mRNA_P-littoralis_Contig175.91.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig175.91.1
Unique NamemRNA_P-littoralis_Contig175.91.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.640e-50
Identity = 146/450 (32.44%), Postives = 225/450 (50.00%), Query Frame = 3
Query: 1440 GVFSHSPCNNDAFKKLQTELDELCTALEVLRRNDTRWGSVYAMFQREVRLYKPMQAFFTENLNKPKISARAPSPAQWQAAREVISVLQDASLVSTQVQGGRHGFVGMAINSMYVLLTSLSESTQD-------VVSLDPFDGDSEDIPVTDLLPEVQELLEILVDDMGSRGLARAEKPTEKICLMLDPRFKSCCLAVCSNGGTACSRLQPARCGRSWGILRHCICERGCRRNGECLGGSSEASPGAAPEAAAGVNPSGVNPSAGGGDPPQPAKMSRMERIRASLSTQVSGPTGDVDAAEDRAD------VAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDAS-GNVVAPARWPHLSLLARVYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTL 2747
            GVFSHS  NND  K+LQ   +      E+LR NDTRW S + M  R + L KP+  +F     K   + R  +P +W    EV S+L D S V+ ++QG     VG A+  ++ L+  L E T         V+ L P    ++D  V DL  E Q +LE+L + M  +G+  A+   E++  ++DPR +S       NG     +       ++   L+  I +           G + A+P  AP     +N   V P+      P+  K+SR+E  RA+     +    +  + ED++       + ERE   Y+ E    +   F++L YWN RG D V A+ G V +PA  P+L+ +AR+Y G++ TSCQAERNFSAL  ++  +R   LP K+E+M+ +RLNRHL+    +++  +   KA     A++ +A Q+ R   TV L
Sbjct:  229 GVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYF----KKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRK-------KAEDDLKAVIAKFDV--------GPATAAPAPAPV----MNLDRVEPA------PKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 649          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.670e-50
Identity = 148/450 (32.89%), Postives = 226/450 (50.22%), Query Frame = 3
Query: 1440 GVFSHSPCNNDAFKKLQTELDELCTALEVLRRNDTRWGSVYAMFQREVRLYKPMQAFFTENLNKPKISARAPSPAQWQAAREVISVLQDASLVSTQVQGGRHGFVGMAINSMYVLLTSLSESTQD-------VVSLDPFDGDSEDIPVTDLLPEVQELLEILVDDMGSRGLARAEKPTEKICLMLDPRFKSCCLAVCSNGGTACSRLQPARCGRSWGILRHCICERGCRRNGECLGGSSEASPGAAPEAAAGVNPSGVNPSAGGGDPPQPAKMSRMERIRASLSTQVSGPTGDVDAAEDRAD------VAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDAS-GNVVAPARWPHLSLLARVYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTL 2747
            GVFSHS  NND  K+LQ   +      E+LRRNDTRW S + M  R + L KP+  +F     K   + R  +P +W    EV S+L D S V+ ++QG     VG A+  ++ L+  L E T         V+ L P    ++D  V DL  E Q +LE+L + M  +G+  A+   E++  ++DPR KS       NG     +       ++   L+  I +           G + A+P  AP     +N   V P+      P+  K+SR+E  RA+     +    +  + ED++       + ERE   Y+ E    +   F++L YWN RG D V A+ G V +PA  P+L+ +AR+Y G++ TSCQAERNFSAL  ++  +R   LP K+E+M+ +RLNRHL+    +++  +   KA     A++ +A Q+ R   TV L
Sbjct:  424 GVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYF----KKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRK-------KAEDDLKAVIAKFDV--------GPATAAPAPAPV----MNLDPVEPA------PKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDL 844          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 4.820e-50
