mRNA_P-littoralis_Contig177.3.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 744 bits (1920), Expect = 5.830e-256 Identity = 466/717 (64.99%), Postives = 503/717 (70.15%), Query Frame = 3
Query: 102 MGSPCPTLLSILAIALSLSRVCPLSIP--SLTTGTFRGDSRGSSCSXXXXXXXXXXSSIGTRRRQQPHQHVVAMAATAMMSRVREGSPL-LVADERAVTLSCSRSRSSRGSRKPHRQLGHARRCLATLAAAADGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGADIVPSAISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTA-----HGADAVAGELGP------AGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGR---------------------GGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
M P LLS+LAI LS V PLS P S TTG RG + S+ S SS R R +P Q+ V A + G L +V ER L RS S R+ ++ H XXXXXXXXXXXX A AD P ++ G TFRELF GRLPDWLLTRLEQLGFA PTLVQRQAL+VIL + K+DAVLHAQTGSGKTLAFLLPL A VDPSR+AVQGLVVVPTRELGLQVAGVAKRLAAGT SGR +KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESL+RLVTTGAVRVNAVSYVVVDEVDACLLSE TRA LHELLARSLSPTH +ED EDE+E RL VGAGRVTGAAAP+ ++++DRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPP LSH YVVCPPEQKLAVLRALV+RELGV A A GA LG AG+G D P+ GG VA +ADTRGLVFAL TKPLE IAASLDKALGG G G PP+AEFLREELGLNARAD MSLFREG+TRLLVSTDMAARGLDVPEITHVFNLDLP+DGEGYVHRGGRAGRLGRPGK+IS+VTP+QEFVIRRLGNGIGVDIKKI+LGSS+RR K
Sbjct: 1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTG-----SSRVVRCRHRPRQYTVVEEGGAEAA----GDSLSMVVGERRAAL--GRSSISSRQRRRSARVCHDATXXXXXXXXXXXXXXXXXXXXXXXXXXASQDSPAPLLDGGNVFSSTPNGAAAAD--PGPVNGG----TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEG--DSPSEGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 698
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 711 bits (1835), Expect = 8.620e-247 Identity = 382/516 (74.03%), Postives = 409/516 (79.26%), Query Frame = 3
Query: 660 TFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGG--------------------EGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
TFRELF GRLPDWLL RLEQLGFA PTLVQRQAL+VIL +EK+DAVLHAQTGSGKTLAFLLPL VDPSR+AVQGLVVVPTRELGLQVAGVAKRLAAGT SGR++KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESL+RLVTTGAVRVNAVSYVVVDEVDACLLSE TRA LHELLARSLSPTH +ED EDE+ ARL VGAGRVTGAAAP+ ++++DRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPP LSH+YVVCPPE+KLAVLR DTRGLVFAL TKPLE IAASLDKALGG G G +G E+ PP+AEFLR+ELGLNARAD MSLFREG+TRLLVSTDMAARGLDVPEITHVFNLDLP+DGEGYVHRGGRAGRLGRPGK+IS+VTP+QEFVIRRLGNGIGVDIKKI+LGSS+RR K
Sbjct: 5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT---------------------------------------------------DTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXAKGWDEQ-----PPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 464
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 496 bits (1277), Expect = 7.130e-162 Identity = 287/524 (54.77%), Postives = 343/524 (65.46%), Query Frame = 3
Query: 639 SSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPI---KKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGG----------------------------AVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKI 2117
SSG +T+REL+ RLP WL+ RLE+LGFA PTLVQ++AL IL +DAVLHAQTGSGKTLAFL+PLFA +DPSR++VQGLVVVPTRELGLQVA VAKRLAA TG+ ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+LS LV GAVR N V YVVVDEVDACL S RA L LLAR LSPT +E+E EV +L G VTGAAA ++RV+ RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H YV C P +KLA LRALVRRELG GDG A R LVFA +PL+ +AA+LD L K RGGG P+A+ LRE+LGL RAD ++ +R G R+L++TD+AARGLDVPE THVF+ DLP D EGY+HRGGRA ++SIVTP+QEFV++RL N +GV++ ++
Sbjct: 50 SSGLDGDTYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFA----QEEEAEVPQLP--GGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG----------------------------GDGXXXXXXA-------PRALVFAQANRPLDQMAAALDADL----------RKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVLQRLANAVGVEVAQL 520
