLPPLEDTARKTHREKLYVMTVLQGSENRRQRAWAWAESPQLVVGTPAELNGMIAKGAIRRNSIRAVVVDEADACLLTGGPGGSYDASTSRALHELLSRHLSPTYGEADVEDLKEVEAWGITVEEDGTSGRAP------QERQTIFVSATIPSHRHFTRMCVQNRWTKHLPMHIHVTPDMLMPPQLDHGKFVCRSQSDRLKALRTLVKRD--------H----------------------------------KEGMTRALIFVDPRRPMERMAAALAKDLSDE---NLSMKAGKTKMVGAKVFVGVLRYDASLSDRAETMASFIGEENDDMLHPSVLRILLSSDLVARGLDVPDVSHIYNFDLPGSSDTYVHRGGRAGRCGKPGTVTTIVCQDEEFVLDRLANAAGIEIRCVGRQKNGRKAK 575          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF38_9PHAE5.830e-25664.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSP0_ECTSI8.620e-24774.03DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z5K4_9STRA7.130e-16254.77DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4MVY5_9STRA1.400e-11341.01Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1Z5KA53_FISSO6.860e-10642.44Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3VGM2_9STRA1.070e-10542.24Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
W7TME3_9STRA1.830e-10339.93RNA helicase, DEAD-box type n=2 Tax=Monodopsidacea... [more]
B7FRY7_PHATC2.470e-10240.73Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1TTQ5_9STRA5.430e-9840.08Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1FWL9_9STRA1.420e-9737.73Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:41357..48321 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSP0
PFAMsDEAD,Helicase_C
Model size3037
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
Exons6
Evalue1.07e-251
EggNOG OGsCOG0513@1|root,KOG0327@2759|Eukaryota
Descriptionhelicase activity
Cds size2076
COG categoryJKL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.3.1prot_P-littoralis_Contig177.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig177 41458..47461 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789849.0580032-UTR-P-littoralis_Contig177:41356..414571680789849.0580032-UTR-P-littoralis_Contig177:41356..41457Pylaiella littoralis U1_48UTRP-littoralis_Contig177 41357..41457 +
1680789849.134173-UTR-P-littoralis_Contig177:47461..483211680789849.134173-UTR-P-littoralis_Contig177:47461..48321Pylaiella littoralis U1_48UTRP-littoralis_Contig177 47462..48321 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789849.0727324-CDS-P-littoralis_Contig177:41457..423421680789849.0727324-CDS-P-littoralis_Contig177:41457..42342Pylaiella littoralis U1_48CDSP-littoralis_Contig177 41458..42342 +
