prot_P-littoralis_Contig176.83.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig176.83.1
Unique Nameprot_P-littoralis_Contig176.83.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length56
Homology
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BLAST of mRNA_P-littoralis_Contig176.83.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 5.900e-10
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:    1 EGGRVDSGSGNGRVDVVGSGSIGEISNVRVSQDSSAGGESLEWTDALPLEDAEVSK 56
            EGG VD GSGNG V+V G G  G+ISNV V++ S+ GGE LEW DA+PLE+A +SK
Sbjct:  361 EGGLVDHGSGNGPVNVAGDGGDGKISNVWVNRVSATGGEGLEWIDAVPLEEAVMSK 416
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9K2_9PHAE5.900e-1062.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig176contigP-littoralis_Contig176:245717..245884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig176.83.1mRNA_P-littoralis_Contig176.83.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig176 245717..245885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig176.83.1 ID=prot_P-littoralis_Contig176.83.1|Name=mRNA_P-littoralis_Contig176.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=56bp
EGGRVDSGSGNGRVDVVGSGSIGEISNVRVSQDSSAGGESLEWTDALPLE
DAEVSK
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