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 372 bits (955), Expect = 1.400e-113 Identity = 235/573 (41.01%), Postives = 325/573 (56.72%), Query Frame = 3
Query: 606 AEGADIVPSAISSGG----STETFRELFEG-----RLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTG--SGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSE---------STRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPP-EQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFR--------------------------------------EGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
A GA V S+ + G S E+F EL+ LP WL R + G+ PTLVQR++L IL D V+ AQTGSGKTL+FLLPL + +D SRSA+Q ++VVPTRELGLQ++ VA+RLAA +G + KI VM +L+GS NKRQRAWAWA+PPH+V+G P+ L+++V+ G +R NAV +VVVDEVDACLL+ ++ LHELL+R LSPT+ D + + A LV+ A + G++ + DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV E +PP+LSH YVVC E K LR +++RE+ G L + LVF P +PLE++AA++ L G+ E + + G + LR E L+AR+ M+ FR G R+++STD+AARGLDV +++HV N DLP DG+ YVHRGGRAGRLGR G ++S++T +QEFV++RL N +G+ ++ ++ + RK+
Sbjct: 68 AVGARRVESSYETFGDAALSEESFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAILTG--MDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGDS--ASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREVR------------RGRL-----------------------------RKALVFCEPQRPLENMAAAIAADLNGTVWTESRNDDIEYAGVIV----SVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSKQGQDSGFIEDIDALNQEGVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVLQRLANKLGLAVQCVARQEKEGRKR 590
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO) HSP 1 Score: 349 bits (895), Expect = 6.860e-106 Identity = 219/516 (42.44%), Postives = 297/516 (57.56%), Query Frame = 3
Query: 624 VPSAISSGGS---TETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVIL-DDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAV-RVNAVSYVVVDEVDACLLSES-----TRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLD-KALGGSGGGEGQQEKGRGGGAVAPPMA--EFLREELGLNARADTMSLFREGE---TRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKIS 2120
+ S S G+ T+T + ++ +LP WLL R + LG+ PT +Q AL V+L D+ K D V+ A+TGSGKTL +LLP A +DP+RS VQ ++VVPTRELGLQVA VAKRL A + +KI +MSVL+GS N+RQRAWAWA+PP +VIG PE LS++V G + R N++ VVVDEVDACLL+ + + LHELL++ LS T ++D ED + A+ + R K+R+ RQT+ SAT+PQH HFI+QCVQ +WT TEPV V + E + PP+L H Y+VC PE KLA L+ R+ L P + LVFA +PLE +A +L +A G E + + P A LR + L RA M F + R+L STD+AARGLDV +THV + DLP D + YVHR GR GRLGR G+++S V P+QEFV+ RL N + +D++ ++
Sbjct: 44 IASIYQSDGALDQTDTLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVED-----TMGALSSTRP-------KRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLLSSPV-----------------------------------------PFKVLVFAEEQRPLEEMALALAWEAEHGVYWQESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANVTHVIHFDLPPDADTYVHRAGRTGRLGRSGQVLSFVAPEQEFVLNRLANKLSLDLRCVA 502
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 349 bits (896), Expect = 1.070e-105 Identity = 226/535 (42.24%), Postives = 304/535 (56.82%), Query Frame = 3
Query: 651 STETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGT-GSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLL--------SESTRAW-------LHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPP-EQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADT--RGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFR--------------------------EGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKIS 2120
S ETF E F +P WL +R ++ G+ PTL+Q +A+ IL+D D ++ AQTGSGKTL +LLPL + +DP+RS++QG++VVPTRELG+QVA VA+RLAAG+ S KI VMSVL+GS NKRQRAWA +DPPH+VIG P L +V ++ +AV +VVVDEVDACLL S+S+++ LHELL+R LSPT + EDE+ + +L V G + I DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V E +PP+L H YVVC EQK+ L ++ +++ + +K DT R LVF P + LE +A L + L S +V A LR E + R M FR +G+ R+L+STD+AARGLD+ +ITHV N DLP +G+ YVHRGGRAGRLGR G ++S++T +QEFV+ RL N +G+DIK I+