1680789849.083332-CDS-P-littoralis_Contig177:44394..446521680789849.083332-CDS-P-littoralis_Contig177:44394..44652Pylaiella littoralis U1_48CDSP-littoralis_Contig177 44395..44652 +
1680789849.0922995-CDS-P-littoralis_Contig177:45132..452851680789849.0922995-CDS-P-littoralis_Contig177:45132..45285Pylaiella littoralis U1_48CDSP-littoralis_Contig177 45133..45285 +
1680789849.1012914-CDS-P-littoralis_Contig177:45872..463311680789849.1012914-CDS-P-littoralis_Contig177:45872..46331Pylaiella littoralis U1_48CDSP-littoralis_Contig177 45873..46331 +
1680789849.1132545-CDS-P-littoralis_Contig177:46864..469511680789849.1132545-CDS-P-littoralis_Contig177:46864..46951Pylaiella littoralis U1_48CDSP-littoralis_Contig177 46865..46951 +
1680789849.1258433-CDS-P-littoralis_Contig177:47227..474611680789849.1258433-CDS-P-littoralis_Contig177:47227..47461Pylaiella littoralis U1_48CDSP-littoralis_Contig177 47228..47461 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig177.3.1

>prot_P-littoralis_Contig177.3.1 ID=prot_P-littoralis_Contig177.3.1|Name=mRNA_P-littoralis_Contig177.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=692bp
MGSPCPTLLSILAIALSLSRVCPLSIPSLTTGTFRGDSRGSSCSSSSTAS
HAASSSIGTRRRQQPHQHVVAMAATAMMSRVREGSPLLVADERAVTLSCS
RSRSSRGSRKPHRQLGHARRCLATLAAAADGSGSNRGSSSSTASIAAAAI
TTTSATTPQAASSSSSSAAEGADIVPSAISSGGSTETFRELFEGRLPDWL
LTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLF
ALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVL
EGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVD
ACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGA
AAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEA
MPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAG
KGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALG
GSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLL
VSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIV
TPKQEFVIRRLGNGIGVDIKKISLGSSKRRKKPEPSPEEAS*
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mRNA from alignment at P-littoralis_Contig177:41357..48321+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig177.3.1 ID=mRNA_P-littoralis_Contig177.3.1|Name=mRNA_P-littoralis_Contig177.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6965bp|location=Sequence derived from alignment at P-littoralis_Contig177:41357..48321+ (Pylaiella littoralis U1_48)