Identity = 94/231 (40.69%), Postives = 145/231 (62.77%), Query Frame = 1
Query:  670 GSSDQKDGKPAAGSRSIAQHFIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGS 1362
            GSS       A+ S S+  + +  +    +    +R+VI CC+++RP  M H  GF+ F+G LSP YV  T+   T    LD L + V+ +++  L+   + C  +G+ G F G Q DLT+  G E+ T TVS++ +G T++ R+ L  +AFPGTHTA D+ PWI E+T E+FA  +G+ + EP  +++A TVDQGGN+VNA +++GVPV+ C  HR+N+ + W +GIAG+
Sbjct:  174 GSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGE-DVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGN 403          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 2.490e-48
Identity = 96/234 (41.03%), Postives = 146/234 (62.39%), Query Frame = 1
Query:  730 FIQPMTPTEKRKH-QVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVM 1428
            F+ P    ++R+   +RYVI CC++ RP  M +  GF+ FVG LSP YV  T+  +T + +LD L   V   ++  L+   + C  +G+GG F G Q DLT+  G E+ T  VS++ +G T++ R++L T+AFPG+HTA D+ PWI  +T E+F  ++G  + E   +++A TVDQG N+VNA  ++GVPV+ C  HR+NS + W +GIAGS        TCKN  ++ L A++
Sbjct:    4 FVAPKMLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT------TCKNKPMKKLAALV 230          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.040e-47
Identity = 93/234 (39.74%), Postives = 147/234 (62.82%), Query Frame = 1
Query:  730 FIQPMTPTEKRKH-QVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVM 1428
            F+ P    ++R+   +RY+I CC+++RP  M +  GF+ FVG LSP YV  T+  +T + +LD L   ++  ++  L+   + C  +G+GG F G Q DLT+  G E+ T  VS++ +G T++ R++L T+AFPG+HTA D+ PWI  +T E+   ++G  + E   +++A TVDQG N+VNA  ++GVPV+ C  HR+NS + W +GIAGS        TCKN  ++ L A++
Sbjct:    4 FVAPKVLQKQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVT------TCKNKPMKKLAALV 230          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 4.280e-43
Identity = 91/225 (40.44%), Postives = 139/225 (61.78%), Query Frame = 1
Query:  772 VRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTE-MERLTLTTKAFPGTHTASDVDPWIREVTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAG 1443
            +RYVI CC+++RP  M +  GF+ FVG LSP YV  T+  +T + +LDAL   V+  ++  L+   +    +G+GG F G   DLT+    E+ T TVS++ +G T+ + R+ L T+AFPG+HTA D+ PWI  +T E+F  ++G +  +P  +++  TVDQG N+VNA+ ++GVPV+ C  HR+NS + W +GIAG         TCKN  + +L   + A  G
Sbjct:   15 LRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPS-VQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGC------ARTCKNKLMGDLMKKLAASVG 232          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.560e-41
Identity = 101/263 (38.40%), Postives = 157/263 (59.70%), Query Frame = 1
