mRNA_P-littoralis_Contig176.86.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.750e-60 Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 1
Query: 124 QDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 507
Q ILEHRF +RAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSG+DF SDYR++IMLAV++AE AENVRARSRNS AVLCPRYI+VEPL+A PVVEAPVPAA G +T+VNPYA SK
Sbjct: 237 QIILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAAPVVEAPVPAAQGSSTIVNPYASSK 364
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 192 bits (488), Expect = 1.200e-53 Identity = 101/120 (84.17%), Postives = 109/120 (90.83%), Query Frame = 1
Query: 148 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 507
AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYR +IMLAV++A AENVR+RSRNS AVLCPRYI+VEPL+A PVVE VPAA G +T+VNPYA SK
Sbjct: 917 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAATPVVETSVPAAQGSSTIVNPYASSK 1036
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.230e-39 Identity = 80/143 (55.94%), Postives = 97/143 (67.83%), Query Frame = 1
Query: 1 LRLTILGFVGTCRYFFEHPDCFGVDDLSSNADRFINPRTFSQDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRN--ARSGDDFNVSDYRAK--IMLAVSEAETAENVRARSRNSSVAVLCPRYITV 417
LRL+ILGFV CRY FE P+ F +D LS N RF++PR SQDI EHRF+HIRA LGT RNPTA +AK+RS GDL R +G R N +RN ARSG DF K I+LAV++ ET + VRA RN+ VLCPRY+ +
Sbjct: 138 LRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPRYMDI 280
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 146 bits (369), Expect = 1.160e-37 Identity = 80/149 (53.69%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 1 LRLTILGFVGTCRYFFEHPDCFGVDDLSSNADRFINPRTFSQDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVE 447
+R+ ILGFV CRY FE F V FIN R QD++EH F H+R GLG+ RNPTAAQAKER RGD+ RGLHG RAN+NRNAR G DF S YRA++ML V E E + +RAR+++S AVL P YI+V A PV +
Sbjct: 619 IRVCILGFVSMCRYLFEEDSRFKVSPRRP-WPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVAD 766
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.820e-28 Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 124 QDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITV 417
+D +EHRF H R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G+DF S R +I+L V++ E + +RA SRN + AV+ PRY++V
Sbjct: 66 RDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSV 163
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 101 bits (251), Expect = 1.910e-24 Identity = 63/122 (51.64%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 154 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEA-----PVPAATGPATVV-NPYAP 501
+R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G DF S R +I+L V++ E + +RA SRN + AV+ RY++V A P VE PA+ G VV N YAP
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQESTPASAGQTPVVFNSYAP 122
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 107 bits (266), Expect = 8.830e-24 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 127 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVV 444
DI EHR+ H+ GLG+ NPT A+AKER+ RGDL R LHG SRA N+NAR G+DF S R +I+L V++AE + +RA S+N + AV+ PRYI+++ A PVV
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVV 635
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.330e-22 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 154 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVE 420
+R LG+ NP AAQAKER+ RGDL R LHG SRAN N+NAR G+DF S R +IML V++AE + +RA SRN AV+ PRYI+++
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISID 89
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 4.620e-21 Identity = 56/109 (51.38%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 1 LRLTILGFVGTCRYFFEHPDCFGVDDLSSNADRFINPRTFSQDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIML 327
+R+ ILG V CRY FE F + LS + FIN R QDI+EHR+ H+ LG+ NPTAAQAKER+ + DL R LHG SRAN AR G+DF S R +IML
Sbjct: 104 IRVCILGTVSMCRYLFEKDSRFKIYPLS-DVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIML 208
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.430e-19 Identity = 60/129 (46.51%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 1 LRLTILGFVGTCRYFFEHPDCFGVDDLSSNADRFINPRTFSQDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRA-KIMLAVSEAETAENVRARSRNSS 384
+R TILGFV CRY F+ +DL S RF+ PR FSQDILEHRFAHIR+G GT +NPTA QA E + GD R HG R N +R+A G F + D + + + +E A+ VRA +R+ +
Sbjct: 541 MRTTILGFVAMCRYVFKD------EDLVSGG-RFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA--GMAFQLEDSQGVRAAFPANASERAQVVRAETRDDA 660 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.86.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig176.86.1 >prot_P-littoralis_Contig176.86.1 ID=prot_P-littoralis_Contig176.86.1|Name=mRNA_P-littoralis_Contig176.86.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=170bp LRLTILGFVGTCRYFFEHPDCFGVDDLSSNADRFINPRTFSQDILEHRFAback to top mRNA from alignment at P-littoralis_Contig176:247762..248550- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig176.86.1 ID=mRNA_P-littoralis_Contig176.86.1|Name=mRNA_P-littoralis_Contig176.86.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=789bp|location=Sequence derived from alignment at P-littoralis_Contig176:247762..248550- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig176:247762..248550- >mRNA_P-littoralis_Contig176.86.1 ID=mRNA_P-littoralis_Contig176.86.1|Name=mRNA_P-littoralis_Contig176.86.1|organism=Pylaiella littoralis U1_48|type=CDS|length=510bp|location=Sequence derived from alignment at P-littoralis_Contig176:247762..248550- (Pylaiella littoralis U1_48)back to top |