Sbjct: 55 SNETFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDGN-DVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQL-----SLVEGGGSRIVSHGTDRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQI-------------------------------------MKRKKSKLDTTCRVLVFCEPKRHLEEMAEILKRDLSKSLD------------SVYDVSASVLRYEDPTSVRMAAMEEFRGADTYLGGRIMDEVSEGDEKDTSQGVKGDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVLERLANKLGLDIKCIA 530
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA) HSP 1 Score: 346 bits (887), Expect = 1.830e-103 Identity = 226/566 (39.93%), Postives = 311/566 (54.95%), Query Frame = 3
Query: 612 GADIVPSAISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAG---------------------------TGS-----GRNN-----KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTHTNEDGEED--------EDEVARLVAVGA---------GRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPE-QKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRK 2144
G +++ A + G + ETF +L+ RLP WLL R+E LG+ PT VQ++AL IL+ E D V+H+QTG+GKTLAF+LPL A +D +++AVQ LVVVP+RELGLQVA VAK+LA+G GS G +N KI +MS+LEGS N+RQ+AW A+PPH+VIGNP SL++LV G +R + V VVVDEVDACL S T L LL + LSP+ + EE+ +DE L+ GA GRV AP K + RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V E MPP L H Y+V P + K A L A +RRE + A ++F + E +AA L ++ G + G GQ+ +G A E + RA M FR GE+ LV+TD AARGLDVP ++HV LD+ + + Y+HRGGRAGR+GRPG ++S+V+ + F + RL N + ++++++ + R +
Sbjct: 101 GKEMMHVAENDGTTAETFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAILEGE--DVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPWK--LVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQAC-----------------------------------------VIFTADDREAEKMAAILARSGGLAAG--GQEPRGESSVVQALVGGEHIAR------RAKVMDAFRAGESWGLVTTDFAARGLDVPRVSHVIMLDVAGEADTYLHRGGRAGRMGRPGWVVSLVSETEAFALVRLANSLKIEVRRMGVMKRPRSR 613
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 343 bits (880), Expect = 2.470e-102 Identity = 224/550 (40.73%), Postives = 302/550 (54.91%), Query Frame = 3
Query: 624 VPSAISSGG-STETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRN-----NKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAV-RVNAVSYVVVDEVDACLLSES-------TRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPSLSHFYVVC-PPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGS-----GGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFR-EGET----------------------RLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRR 2141
V +S G S E+F + LP WL+ + + G+ P+ +Q +AL IL E+ DAV+ A+TGSGKTLA+LLP A +D SR+AVQ L+VVPTRELGLQVA VAKRLAA + N +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L +V G + R N+V ++VVDEVDACLL+ + + LHELL++ LSPT+ + E +D V R V T A + RQT+FASAT+PQH HF++QC Q QWTL EP HV + ++ +P +L H Y VC +QKLA LR LV + K + + P + LVF+ +PLE +A L + G G G+ Q+ R + LR E L+ RA + FR +G T R+L STD+AARGLD+ +I+HV + DLP D + YVHR GR GR GR G+++ I++P QEFV+ RL N + VD K I+ K+R
Sbjct: 120 VEEILSDGSLSAESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILF-ERRDAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTS----TKTATSTRPLSSQRQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYA--------------------KSVIEPPK------------------KVLVFSDARRPLEEMAQILANDIEGGMLWKDGYGKEQERDVR-------AVVAVLRYEDSLSQRAAAIDSFRGDGYTMASGASQTYTSRDNDSDTAPSLRVLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVLTRLTNKLNVDTKCIARQQKKKR 619
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA) HSP 1 Score: 329 bits (843), Expect = 5.430e-98 Identity = 210/524 (40.08%), Postives = 285/524 (54.39%), Query Frame = 3
Query: 633 AISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDEKYDAVLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAGTGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLSESTRAWLHELLARSLSPTH----------TNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPSLSHFYVVCPPEQKLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESI-AASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGETRLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRK 2144