Query:  691 GKPAAGSRSIA-QHFIQ---PMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIRE--------VTTEFFAPIVGDANAEPAKIYVAATVDQGGNMVNAFESMGVPVLICTGHRLNSGINWGMGIAGSFVKATQTGTCKNPELRNLTAVMTALAG 1443
            GK  AGS + + + ++Q   P+  + +     R+V+ C ++MRP +M +  G++  +G L P YV  T+  +T ++IL  +  +    + T L+ H +SC KLG+ GPF G Q DLT+    E+ T +VS+I    T + R+ L T+AFPG+HTA+D++PWI +        +TTEFFA ++G+ N +P  +++A TVDQGGN+VNA  ++ V VL C  HRLNS   W +GI GS     +TG  +NP +  L   + A+ G
Sbjct:  159 GKGKAGSSTPSIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGE-NVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSI----RTG--ENPAMEKLMKRLAAVVG 414          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 7.960e-39
Identity = 133/450 (29.56%), Postives = 204/450 (45.33%), Query Frame = 3
Query: 1440 GVFSHSPCNNDAFKKLQTELDELCTALEVLRRNDTRWGSVYAMFQREVRLYKPMQAFFTENLNKP-KISARAPSPAQWQAAREVISVLQDASLVSTQVQGGRHGFVGMAINSMYVLLTSLSESTQDV-VSLDPFDGDS---EDIPVTDLLPEVQELLEILVDDMGSRGLARAEKPTEKICLMLDPRFKSCCLAVCSNGGTACSRLQPARCGRSWGILRHCICERGCRRNGECLGGSSEASPGAAPEAAAGVNPSGVNPSAGGGDPPQPAKMS--------RMERIRASLSTQVSGPTGDVDAAEDRADVAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDASGNVVAPARWPHLSLLARVYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTLN 2750
            GVFSHS  NND  K +Q   +E     E++RRNDTRW S +AM  R ++L K +  +F +N N   K+S+R     +W    EV S+L   + V+ ++QG     +   + +M  +    S     + V   P++ DS   E I V DL+ E  ++ E+++  M  + L  A  P E+IC +LDPR K C      NG    + L+ +       + +                  +EA  G+A                   + P P K          R++R+  S +           +   R  + ERE   Y+ E  A  +  F LL++W  R      A    V P   PHL+L+AR++ G+++TSCQAERNFSAL  ++  +R+  LP K+E+++ LRLNR  IP    +   + A KA      + V  V+    G  V L 
Sbjct:   86 GVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSR-----EWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGS---ADLKASAIADVKSVAKT----------------FAEADLGSASS----XXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAVVLT 506          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 2.440e-30
Identity = 129/472 (27.33%), Postives = 202/472 (42.80%), Query Frame = 3
Query: 1440 GVFSHSPCNNDAFKKLQTELDELCTALEVLRRNDTRWGSVYAMFQREVRLYKPMQAFFTENLNKP--KISARAPSPAQWQAAREVISVLQDASLVSTQVQGGRHGFVGMAINSMYVLLTSLSESTQ----------------DVVSLDPFDGD-------SEDIPVTDLLPEVQELLEILVDDMGSRGLARAEKPTEKICLMLDPRFKSCCLAVCSNGGTACSRLQPARCGRSWGILRHCICERGCRRNGECLGGSSEASPGAAPEAAAGVNPSGVNPSAGGGDPPQPA----KMSRMERIRASLSTQVSGPTGDVDAAED-----RADVAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGV-DASGNVVAPARWPHLSLLARVYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLRLNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTLN 2750