GCTTGGAACTCCTGTCGGCTGGTTTTGTGTCCCTGCTAATCCCTGTGTTG TCCTAGCCCCAGAGCACTACACCGGCTCTCTCTTCCCTGCCCCGTGCCGC CATGGGCTCGCCATGCCCGACTCTGTTGAGTATCTTGGCGATCGCGCTAT CTTTATCTCGCGTGTGTCCGTTGTCGATTCCATCTCTCACGACAGGAACG TTTCGAGGCGACAGCAGAGGCAGCAGCTGCAGCAGCAGCAGCACTGCATC ACACGCTGCGTCTTCGAGCATCGGTACCAGACGTCGACAGCAACCACACC AGCATGTGGTAGCGATGGCGGCAACGGCGATGATGTCGCGGGTGAGGGAA GGAAGTCCGCTGTTAGTGGCGGACGAGAGGGCTGTCACGCTAAGCTGCAG TCGCAGCAGGAGCAGCAGGGGCAGCAGGAAACCGCATCGTCAACTTGGAC ATGCACGGCGGTGTTTGGCAACCCTAGCCGCTGCTGCTGACGGTAGTGGA AGCAACCGCGGAAGCAGCAGCAGTACCGCATCAATAGCAGCGGCAGCAAT AACAACAACATCAGCAACAACACCGCAAGCTGCTTCTTCGTCGTCATCAT CAGCAGCTGAGGGAGCAGACATCGTACCCTCCGCTATAAGTAGCGGTGGC AGTACTGAGACGTTCCGCGAGTTGTTCGAGGGCCGCCTGCCGGACTGGTT GCTGACCCGCTTGGAGCAGCTGGGCTTCGCGGCTCCAACGCTGGTGCAGC GCCAGGCCCTCCAAGTCATCCTCGACGACGAGAAGTACGACGCGGTGCTG CACGCACAGACGGGCAGCGGCAAGACGCTCGCGTTTCTCCTCCCGCTTTT CGCCCTGGTCGACCCTTCCCGCTCGGCTGTCCAGGGTCTCGTCGTGGTCC CGACGCGGGAGCTCGGCCTACAGGTGGCCGGGGTGGCCAAGCGCCTTGCG GCGGGCACGGGCTCGGGCAGAAATAACAAGATTCAGGTGTGAACTCGTAC ATGATATCATATGATACGCACTTGTTGAAAAAATGGCGCTTTGTGATCCC TACTAACCTGTGCTGGGTGTATCATTTCGTATGAGATATATCGACAATAC CACCACGCTGTGTGCTGTACTCTTATACAGTACAGTAGAGGTCCCTGTTG AAGGCCGCATAGTGCCAAGGGCAAAAACCGGCCTTAAACAGGGCACCCGG CCTTACCTGAAACCGCCCCTGTTTAAGGCCGGTATCGGCCTTAAAAAGGA TTTTGGATTCCTCAGTAAGGCCGGTCTTACTGAGGAATTATGAGTTTTAG AGGGTGTAGCACGTAGACTCAAGCTATTATTTGACTACGGGGTACAGTAC ATGCACAATCACACAAATCACAGTTGCCAAGCCTCTCTGGGTGTGCACGA CATGGCTCTCATGTAAAGTCAAACGCAGCCCGCGGTGTCAAATGATGTTT GAAAGTTCCAATGTCGTTACCCGCAATCTGTAGCTGACATTTCCACAATA AAAAAAACATTTAACGTTCATCCAGAGCGTGACTCCCTTCTCCTTATTAA CCTAACTAGTCACAAGGCCAACCTAACCTTAACAACAGAATGAAACGCAA TCAAAGAAGATCCCGAGTTTCGGCGAAAGTAATGTATCAAGTGAATTGAA GACATACATGAAAGTTGGGGACCGCAACGAAACCACAGAAGGAATTCATA ATTATTCGCCGTGTCGACAAAACTATTTTACGTGCCGTGAGGGGCTACTG GTGTCTGCCCTGGTATAATGCACAGCTCACCAGCCGCACAAGGCATGGGT GCCCCTACTGGTTGCGTCGGTAGGGGTATGCTAGGAATTGCCGTGTTGCG TGTCTAGAGTGCTGTGTTGCGGCTGCAGTACAGTACATGCATGCGTGCGT CACCTCTCAAACCGGCCTTATTTAGGGCGGGCGGAGGTCCAAACAGGCCG TAAATAGGGATCATTCCTGTTTAAGGCCTGTGCGGCCTTAAAAAGGAAGA CTTTTGGGGAAGACGATTTCACCGGCCTTATACAGGGCAACCGGCCTTAA ATATGCGGCCTTAAACAGGGACCTCTACTGTATACCTGGTACAGCAGTAG GGTACACGTCTGCTGTATCACGTATACGCACTTCAACTTCAAAGCCCTCT TGTTTACTTGCACTTTCTGCCGTTGAGCCCTGGTCGACGATACTTGAACA TATTTGACAATCTGCGTAGCCCGGGGTAGCCCTGCCGCATCGACCGGCCA TCAAGAAACCAGAAAACAGGCTCAGCTTGACTTGAGTCTGCGTAAGACCA GAGCCGAGCTCGTACGAAGTATATTATATGAGAATAAATGTGGTGCTCGC TGTATCAGCCTCGCTCACCATGAGCCCCGCAACTTTCTGATTATTTCCAA