A SG E+FR+L+ LPDWLL RLE+LGF PTL Q AL + E D VLHAQTGSGKTLA+LLPL A +DPSR+AVQ L+ VP+RELGLQVA V K+L T + +KI VMS LEGS +RQRAWAWA+PPH+VI P L L+ +GA++ + V+YVVVDE D C+L E + LHELL+RSL+P H ED E E+ L +G GA + K K RQTVF SAT+PQ HF+ Q++W P +V++ + +P LSH + V P E+K LRAL++RE A A PA + +A+ F P L + +A L K+ G G+G+ E GA + + +R++ + RA + +R GE ++L+S + RGLDVP+ TH+FN+ LP D Y HR G I +I+T ++ F + RL N +GV ++I G K++K
Sbjct: 48 AQDSGLCDESFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE--DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGL-EDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEAGLVFAADWSPKPAEE--------------------VEAEKLLNPFLDPLGDLAKLLSADLAKSASQEGDGDGKCE-----GAAPRDLVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIFNMQLPRDTAAYAHRAGXXXXXXXXXNIFTIITEEERFALERLANALGVSFEEIK-GKGKKKK 540
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Match: A0A7S1FWL9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWL9_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.420e-97 Identity = 209/554 (37.73%), Postives = 293/554 (52.89%), Query Frame = 3
Query: 630 SAISSGGSTETFRELFEGRLPDWLLTRLEQLGFAAPTLVQRQALQVILDDE---------------------KYDA-VLHAQTGSGKTLAFLLPLFALVDPSRSAVQGLVVVPTRELGLQVAGVAKRLAAG--------TGSGRNNKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLSRLVTTGAVRVNAVSYVVVDEVDACLLS--------ESTRAWLHELLARSLSPTHTNEDGEEDEDEVARLVAVGAGRVTGAAAPIKKRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPSLSHFYVVCPPEQ-KLAVLRALVRRELGVPAVTAHGADAVAGELGPAGKGIADRPTGDGGAGGDVAGNGAKADTRGLVFALPTKPLESIAASLDKALGGSGGGEGQQEKGRGGGAVAPPMAEFLREELGLNARADTMSLFREGET---------RLLVSTDMAARGLDVPEITHVFNLDLPVDGEGYVHRGGRAGRLGRPGKIISIVTPKQEFVIRRLGNGIGVDIKKISLGSSKRRKK 2147
S+ +TFRE + LP+W++ RLE L PT VQR L ++ ++ K D +L +QTGSGKTLA+LLP+ A +D SRSAVQ ++VVPTRELGLQV VA+R+AAG K+ VM+VL+GS N+RQRAWAWA+ P +V+G P L+ ++ GA+R N++ VVVDE DACLL+ ST LHELL+R LSPT+ D E+ ++ A + V +G A ++RQT+F SAT+P H HF R CVQ +WT P+H+ V MPP L H VC + +L LR LV+R+ H + TR L+F P +P+E +AA+L K L + G+ A LR + L+ RA+TM+ F E R+L+S+D+ ARGLDVP+++H++N DLP + YVHRGGRAGR G+PG + +IV +EFV+ RL N G++I+ + + R+ K
Sbjct: 73 SSFHQTSEYDTFREKYSSLLPEWIIDRLEDLEMPIPTAVQRAYLDALMMEDGGEKGIIDAGGSNEADEISTTKSDGYILQSQTGSGKTLAYLLPILASIDASRSAVQAVIVVPTRELGLQVGRVARRIAAGFLPPLEDTARKTHREKLYVMTVLQGSENRRQRAWAWAESPQLVVGTPAELNGMIAKGAIRRNSIRAVVVDEADACLLTGGPGGSYDASTSRALHELLSRHLSPTYGEADVEDLKEVEAWGITVEEDGTSGRAP------QERQTIFVSATIPSHRHFTRMCVQNRWTKHLPMHIHVTPDMLMPPQLDHGKFVCRSQSDRLKALRTLVKRD--------H----------------------------------KEGMTRALIFVDPRRPMERMAAALAKDLSDE---NLSMKAGKTKMVGAKVFVGVLRYDASLSDRAETMASFIGEENDDMLHPSVLRILLSSDLVARGLDVPDVSHIYNFDLPGSSDTYVHRGGRAGRCGKPGTVTTIVCQDEEFVLDRLANAAGIEIRCVGRQKNGRKAK 575 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig177.3.1 >prot_P-littoralis_Contig177.3.1 ID=prot_P-littoralis_Contig177.3.1|Name=mRNA_P-littoralis_Contig177.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=692bp MGSPCPTLLSILAIALSLSRVCPLSIPSLTTGTFRGDSRGSSCSSSSTASback to top mRNA from alignment at P-littoralis_Contig177:41357..48321+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig177.3.1 ID=mRNA_P-littoralis_Contig177.3.1|Name=mRNA_P-littoralis_Contig177.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6965bp|location=Sequence derived from alignment at P-littoralis_Contig177:41357..48321+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig177:41357..48321+ >mRNA_P-littoralis_Contig177.3.1 ID=mRNA_P-littoralis_Contig177.3.1|Name=mRNA_P-littoralis_Contig177.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2076bp|location=Sequence derived from alignment at P-littoralis_Contig177:41357..48321+ (Pylaiella littoralis U1_48)back to top |