            GVFS S  NN   K+LQ    +L    E++RRNDT   S + M  R + L KP+  +F      P  K   R  S  +W    EV S+L D S ++ ++QG +   +  A+  ++ ++  L + T                 DV+  +  +         +EDI V DL  E Q + ++L++ M  +G+ +A +  E++  +LDPR K        NG         A   +                       +    P  AP     V P+            +PA    K SR+E                   A       R  + ERE   Y+ E    +   F+L+ +WN RG + V   +G V APA  P+L+ +AR++ G++ TSCQAERNFSAL  ++  +R   L RK+E+M+L+RLNRHL+     ++  +A  +A    +A+     Q  R    + L 
Sbjct:   90 GVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFT-----------------AESVPPTPAPAPVVDVQPA------------EPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVAPQTPVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARAMAAKSARESGIAQADRSNKEIDLT 528          
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.120e-28
Identity = 65/171 (38.01%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  673 SSDQKDGK-----PAAGSRSIAQHFIQPMTPTEKRKHQVRYVIMCCVDMRPFSMAHRAGFQYFVGGLSPAYVTETIHKSTLSNILDALAADVRANLITTLKDHVDSCKKLGWGGPFFGVQSDLTSTHGTEFCTLTVSFIPRGHTEMERLTLTTKAFPGTHTASDVDPWIRE 1170
            + + +DG+      A  S S+  + +  MT   K     R+V+ CC+D+RP  +    GF+ F+G LSP YVT T+ KST +  LD L   V ++++  L+   +    +G+ GPF G Q DLT+  G E+ T TV+F+ +G T+M R+ L  +AFPG+HTA D+ PWI +
Sbjct: 1256 NKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.91.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JTB8_9PHAE1.640e-5032.44Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.670e-5032.89Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JRT6_9PHAE4.820e-5040.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE2.490e-4841.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE1.040e-4739.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE4.280e-4340.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ52_9PHAE1.560e-4138.40Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KAN7_9PHAE7.960e-3929.56Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KDJ6_9PHAE2.440e-3027.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVP4_9PHAE2.120e-2838.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig175contigP-littoralis_Contig175:440032..444404 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3171
Hectar predicted targeting categoryother localisation
Exons4
Cds size1188
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig175.91.1prot_P-littoralis_Contig175.91.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig175 440450..441637 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789844.8710322-UTR-P-littoralis_Contig175:440031..4404491680789844.8710322-UTR-P-littoralis_Contig175:440031..440449Pylaiella littoralis U1_48UTRP-littoralis_Contig175 440032..440449 -