GATATCAACCTCGTTTTCTTCAAGGCCAATTTCTCGAAAGCGGGCCGATA CTGTATCATCCCTCAGCGCGTCTGTCCGCCTGAAAATGGTGACACTTTTG GGTTGCTGTATATTGTGATAATAAAATGTTGGTGTGGTAGATCTCGAAAA TAAATCCCGGTCACATGGATCGTGGAATTGTCCATCGAAGGACCACTGCC AGCGGGCGTGGGTGTTTACGCATACGTGTGTGTATTTTGCTGCACATACC GCATCTTGTGAAGTCAACAAACCCACTGGACCGAGCTACCGTTCTCGATG TCTCAACGGCATAAAAGAGCGTTCCCGTACCGCACAGTGTGGCGCCGGAC CAAGAGCTATTCAAAACATGTGTCATTCCGGTGTGGACGCACTCTTCATG TGAGGAGCAATCGGGCTTCTAAATTCGGTCCTGGGGTACTTGCTGTACGG CATGCTATAATATGCTCCGGGGCATAGTACGGTCGGGGATGCGGTACAAT CACGCGCACCAATAGTCTTCGTTTTTCCTGCAGCGGGCACGTAATGCCAA CAGTGCCAATCTGCTGCTGTAAAGTGTTGTTTCTTCGTACCTCGTTTCTT GTTGTCCTCGACTAATTGTATATACATCAACGCGAAAGGTCATGTCGGTC CTCGAAGGGTCCAGCAACAAGCGGCAGCGGGCTTGGGCCTGGGCCGACCC CCCGCACATCGTCATCGGCAACCCGGAGAGCCTGTCGCGGCTCGTCACCA CCGGAGCCGTCCGCGTGAACGCCGTGTCGTACGTCGTCGTCGACGAGGTG GACGCGTGCCTGCTGTCGGAGAGCACTCGGGCGTGGCTGCACGAGCTCCT GGCCCGCAGCCTGTCTCCGACTCACACGAACGAGGACGGCGAAGAGGTAA AATTGAGATGGCAATTTCATCTTGACGCACAAGCAATACACATTGGGCGG GCAGGCAGACAGACACACGCACGCAAACGCACACGTACACGCACACACGC ACGCACGCGCGCAAGCAAGCACACGAGCTTCAATAATGCAGCATTCGGGA AATATTGGGGAAATGTATGGTGCGTCTTGCGATTTTGAATACGGAAACCC TTAGCGGGAGACGGAGGATTCCGTGGCCTGCAGGCTTGATACATCGACAA CGAGATGAAACTAACAATGATTACCCGGGCTTGCTACCCCACCATTCAAA CCTGCTGGCAATACCAGTGCCGGCAACGGGCAACCGAAAAGCGGAATCTA ACATTTGCCATGATGAATGTTCAACTTTTGAAAGCATGCCTCCCAATGTT ACTGAGCCCCCTCCCCCTCCCGCTGTCTCTGCCCTCTAAAACGTGTTGTT ATTGAACATTGCATCGATGAAAGCAGGACGAGGATGAGGTGGCTAGACTG GTTGCAGTTGGGGCCGGGAGGGTGACCGGGGCGGCGGCGCCTATAAAGAA GAGAGTGAAAGATAGACAAACCGTGTTCGCGAGCGCGACCGTGCCACAGC ACAACCATTTCATCCGGCAATGTGTCCAGGTACAAATGATAATTGTGATT TATTCATTTTTCCCTAGCGGTGATGTATGGCTGTGTGTGGAAATTTGACT TTCTATTTGTGTGCTGTGCATCTGGTACGTTCGTTTTTAAACGTTTCGTC TATTTTGGAAGACAAATATGATGCAGTACCTGGAGAGAGGTAGAAAAGAG GGAAGTGGGGTTGTGTCGTGTTTTGTTTTTTTCAAAACACAAGGTTTGGT GATCGGTTGGTCGACATCGGCAAATCCAACTTGTTTTCATGGGTAATCTG CTGACCGCACACCTTTGTGCGCAACTCACGGCAGCAAAGTTGGCGCGCGT GGTTGAGAAAGCTTTCCCTGGGCAAGCTCCTTGGAGTTGCGTGTGGAGGC GCTTCTAGCAGCTGAAGATCCCATGTCTAATGCCTTGTAACGTACGGTAC ACGAGCGAACAAGGCGGTCGTTTTTTCTTTTTTTCACGCCGCGCTACTGT GGAGATATGTCACTCGCAATCGCAATTCCACCGCGCACAGCTCCCACAAG CAATGATCTCTATGTGCCTGCTATGTACGCTCGTGCGCTTGATTGCCTCA ATGCGAAACATAACAGAAACAGTGGACGCTAACGGAGCCGGTCCACGTGC AAGTACACGCGAAGGAGGCCATGCCCCCGTCCCTGTCCCACTTTTACGTA GTTTGCCCGCCAGAGCAAAAACTGGCTGTCCTGCGGGCGCTGGTCAGGCG CGAGCTAGGCGTACCAGCAGTAACAGCACATGGCGCGGACGCCGTAGCGG GAGAGTTGGGACCAGCAGGGAAGGGGATAGCAGACCGACCAACAGGGGAC