prot_P-littoralis_Contig176.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig176.19.1
Unique Nameprot_P-littoralis_Contig176.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length359
Homology
BLAST of mRNA_P-littoralis_Contig176.19.1 vs. uniprot
Match: A0A6H5L7M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M4_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.390e-65
Identity = 156/415 (37.59%), Postives = 209/415 (50.36%), Query Frame = 0
Query:   15 LLVATVLLASADGQRGRDHDGHQ----GPNG---------------------------------GXXXXXXXXKAPSCTEDQSTAGIDASSTYAKCTGLEYADFMSLVHVDLEILQDASSCFQEKVDEI-EAGRTPGEQLSEEEAQELQ----DKMDAAFDACVQAAKDADETNAATATTDFLDKILSPDSKICSCFPAFEDKLPECESWSRFRHFGTHLEELCDHVENGDFTLPVAGGVA--GLTPASSSSAAGTGTPNDPVAPK---------------------GGSHDPHVPNTYGPCAPGQHGQDHGNGPKDCQ------EPSEEELGDANDGRGGGGPPSDREAGGGALGFGMSVLGVVVVGAFVGVGGVWAWGKFQGGTRQPGVRYMATGLEDNDIGTELGPFGREYA 358
            LL   VL+  A G RG +H+GH     GP G                                  X       +A  CT+ Q+ A + A++ Y KC  L+YADF +LVH D+ IL+DA++CF+ K DEI E    P + +SE+E + L+    +K+  AF  CV+ A+  DE  A+ AT  FL+K+L+ +S IC+C P F  K+P C  W R+   G  ++ +CD +++G+ T+     +A   +TP    S         P                              P +PNT+GPC PGQ  + H + PK CQ      E   EE GD  D          R  GGG +  G+SV+GVV VG    VGG+WAWGKFQ GTRQPGVRYMATGL DN+IGTELGPFGR+YA
Sbjct:   14 LLAVAVLVTIAGGDRGDEHEGHHDEHHGPVGLGDHEHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDHEIRAVECTQTQTQAALKATANYVKCAFLDYADFQALVHADVSILEDAAACFKTKADEIAEEIPPPDDNMSEDEVKALEKETAEKLATAFQECVKEAEAEDE-EASQATVQFLEKMLAEESTICACLPPFLIKMPSCGPWIRYHDVGEIVQNVCDFIDDGNNTVVADMDIAEVDVTPEERDSQDNATVAVLPAEDTKKLEXXXXXXXXXXXEAGIXXXXXRRPRLPNTFGPCPPGQ--EVHPSDPKACQPSLNSEEYQGEEFGDGRD---------SRREGGGMISLGLSVIGVVAVGGVXXVGGLWAWGKFQSGTRQPGVRYMATGL-DNNIGTELGPFGRQYA 415          
BLAST of mRNA_P-littoralis_Contig176.19.1 vs. uniprot
Match: D8LR88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR88_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 5.340e-58
Identity = 136/329 (41.34%), Postives = 177/329 (53.80%), Query Frame = 0
Query:   52 APSCTEDQSTAGIDASSTYAKCTGLEYADFMSLVHVDLEILQDASSCFQEKVDEI-EAGRTPGEQLSEEEA----QELQDKMDAAFDACVQAAKDADETNAATATTDFLDKILSPDSKICSCFPAFEDKLPECESWSRFRHFGTHLEELC-----------DHVENGDFTLPVAGGVAGLTPASSSSAAGTGTPNDPVAPKGGSHDPHVPNTYGPCAPGQHGQDHGNGPKDCQ------EPSEEELGDANDGRGGGGPPSDREAGGGALGFGMSVLGVVVVGAFVGVGGVWAWGKFQGGTRQPGVRYMATGLEDNDIGTELGPFGREYA 358
            A  CT+ Q+ A + A++ Y KC  L+YADF +LVH D+ IL+DA++CF+ K DEI E    P + +SEEE     QE  +K+  AF  CV+ A+  DE  A+ AT  FL+K+L+ +S IC+C   F  K+P C  W R+   G  ++ +            D  ++    +  A     L                        H  H+PN +GPC PGQ  + H + PK CQ      E   EE GD  DGR        RE GGG +  G+SV+GVV VG        WAWGKFQ GTRQPGVRYMATGL DN+IGTELGPFGR+YA
Sbjct:   88 AEECTQTQTQAALKATANYVKCAFLDYADFQALVHADVAILEDAAACFKTKADEIAEEIPPPDDNMSEEEVKALEQETAEKLATAFQECVKEAEAGDE-EASQATVQFLEKLLAEESTICACLSPFLIKMPTCGPWIRYHDVGKIVQNVLVAEVDLTPEEKDSQDDAIVAVLPAENTKKLXXXXXXXXXXXXXXXXXXXXXXXEHPAHLPNAFGPCPPGQ--EAHPSDPKACQPSMNSEEYQGEEFGDGRDGR--------RE-GGGMISLGLSVMGVVAVGXXXXXXXXWAWGKFQSGTRQPGVRYMATGL-DNNIGTELGPFGRQYA 403          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7M4_9PHAE1.390e-6537.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR88_ECTSI5.340e-5841.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig176contigP-littoralis_Contig176:88824..102821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig176.19.1mRNA_P-littoralis_Contig176.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig176 88582..106059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig176.19.1 ID=prot_P-littoralis_Contig176.19.1|Name=mRNA_P-littoralis_Contig176.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=359bp
MRAIGPRATRSWMWLLVATVLLASADGQRGRDHDGHQGPNGGPGNGEGPG
KAPSCTEDQSTAGIDASSTYAKCTGLEYADFMSLVHVDLEILQDASSCFQ
EKVDEIEAGRTPGEQLSEEEAQELQDKMDAAFDACVQAAKDADETNAATA
TTDFLDKILSPDSKICSCFPAFEDKLPECESWSRFRHFGTHLEELCDHVE
NGDFTLPVAGGVAGLTPASSSSAAGTGTPNDPVAPKGGSHDPHVPNTYGP
CAPGQHGQDHGNGPKDCQEPSEEELGDANDGRGGGGPPSDREAGGGALGF
GMSVLGVVVVGAFVGVGGVWAWGKFQGGTRQPGVRYMATGLEDNDIGTEL
GPFGREYA*
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