1680789844.8939505-UTR-P-littoralis_Contig175:441637..4416561680789844.8939505-UTR-P-littoralis_Contig175:441637..441656Pylaiella littoralis U1_48UTRP-littoralis_Contig175 441638..441656 -
1680789844.9041538-UTR-P-littoralis_Contig175:441924..4423001680789844.9041538-UTR-P-littoralis_Contig175:441924..442300Pylaiella littoralis U1_48UTRP-littoralis_Contig175 441925..442300 -
1680789844.9163074-UTR-P-littoralis_Contig175:442633..4431331680789844.9163074-UTR-P-littoralis_Contig175:442633..443133Pylaiella littoralis U1_48UTRP-littoralis_Contig175 442634..443133 -
1680789844.9251475-UTR-P-littoralis_Contig175:443734..4444041680789844.9251475-UTR-P-littoralis_Contig175:443734..444404Pylaiella littoralis U1_48UTRP-littoralis_Contig175 443735..444404 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789844.882461-CDS-P-littoralis_Contig175:440449..4416371680789844.882461-CDS-P-littoralis_Contig175:440449..441637Pylaiella littoralis U1_48CDSP-littoralis_Contig175 440450..441637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig175.91.1

>prot_P-littoralis_Contig175.91.1 ID=prot_P-littoralis_Contig175.91.1|Name=mRNA_P-littoralis_Contig175.91.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=396bp
MFQREVRLYKPMQAFFTENLNKPKISARAPSPAQWQAAREVISVLQDASL
VSTQVQGGRHGFVGMAINSMYVLLTSLSESTQDVVSLDPFDGDSEDIPVT
DLLPEVQELLEILVDDMGSRGLARAEKPTEKICLMLDPRFKSCCLAVCSN
GGTACSRLQPARCGRSWGILRHCICERGCRRNGECLGGSSEASPGAAPEA
AAGVNPSGVNPSAGGGDPPQPAKMSRMERIRASLSTQVSGPTGDVDAAED
RADVAEREFAAYMKEAAATNDAKFDLLKYWNARGVDGVDASGNVVAPARW
PHLSLLARVYAGVDTTSCQAERNFSALKQVLSDMRAGTLPRKIEQMLLLR
LNRHLIPGFAKVEQELAALKARHDANAKAVVAVQQAREGSTVTLN*
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mRNA from alignment at P-littoralis_Contig175:440032..444404-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig175.91.1 ID=mRNA_P-littoralis_Contig175.91.1|Name=mRNA_P-littoralis_Contig175.91.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4373bp|location=Sequence derived from alignment at P-littoralis_Contig175:440032..444404- (Pylaiella littoralis U1_48)
GGACGTACTTTTTGAAGGAAAGGGGTGTGTGTGGGCAAAAATGTGTGTGC ATAGGGGGTAGGGGGTTGACCGCAACCCACCCCTGCTGATTCTGTGATTT TCTTTTGAAAAAAAAAACACAAAACACAAAACACAAAACACAACACACCA GCTGCAAAACACACCACAACAGAACGTGCACATGAGTACCCCTATCGCCG GCGATGGCGGCGGCGGATCGGAGTCAGCAGTACCCCCAACGCCTTCATCT GGCGACCCCGACGGCGGTGTTGGAACGAGCCCGGAGACGGCAGTGTCGGT TGTTGCTGGCACTGCTGCTGCCAGCAGCAGCACCACCGCCGTGGCGGTCG GGGCTGGTTCAGGGAAGAGAAGGAAGACGTCTAACGTGTGGCACCACTTT GTGCAGTTCACGCCGGCCGACTCGGATGGCAAGAACGTCAAGTGTATAGT AGAAAAATGGCTGCCCGCGTCTGGTTTGCTGCCTGCGCGCAAGTATGTGT GTGGAGCGCGGTTCACGCACCGCGCCGCGGATAGGAAAAACAACATCAGC GCCACGGGAACCAGTGGACTAGTCAAGCACCTGCACAATGAGCACTCCAC GGTATGGGCCGCCACGGACGATGGGCGTGGATCAAGGAGGCCAGAACTAC CAGGGGTGCCATCCTACATGGTGAGGTACCGGTGCGCGCTGCGCGTTGCC