GGCGGTGCCGGTGGTGATGTCGCCGGTAACGGCGCCAAAGCCGACACGAG GGGGCTCGTGTTCGCGTTGCCTACCAAGCCCCTGGAAAGCATCGCGGCGT CGCTAGACAAGGCGCTAGGCGGGAGCGGGGGGGGGGAGGGGCAGCAAGAG AAGGGGAGGGGTGGGGGGGCGGTCGCGCCACCTATGGCGGAGTTCCTCCG CGAGGAGCTGGGTCTGAACGCCAGGGTAAGGAGTGCGTAGGGCGGACAGA CTCGACAACAACTTGTAACCGACTCGTTGTTTTTCGCGCAACACTGCTGT GAGGGTCAAGCTTTTTCCGCAGGAAACCGCGAATCGGTGGGATTATTCTC CTCGCCTGTTGACGGGCTTGCAGGGAAAAGGCAACGCGGTGTTGCTAGTA TTGTGCTGCCGGCCTCGAGGACAGGCTTGAGCGGCACTCTTTTGTCAGAC AGTACACCGGCATTTCTGTTAAGAGGGAGTTTTGATTTTTTTTTGTGTTT GCGACAGCACTTTGATATTGCTGAATCCGAGCGATGTACCGTTTCCCGCT GCAGTGTGAGTGAGCCTCTCGTCACGGTGTTTTTCGCCCGGCATGCGCCC CGGAAAGTTGGTTTCGTCGCCGGCGAAAAAATTATCCTGCGTGCACGAAT GTACAAAGCAAGCCAACGTAGCGCTCACGTTATTCTCGGGCTTGAGCATC TATTGTCGTCGTTGTCACACGAAACGCATTGTTCGAACCGGCCGGTTGCC TCTCGCAGGCAGACACGATGTCGCTTTTTCGGGAAGGGGAGACCCGTTTG CTCGTGTCGACGGACATGGCGGCGAGGGGCTTGGACGTGCCGGAGGTGAG GAAAGTATTTCCTGCAAAAACCACTCCTTTCCGGTTTGTTTTATTCAATT GATTTCATTGCCATAGCCGCGCCTGTGATGTATCTCACTCACTCAAGCGC CGTGTTTCATACAAACGTTTCCATTCATCTGCTCCGGTTTGTTTAGTTCG TAGTCCTCTTGTGTGCAGCTCATATCGCTCTGTGTAAACGTGCGCTTCTC GCAGACATGTATGTGCAGAGTTTCCAGGCATCATGTCGTCCTTCGATTCT TGTGTAACACGACCGATCCAGATTACGCACGTTTTCAACCTGGATCTACC TGTGGATGGGGAGGGCTACGTGCATCGAGGGGGCCGCGCCGGGAGACTGG GCAGACCGGGCAAGATCATCTCCATCGTCACCCCGAAGCAGGAGTTCGTC ATACGGCGGTTAGGCAACGGGATCGGGGTAGACATCAAGAAGATTAGCTT GGGTTCGTCCAAGAGACGGAAGAAGCCGGAGCCATCCCCCGAAGAGGCTT CGTAAAGTATGATATGATCGGCGGCGTTCTTTCATTCGCGCCACACGGCA TCTACGGGCGCTTTGGCCACGGTACTCCGGACAGACGCGGCGAACCCCGC CCCCACCTCCCCGAGTGGGTTTGGGCGTATGAATTTGTCGGCAACGGAAG CGGGGGGTGGAAATCGAGTGCGAAGTTGTTTGAAAGAACCTGTGGAGTTC TCGCCCAGTAGCCTACGGTTTTTTCTTTGTCGTTCGTGTTGCGGTCTCCG CATCCTTCCTTGCTGTTGCAGGGAAAGGAATCCCCAAAAATCAGCCAAGG GGTGAGTGATCGCCATGTTTGGTACGAGCGCTCTGTTGTTGGCCGAGATC TTACATATCAACACGCGTTGATCATCCCCGTTCGACAAGACAGGCATTCA GAAGCAGGGGGCGCCTCAAAACCACTGTGTGAGTGATCACAACAAGATAT TGCATCAGCTCCGCGAAGAGGCGGGCAAGCTCAACTGTCAGAAGCCTTCT CCGTGTGCGTCCGATGATGACTAGTTGTTCGGATGCAGCGGTGTTCGAGG ATGCATTCTTTAGAAAGCTGCGGTCGGCGCCCTGTAGACGAGAGCGCTCG TTCTTGGAGTTTGTACGGAAGTCAATACGGGATCGTGGGTATCGCAAGCC AGATCATTACTTTAATATTTTGGTATTGTGAGGCTAAAGATACCCCGTGT TTCTCGCGACCAGGCTGGGGTATCATATAATCGTCGGGGGGGGTTTCCTC TTTCCAACATTCCTGCGCCGTAGCACCTATCGAGGTGCTAAGGCACTGGC TGCCGCACTGGGCCAAGACTAATCGGGTCGATTCACCCGCTCAACTCCCC CGTGTTCGTCACGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig177:41357..48321+

