prot_P-littoralis_Contig176.114.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig176.114.1
Unique Nameprot_P-littoralis_Contig176.114.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length559
Homology
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BLAST of mRNA_P-littoralis_Contig176.114.1 vs. uniprot
Match: A0A6H5JAD4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD4_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.250e-9
Identity = 65/160 (40.62%), Postives = 84/160 (52.50%), Query Frame = 0 
Query:   92 LSAKIADLTLSADPAGLAGANPDGMMPPTPLPDTRG----AVGGLQLAAPGVLRQGPPLFGAAAEPRASTWGAGGGA-TTPSAG-VAAAVEGGRLGGSAVETVVGTYPQQRSGLNLTPPPWEGSEKRN----DFVPSVPS--LAIGASAPSKGVSPPSLA 239
            L+AKI DLTLSAD  GL G NPDGMMP TP+PD  G    A   LQ  A G   +     G      +   G+G      P+ G VAAA        + V   VG   Q+R GLNLTPPPWE +++R+      V S+P+  +A+ AS+   G +P + A
Sbjct:  490 LTAKIEDLTLSADAVGLEGPNPDGMMPRTPVPDVSGDGALAGAALQRGAAGFAEEVGGTSGGLRPAGSGDEGSGXXXXAAPAVGAVAAAGVAAHHPAAVVVGDVGELAQKRGGLNLTPPPWEANQRRDLPAAAAVSSLPTPPVAVAASSLPSGATPSAFA 649
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAD4_9PHAE2.250e-940.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig176contigP-littoralis_Contig176:432450..434126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig176.114.1mRNA_P-littoralis_Contig176.114.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig176 432394..435567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig176.114.1 ID=prot_P-littoralis_Contig176.114.1|Name=mRNA_P-littoralis_Contig176.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=559bp
MFGMQAAAVGTAEQARGGGEEEARHQHHRHQDDPRPAVPPCTRRASSQDP
AVMDDDTDEEETGEGGVADVQQQQQQRSEEQEQGDVSTAALLSAKIADLT
LSADPAGLAGANPDGMMPPTPLPDTRGAVGGLQLAAPGVLRQGPPLFGAA
AEPRASTWGAGGGATTPSAGVAAAVEGGRLGGSAVETVVGTYPQQRSGLN
LTPPPWEGSEKRNDFVPSVPSLAIGASAPSKGVSPPSLASPEESSAPAPP
PADAFDADAASRAPVETKSSELEPDRPPLSSGGGGSGSDERDGVSGGSLF
PEEIVPQEETSATMTQEGTASALSTDEVDLDLAGNDGRGKAEKEGVGAGE
SEDDVGGKSAPPPSPADLPGSVSAGCCEGGDGAGVARTYTAGEMEAPGVA
AGASPEQPVSSERATALGGEAAAAAAAAEPTVTVAEATATRGEADGSPSS
AAVAAWGGGGGGGEPAEDEGAVQAKGEAVVAAPGFSSSEDDGSLRCDPET
PTGSAPATGDAVAERKAEGFAAIHGRQDSGVIEHKSVEPGGGSKEDLGDD
AGRAWSKE*
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