GCTGTGTGTGGTGCTGTTTGAAAAAAAAAAAAAAAATTGCGGCAGATTTT TTTGTTTTCGCCGCAAAGAAGAAAAGAAAAGTATATACGTTGAATAACAT ACCCCAACAGAGCTGCCGGGGTTTTTCAGCTGCGATTTCTCTTGTTGTTG TGAGGTAGGGAGTGCATCAACCGGCCCTCCTCCAACCGCTCTTTGGACAG ATTGAATGTTGGTGGCAGACTGTGATATAGAGCAGACCAAAACTATTTTT TCCCCCTTCAGAACTGCGCTGAATAAAATTTTATTTATTGATGTAAATCA GTGGCGCTTTTATCGTCACCACTCAAGCGATATATAAAAGGCACCATGCA GACTAACTATTAGGTGTATTTTATTTTCGATTAAGTCATTTATTGTTTGG GGGGGACAATATATATATGTGTAGGTGTTTTTTTTTAAATTATTTAATTA ATTTTTGGTTTTGGGCAGGGGATATCTTGTGTGTTTATGAAGTACCATCT CATACAATTTGACGAATGACATCGAACACCTGCTGCTGCTGCTATGTTGC ATGTTCGTTGCAACCCTCCAGGAAGCTCGGATCAGAAGGACGGCAAGCCT GCAGCGGGGTCACGCTCGATCGCCCAACACTTCATCCAACCCATGACACC CACCGAGAAGAGAAAGCACCAGGTCCGATACGTCATCATGTGCTGCGTCG ACATGCGGCCGTTCTCGATGGCGCATCGGGCTGGGTTCCAGTACTTCGTC GGCGGCTTGAGCCCGGCGTACGTAACGGAGACGATACACAAGAGCACACT TTCAAACATTTTGGATGCCTTGGCCGCCGATGTTCGCGCCAACCTCATCA CGACGCTGAAGGACCACGTAGATTCCTGCAAGAAACTCGGGTGGGGCGGG CCCTTCTTTGGCGTGCAGTCGGACCTAACCAGTACGCACGGCACCGAGTT CTGCACTCTCACCGTTTCCTTCATCCCGCGGGGTCACACGGAGATGGAGC GACTGACGCTGACGACAAAGGCGTTCCCGGGTACGCACACGGCAAGCGAT GTGGACCCGTGGATCCGTGAGGTGAGTCTCTCTATTTAGTTTTTACTCCG TTGTTTTTTTTTTTTAGTTTACTCTGTTGGTTGATTGTTGATTCTAATCT GTATTTTTAGCCGTCCCGGAGTATTTTTTCACGCGTGGCAGAACTTCTAG AAGGGATTATCATTGATATGAATTTCGCAGGCAATTTATTGTATTCTATT TATTTATGATCGACACCTCTTGCGTTCGAGGACACCAATTGTCGCGTTGG TTTGTATCAACCTGTCCTCAATCGTGCCTTCATTTCTTCTGAAAAACCCA CACCCAAACCCCATGCCTGGCATACGCTGATCGTGTTCCTTTCGCGTTGA GCAGGTTACTACCGAGTTCTTCGCGCCTATCGTGGGAGACGCCAACGCTG AGCCAGCGAAGATCTACGTTGCTGCCACAGTCGACCAAGGAGGCAACATG GTGAATGCGTTTGAGAGCATGGGCGTGCCGGTCCTGATCTGCACGGGGCA TCGGCTCAACTCCGGGATCAACTGGGGAATGGGCATCGCCGGCTCCTTCG TGAAGGCAACGCAGACGGGCACGTGCAAAAACCCTGAGCTCCGCAACCTA ACCGCTGTCATGACCGCGCTTGCGGGGTCTTCAGCCATTCCCCTTGCAAC AACGACGCCTTCAAAAAGCTGCAAACGGAGCTGGACGAACTGTGCACCGC TTTGGAGGTTCTCCGCCGCAATGATACGAGGTGTGTTCTGTGTGTGGCTG TTTCTTGTTTAGACTAGCTTGGAGTTACCTAGACCTGAGTTCTGTAATGT AGCTGAGACCCAGAAACACTGCCGATAGTTGTTGCGGCGAAGTATTTCCA GCCCTGTCCGAGTGCTTCGTACGCTTGTGCTGGCTTACAGTTGCTGTTAC GTTCCCATGCATGAACACGCCGTATTATTTGTTGGTACCACCGGCACGTT GAACGATCAACTTCAACGTGCCCACCTCCCCTTTCATTCCCCTTGCAGGT GGGGGTCAGTGTATGCGATGTTTCAGCGGGAGGTGCGCCTCTACAAGCCC ATGCAGGCGTTTTTCACAGAGAACCTGAACAAGCCGAAGATCAGCGCGCG CGCGCCTAGCCCGGCGCAGTGGCAGGCTGCCCGTGAGGTTATCAGTGTCC TTCAAGACGCCTCACTGGTGAGCACGCAGGTCCAGGGTGGACGACATGGC TTTGTGGGCATGGCGATCAACTCAATGTACGTGCTGCTGACGTCGTTGTC GGAATCGACACAGGACGTCGTTAGCCTTGACCCTTTCGATGGCGACTCCG AAGATATCCCCGTGACGGACCTTCTCCCGGAGGTTCAGGAGCTGCTGGAA ATCCTAGTGGACGACATGGGATCCAGGGGCTTGGCGCGTGCTGAGAAGCC GACGGAGAAGATATGCCTGATGCTCGATCCGCGTTTCAAGTCCTGCTGCC TCGCTGTTTGTTCCAACGGGGGTACAGCCTGCAGCAGGCTGCAGCCAGCG CGGTGCGGGAGAAGTTGGGGGATTCTCCGGCACTGCATCTGCGAGCGCGG