>mRNA_P-littoralis_Contig177.3.1 ID=mRNA_P-littoralis_Contig177.3.1|Name=mRNA_P-littoralis_Contig177.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2076bp|location=Sequence derived from alignment at P-littoralis_Contig177:41357..48321+ (Pylaiella littoralis U1_48)
ATGGGCTCGCCATGCCCGACTCTGTTGAGTATCTTGGCGATCGCGCTATC
TTTATCTCGCGTGTGTCCGTTGTCGATTCCATCTCTCACGACAGGAACGT
TTCGAGGCGACAGCAGAGGCAGCAGCTGCAGCAGCAGCAGCACTGCATCA
CACGCTGCGTCTTCGAGCATCGGTACCAGACGTCGACAGCAACCACACCA
GCATGTGGTAGCGATGGCGGCAACGGCGATGATGTCGCGGGTGAGGGAAG
GAAGTCCGCTGTTAGTGGCGGACGAGAGGGCTGTCACGCTAAGCTGCAGT
CGCAGCAGGAGCAGCAGGGGCAGCAGGAAACCGCATCGTCAACTTGGACA
TGCACGGCGGTGTTTGGCAACCCTAGCCGCTGCTGCTGACGGTAGTGGAA
GCAACCGCGGAAGCAGCAGCAGTACCGCATCAATAGCAGCGGCAGCAATA
ACAACAACATCAGCAACAACACCGCAAGCTGCTTCTTCGTCGTCATCATC
AGCAGCTGAGGGAGCAGACATCGTACCCTCCGCTATAAGTAGCGGTGGCA
GTACTGAGACGTTCCGCGAGTTGTTCGAGGGCCGCCTGCCGGACTGGTTG
CTGACCCGCTTGGAGCAGCTGGGCTTCGCGGCTCCAACGCTGGTGCAGCG
CCAGGCCCTCCAAGTCATCCTCGACGACGAGAAGTACGACGCGGTGCTGC
ACGCACAGACGGGCAGCGGCAAGACGCTCGCGTTTCTCCTCCCGCTTTTC
GCCCTGGTCGACCCTTCCCGCTCGGCTGTCCAGGGTCTCGTCGTGGTCCC
GACGCGGGAGCTCGGCCTACAGGTGGCCGGGGTGGCCAAGCGCCTTGCGG
CGGGCACGGGCTCGGGCAGAAATAACAAGATTCAGGTCATGTCGGTCCTC
GAAGGGTCCAGCAACAAGCGGCAGCGGGCTTGGGCCTGGGCCGACCCCCC
GCACATCGTCATCGGCAACCCGGAGAGCCTGTCGCGGCTCGTCACCACCG
GAGCCGTCCGCGTGAACGCCGTGTCGTACGTCGTCGTCGACGAGGTGGAC
GCGTGCCTGCTGTCGGAGAGCACTCGGGCGTGGCTGCACGAGCTCCTGGC
CCGCAGCCTGTCTCCGACTCACACGAACGAGGACGGCGAAGAGGACGAGG
ATGAGGTGGCTAGACTGGTTGCAGTTGGGGCCGGGAGGGTGACCGGGGCG
GCGGCGCCTATAAAGAAGAGAGTGAAAGATAGACAAACCGTGTTCGCGAG
CGCGACCGTGCCACAGCACAACCATTTCATCCGGCAATGTGTCCAGAAAC
AGTGGACGCTAACGGAGCCGGTCCACGTGCAAGTACACGCGAAGGAGGCC
ATGCCCCCGTCCCTGTCCCACTTTTACGTAGTTTGCCCGCCAGAGCAAAA
ACTGGCTGTCCTGCGGGCGCTGGTCAGGCGCGAGCTAGGCGTACCAGCAG
TAACAGCACATGGCGCGGACGCCGTAGCGGGAGAGTTGGGACCAGCAGGG
AAGGGGATAGCAGACCGACCAACAGGGGACGGCGGTGCCGGTGGTGATGT
CGCCGGTAACGGCGCCAAAGCCGACACGAGGGGGCTCGTGTTCGCGTTGC
CTACCAAGCCCCTGGAAAGCATCGCGGCGTCGCTAGACAAGGCGCTAGGC
GGGAGCGGGGGGGGGGAGGGGCAGCAAGAGAAGGGGAGGGGTGGGGGGGC
GGTCGCGCCACCTATGGCGGAGTTCCTCCGCGAGGAGCTGGGTCTGAACG
CCAGGGCAGACACGATGTCGCTTTTTCGGGAAGGGGAGACCCGTTTGCTC
GTGTCGACGGACATGGCGGCGAGGGGCTTGGACGTGCCGGAGATTACGCA
CGTTTTCAACCTGGATCTACCTGTGGATGGGGAGGGCTACGTGCATCGAG
GGGGCCGCGCCGGGAGACTGGGCAGACCGGGCAAGATCATCTCCATCGTC
ACCCCGAAGCAGGAGTTCGTCATACGGCGGTTAGGCAACGGGATCGGGGT
AGACATCAAGAAGATTAGCTTGGGTTCGTCCAAGAGACGGAAGAAGCCGG
AGCCATCCCCCGAAGAGGCTTCGTAA
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