prot_P-littoralis_Contig175.79.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig175.79.2
Unique Nameprot_P-littoralis_Contig175.79.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length447
Homology
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BLAST of mRNA_P-littoralis_Contig175.79.2 vs. uniprot
Match: A0A6H5JF99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF99_9PHAE)

HSP 1 Score: 478 bits (1229), Expect = 1.770e-164
Identity = 253/440 (57.50%), Postives = 299/440 (67.95%), Query Frame = 0 
Query:    6 TRSRTATAAAVALLTA----PSMFASALDLTVANCDDLRSLTGLSNLQEDTTLLLDVPTETFGNPDLNWIACDILTTVRIEGPYKVVVTTDLPNYNFENARFEITDGAEVTFVVDGGLSFNYALSQGSDGGAIYVDNNSAATFDVTGTTSFEGNTAQPGFQGGAVFAAGKVEFMSRVDFISNEVVHFEDSPASYGGAVGVASLGNVDFYDDVDFTANIAQSGGSGGALANFGTVKFWGRSQFLFNTAEGGDIELTTTDAELTYTEXXXXXXXXXXXXXXXXXXXXXXXSNKATEDVNGENGYGGAIYAAYGSKTEFNRRTIWHDNEAASGGALYNLGEVWLYSNGFIRGNKAVGSIKAEGGHIYNLASVVGGEPIYTGGQISFFGDKTNLREGEAKRGGAYFTGGPGSSTAYSIVPNFIDNFASEFCNDWASGNTDPPSC 441
            TRS    A AV L+ A    PS FASAL+L  ANCDDL +L   + L EDT LLLDVP+ T+GNPDLNWI+CD +TTV ++GPYK +VTTD+ NYNFENARFE+  GA++TF ++GG SFNYA SQG+DGGAIYV++ S+ATFDV    +FEGNT + G+ GG V+A            ISNE     D PA YGGAV V   G+++F   ++FT N AQSGGSGGA+ANFG++ F  +S F FNTA                                              ED NG+ G+GGAIYA YGS TEF RRTIW  +EAASGGALYNLGEV LYSNGFIRGNKA+GS+KAEGGHIYNLAS +GGEP YTGGQI   GDK N REGEAKRGGAYF+GGPGSS +Y   PN  DN ASE+C+D+ASGNTDPP+C
Sbjct:    3 TRSDAFLATAVVLMAAAGSCPSTFASALELIAANCDDLSALP--TTLTEDTNLLLDVPSITYGNPDLNWISCDTITTVHVDGPYKFIVTTDMDNYNFENARFEVKGGADLTFAIEGGFSFNYAESQGTDGGAIYVESGSSATFDVPSKVNFEGNTVEAGYSGGVVYAXXXXXXXXXXXXISNEARSSGDEPAGYGGAVAVGPEGSLEFQGALEFTDNKAQSGGSGGAIANFGSLVFRRKSYFWFNTA---------------------------------------------AEDANGDGGFGGAIYAGYGSTTEFFRRTIWFYSEAASGGALYNLGEVMLYSNGFIRGNKAMGSVKAEGGHIYNLASAIGGEPTYTGGQIQLNGDKVNFREGEAKRGGAYFSGGPGSSLSYHTAPNLFDNSASEYCDDYASGNTDPPTC 395
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.79.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JF99_9PHAE1.770e-16457.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig175contigP-littoralis_Contig175:407459..418244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig175.79.2mRNA_P-littoralis_Contig175.79.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig175 406235..418385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig175.79.2 ID=prot_P-littoralis_Contig175.79.2|Name=mRNA_P-littoralis_Contig175.79.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=447bp
MTLKWTRSRTATAAAVALLTAPSMFASALDLTVANCDDLRSLTGLSNLQE
DTTLLLDVPTETFGNPDLNWIACDILTTVRIEGPYKVVVTTDLPNYNFEN
ARFEITDGAEVTFVVDGGLSFNYALSQGSDGGAIYVDNNSAATFDVTGTT
SFEGNTAQPGFQGGAVFAAGKVEFMSRVDFISNEVVHFEDSPASYGGAVG
VASLGNVDFYDDVDFTANIAQSGGSGGALANFGTVKFWGRSQFLFNTAEG
GDIELTTTDAELTYTESRGSGGAIANFGTLIFEKRSEFTSNKATEDVNGE
NGYGGAIYAAYGSKTEFNRRTIWHDNEAASGGALYNLGEVWLYSNGFIRG
NKAVGSIKAEGGHIYNLASVVGGEPIYTGGQISFFGDKTNLREGEAKRGG
AYFTGGPGSSTAYSIVPNFIDNFASEFCNDWASGNTDPPSCIVPRG*
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