ATGTCGGAGAAACGGGGAATGCCTCGGGGGCTCTTCGGAGGCTTCTCCCG GGGCGGCACCGGAGGCGGCAGCGGGCGTGAACCCCTCGGGCGTGAACCCC TCTGCGGGAGGCGGTGACCCTCCCCAGCCGGCGAAGATGTCCAGAATGGA GAGGATCAGAGCGAGTCTAAGCACCCAGGTCTCCGGCCCCACGGGCGACG TGGATGCGGCAGAGGATCGAGCGGACGTCGCAGAGCGCGAGTTTGCCGCC TACATGAAAGAAGCGGCCGCCACCAACGACGCCAAGTTCGACCTACTGAA GTACTGGAATGCGCGGGGCGTGGATGGGGTAGACGCGTCCGGGAACGTCG TAGCGCCTGCCCGCTGGCCGCATCTGAGTTTGCTAGCACGCGTGTACGCA GGCGTAGACACCACCAGTTGTCAAGCGGAGAGGAACTTTTCCGCCCTCAA GCAGGTCCTAAGTGACATGCGTGCCGGTACCCTGCCTCGTAAGATCGAGC AGATGCTCTTGCTTAGGCTGAACAGGCACCTCATCCCAGGCTTTGCGAAA GTAGAGCAAGAGCTGGCCGCATTGAAGGCAAGGCACGACGCAAACGCAAA GGCCGTGGTTGCCGTCCAGCAAGCCAGGGAAGGGAGTACTGTCACCTTGA ACTAGGGTCGCTGGTCTTTGTGCTTTTGTTTTGCTTTGTTTTTGCTGTTG ATTTCGTCGTTTTCGTTTCAGCGTATCAGATGTATGTGTCTGGTACATTG GCTTGGGTTAGTTGTTGGTGCTTGCAGGTCATTGAGTTCTAAATTCTAAA TTCCCCCATTCCATCACTCTGTCCCACCAGTCACCATCCCATTCCATCCC ATCAGCATCGTGCTCTCATCCCATCCCATCCCATTAGCATCCTGCTCTCG TTCCATCCCATCCCATTAGCATCCTGCTCTCATCCCATCCCATCCCATCC CATCATGTATGATTCCATCCCATCCCATCGTATTACCATCAGAATGGGCG CAAATACCACCCCATTTAACCTGATGGGAACCCTAAAAATTCGGCGCCAC GTACCGCCCTGGAAAAAGGGAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig175:440032..444404-

>mRNA_P-littoralis_Contig175.91.1 ID=mRNA_P-littoralis_Contig175.91.1|Name=mRNA_P-littoralis_Contig175.91.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1188bp|location=Sequence derived from alignment at P-littoralis_Contig175:440032..444404- (Pylaiella littoralis U1_48)
ATGTTTCAGCGGGAGGTGCGCCTCTACAAGCCCATGCAGGCGTTTTTCAC
AGAGAACCTGAACAAGCCGAAGATCAGCGCGCGCGCGCCTAGCCCGGCGC
AGTGGCAGGCTGCCCGTGAGGTTATCAGTGTCCTTCAAGACGCCTCACTG
GTGAGCACGCAGGTCCAGGGTGGACGACATGGCTTTGTGGGCATGGCGAT
CAACTCAATGTACGTGCTGCTGACGTCGTTGTCGGAATCGACACAGGACG
TCGTTAGCCTTGACCCTTTCGATGGCGACTCCGAAGATATCCCCGTGACG
GACCTTCTCCCGGAGGTTCAGGAGCTGCTGGAAATCCTAGTGGACGACAT
GGGATCCAGGGGCTTGGCGCGTGCTGAGAAGCCGACGGAGAAGATATGCC
TGATGCTCGATCCGCGTTTCAAGTCCTGCTGCCTCGCTGTTTGTTCCAAC
GGGGGTACAGCCTGCAGCAGGCTGCAGCCAGCGCGGTGCGGGAGAAGTTG
GGGGATTCTCCGGCACTGCATCTGCGAGCGCGGATGTCGGAGAAACGGGG
AATGCCTCGGGGGCTCTTCGGAGGCTTCTCCCGGGGCGGCACCGGAGGCG
GCAGCGGGCGTGAACCCCTCGGGCGTGAACCCCTCTGCGGGAGGCGGTGA
CCCTCCCCAGCCGGCGAAGATGTCCAGAATGGAGAGGATCAGAGCGAGTC
TAAGCACCCAGGTCTCCGGCCCCACGGGCGACGTGGATGCGGCAGAGGAT
CGAGCGGACGTCGCAGAGCGCGAGTTTGCCGCCTACATGAAAGAAGCGGC
CGCCACCAACGACGCCAAGTTCGACCTACTGAAGTACTGGAATGCGCGGG
GCGTGGATGGGGTAGACGCGTCCGGGAACGTCGTAGCGCCTGCCCGCTGG
CCGCATCTGAGTTTGCTAGCACGCGTGTACGCAGGCGTAGACACCACCAG
TTGTCAAGCGGAGAGGAACTTTTCCGCCCTCAAGCAGGTCCTAAGTGACA
TGCGTGCCGGTACCCTGCCTCGTAAGATCGAGCAGATGCTCTTGCTTAGG
CTGAACAGGCACCTCATCCCAGGCTTTGCGAAAGTAGAGCAAGAGCTGGC
CGCATTGAAGGCAAGGCACGACGCAAACGCAAAGGCCGTGGTTGCCGTCC
AGCAAGCCAGGGAAGGGAGTACTGTCACCTTGAACTAG
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